RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PDE3AQ14432 1141 aa17.05■□□□□ 0.32
CPSF4-206ENST00000441580 SLIT3O75094 1523 aa17.05■□□□□ 0.32
CPSF4-206ENST00000441580 MAP3K19Q56UN5 1328 aa17.04■□□□□ 0.32
CPSF4-206ENST00000441580 FBLN1P23142 703 aa17.04■□□□□ 0.32
CPSF4-206ENST00000441580 CANXP27824 592 aaKnown RBP17.04■□□□□ 0.32
CPSF4-206ENST00000441580 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
CPSF4-206ENST00000441580 HMOX1P09601 288 aa17.03■□□□□ 0.32
CPSF4-206ENST00000441580 KDRP35968 1356 aa17.02■□□□□ 0.32
CPSF4-206ENST00000441580 STRCP1A6NGW2 1772 aa17.02■□□□□ 0.32
CPSF4-206ENST00000441580 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
CPSF4-206ENST00000441580 MST1RQ04912 1400 aa17.02■□□□□ 0.31
CPSF4-206ENST00000441580 C1orf167Q5SNV9 1468 aa17.01■□□□□ 0.31
CPSF4-206ENST00000441580 NLRP6P59044 892 aa17.01■□□□□ 0.31
CPSF4-206ENST00000441580 AAMPQ13685 434 aa17.01■□□□□ 0.31
CPSF4-206ENST00000441580 LMTK3Q96Q04 1460 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 LRRC37A3O60309 1634 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 BCAR3O75815 825 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 ZNF428Q96B54 188 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 IFT57Q9NWB7 429 aa17■□□□□ 0.31
CPSF4-206ENST00000441580 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
CPSF4-206ENST00000441580 MS4A1P11836 297 aa16.99■□□□□ 0.31
CPSF4-206ENST00000441580 AMPHP49418 695 aa16.99■□□□□ 0.31
CPSF4-206ENST00000441580 PROSER2Q86WR7 435 aaPredicted RBP16.99■□□□□ 0.31
CPSF4-206ENST00000441580 ALS2Q96Q42 1657 aa16.98■□□□□ 0.31
CPSF4-206ENST00000441580 GNAI1P63096 354 aa16.98■□□□□ 0.31
CPSF4-206ENST00000441580 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
CPSF4-206ENST00000441580 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
CPSF4-206ENST00000441580 HSP90AB2PQ58FF8 381 aa16.97■□□□□ 0.31
CPSF4-206ENST00000441580 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
CPSF4-206ENST00000441580 KCNH5Q8NCM2 988 aa16.97■□□□□ 0.31
CPSF4-206ENST00000441580 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
CPSF4-206ENST00000441580 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
CPSF4-206ENST00000441580 PAK3O75914 559 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-206ENST00000441580 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
CPSF4-206ENST00000441580 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-206ENST00000441580 C19orf44Q9H6X5 657 aa16.96■□□□□ 0.31
CPSF4-206ENST00000441580 TMEM94Q12767 1356 aa16.96■□□□□ 0.31
CPSF4-206ENST00000441580 CAMTA1Q9Y6Y1 1673 aa16.96■□□□□ 0.31
CPSF4-206ENST00000441580 ABCC6O95255 1503 aa16.96■□□□□ 0.3
CPSF4-206ENST00000441580 SOX12O15370 315 aa16.95■□□□□ 0.3
CPSF4-206ENST00000441580 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
CPSF4-206ENST00000441580 ALDH1L2Q3SY69 923 aa16.95■□□□□ 0.3
CPSF4-206ENST00000441580 HOXC9P31274 260 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 PSME1Q06323 249 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 USP19O94966 1318 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
CPSF4-206ENST00000441580 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
CPSF4-206ENST00000441580 AEBP1Q8IUX7 1158 aa16.93■□□□□ 0.3
CPSF4-206ENST00000441580 MED1Q15648 1581 aaPredicted RBP16.93■□□□□ 0.3
CPSF4-206ENST00000441580 MSH6P52701 1360 aa16.92■□□□□ 0.3
CPSF4-206ENST00000441580 ZNF853P0CG23 659 aa16.92■□□□□ 0.3
CPSF4-206ENST00000441580 HAP1P54257 671 aaPredicted RBP16.92■□□□□ 0.3
CPSF4-206ENST00000441580 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
CPSF4-206ENST00000441580 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
CPSF4-206ENST00000441580 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
CPSF4-206ENST00000441580 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
CPSF4-206ENST00000441580 ATF3P18847 181 aa16.91■□□□□ 0.3
CPSF4-206ENST00000441580 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
CPSF4-206ENST00000441580 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
CPSF4-206ENST00000441580 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-206ENST00000441580 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
CPSF4-206ENST00000441580 CLUAP1Q96AJ1 413 aa16.9■□□□□ 0.3
CPSF4-206ENST00000441580 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
CPSF4-206ENST00000441580 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
CPSF4-206ENST00000441580 IPO8O15397 1037 aaKnown RBP16.89■□□□□ 0.29
CPSF4-206ENST00000441580 CADPS2Q86UW7 1296 aa16.89■□□□□ 0.29
CPSF4-206ENST00000441580 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 IP6K1Q92551 441 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 BCL2L13Q9BXK5 485 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
CPSF4-206ENST00000441580 KIAA0232Q92628 1395 aa16.88■□□□□ 0.29
CPSF4-206ENST00000441580 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
CPSF4-206ENST00000441580 DZIP1LQ8IYY4 767 aaKnown RBP16.87■□□□□ 0.29
CPSF4-206ENST00000441580 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 ORAI2Q96SN7 254 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 EYA1Q99502 592 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 CRB1P82279 1406 aa16.87■□□□□ 0.29
CPSF4-206ENST00000441580 LMO7Q8WWI1 1683 aa16.86■□□□□ 0.29
CPSF4-206ENST00000441580 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
CPSF4-206ENST00000441580 ATF7IPQ6VMQ6 1270 aa16.86■□□□□ 0.29
CPSF4-206ENST00000441580 THUMPD2Q9BTF0 503 aaKnown RBP16.86■□□□□ 0.29
CPSF4-206ENST00000441580 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
CPSF4-206ENST00000441580 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
CPSF4-206ENST00000441580 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
CPSF4-206ENST00000441580 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
CPSF4-206ENST00000441580 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
CPSF4-206ENST00000441580 PXDNQ92626 1479 aa16.85■□□□□ 0.29
CPSF4-206ENST00000441580 FOXO3O43524 673 aa16.84■□□□□ 0.29
CPSF4-206ENST00000441580 HSPA2P54652 639 aa16.84■□□□□ 0.29
CPSF4-206ENST00000441580 KRT28Q7Z3Y7 464 aa16.84■□□□□ 0.29
CPSF4-206ENST00000441580 DDX19BQ9UMR2 479 aa16.84■□□□□ 0.29
CPSF4-206ENST00000441580 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
CPSF4-206ENST00000441580 OVOS2A0A0G2JMS6 1433 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms