RNA–Protein interactions for RNA: ENST00000441012.6

NR1H3-211, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-211ENST00000441012 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
NR1H3-211ENST00000441012 CDK12Q9NYV4 1490 aaPredicted RBP19.51■□□□□ 0.71
NR1H3-211ENST00000441012 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
NR1H3-211ENST00000441012 CANXP27824 592 aaKnown RBP19.51■□□□□ 0.71
NR1H3-211ENST00000441012 POLKQ9UBT6 870 aa19.51■□□□□ 0.71
NR1H3-211ENST00000441012 MON2Q7Z3U7 1717 aa19.5■□□□□ 0.71
NR1H3-211ENST00000441012 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
NR1H3-211ENST00000441012 PMFBP1Q8TBY8 1022 aa19.49■□□□□ 0.71
NR1H3-211ENST00000441012 NUDT16Q96DE0 195 aaKnown RBP19.49■□□□□ 0.71
NR1H3-211ENST00000441012 ZBTB47Q9UFB7 747 aaPredicted RBP19.49■□□□□ 0.71
NR1H3-211ENST00000441012 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
NR1H3-211ENST00000441012 ZNF772Q68DY9 489 aaPredicted RBP19.48■□□□□ 0.71
NR1H3-211ENST00000441012 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
NR1H3-211ENST00000441012 NUTM2BA6NNL0 878 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-211ENST00000441012 NUTM2EB1AL46 878 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-211ENST00000441012 FAM161AQ3B820 660 aa19.47■□□□□ 0.71
NR1H3-211ENST00000441012 NUTM2AQ8IVF1 878 aaPredicted RBP19.47■□□□□ 0.71
NR1H3-211ENST00000441012 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
NR1H3-211ENST00000441012 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
NR1H3-211ENST00000441012 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
NR1H3-211ENST00000441012 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
NR1H3-211ENST00000441012 NEFMP07197 916 aa19.45■□□□□ 0.7
NR1H3-211ENST00000441012 PANK1Q8TE04 598 aa19.45■□□□□ 0.7
NR1H3-211ENST00000441012 LRRC59Q96AG4 307 aaKnown RBP19.45■□□□□ 0.7
NR1H3-211ENST00000441012 DDRGK1Q96HY6 314 aa19.45■□□□□ 0.7
NR1H3-211ENST00000441012 COG6Q9Y2V7 657 aa19.45■□□□□ 0.7
NR1H3-211ENST00000441012 RIPK4P57078 832 aa19.44■□□□□ 0.7
NR1H3-211ENST00000441012 ZKSCAN2Q63HK3 967 aa19.44■□□□□ 0.7
NR1H3-211ENST00000441012 BRPF1P55201 1214 aaPredicted RBP19.43■□□□□ 0.7
NR1H3-211ENST00000441012 PLEKHG3A1L390 1219 aa19.43■□□□□ 0.7
NR1H3-211ENST00000441012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
NR1H3-211ENST00000441012 FRAT1Q92837 279 aaPredicted RBP19.43■□□□□ 0.7
NR1H3-211ENST00000441012 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
NR1H3-211ENST00000441012 IGHDP01880 384 aa19.42■□□□□ 0.7
NR1H3-211ENST00000441012 IL13P35225 146 aa19.42■□□□□ 0.7
NR1H3-211ENST00000441012 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
NR1H3-211ENST00000441012 COG3Q96JB2 828 aa19.42■□□□□ 0.7
NR1H3-211ENST00000441012 MVPQ14764 893 aaKnown RBP19.41■□□□□ 0.7
NR1H3-211ENST00000441012 NFE2L2Q16236 605 aa19.41■□□□□ 0.7
NR1H3-211ENST00000441012 AFF2P51816 1311 aa19.41■□□□□ 0.7
NR1H3-211ENST00000441012 TOPAZ1Q8N9V7 1692 aa19.41■□□□□ 0.7
NR1H3-211ENST00000441012 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
NR1H3-211ENST00000441012 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
NR1H3-211ENST00000441012 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
NR1H3-211ENST00000441012 C8orf34Q49A92 452 aa19.4■□□□□ 0.7
NR1H3-211ENST00000441012 COL22A1Q8NFW1 1626 aaPredicted RBP19.4■□□□□ 0.7
NR1H3-211ENST00000441012 DZIP1LQ8IYY4 767 aaKnown RBP19.4■□□□□ 0.7
NR1H3-211ENST00000441012 ORAI2Q96SN7 254 aa19.4■□□□□ 0.7
NR1H3-211ENST00000441012 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
NR1H3-211ENST00000441012 RLBP1P12271 317 aa19.39■□□□□ 0.69
NR1H3-211ENST00000441012 RWDD1Q9H446 243 aaPredicted RBP19.39■□□□□ 0.69
NR1H3-211ENST00000441012 MARF1Q9Y4F3 1742 aaKnown RBP19.39■□□□□ 0.69
NR1H3-211ENST00000441012 PRR36Q9H6K5 1346 aa19.38■□□□□ 0.69
NR1H3-211ENST00000441012 IPO8O15397 1037 aaKnown RBP19.38■□□□□ 0.69
NR1H3-211ENST00000441012 PRKAR2BP31323 418 aa19.38■□□□□ 0.69
NR1H3-211ENST00000441012 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
NR1H3-211ENST00000441012 NME9Q86XW9 330 aa19.38■□□□□ 0.69
NR1H3-211ENST00000441012 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
NR1H3-211ENST00000441012 SOS2Q07890 1332 aaPredicted RBP19.37■□□□□ 0.69
NR1H3-211ENST00000441012 RXRBP28702 533 aa19.37■□□□□ 0.69
NR1H3-211ENST00000441012 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
NR1H3-211ENST00000441012 C8orf37Q96NL8 207 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 SMC4Q9NTJ3 1288 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 FMN2Q9NZ56 1722 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 ATF7IPQ6VMQ6 1270 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 DDX19BQ9UMR2 479 aa19.36■□□□□ 0.69
NR1H3-211ENST00000441012 RGPD8O14715 1765 aaPredicted RBP19.35■□□□□ 0.69
NR1H3-211ENST00000441012 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
NR1H3-211ENST00000441012 IFT57Q9NWB7 429 aa19.35■□□□□ 0.69
NR1H3-211ENST00000441012 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
NR1H3-211ENST00000441012 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
NR1H3-211ENST00000441012 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
NR1H3-211ENST00000441012 TTC21BQ7Z4L5 1316 aa19.34■□□□□ 0.69
NR1H3-211ENST00000441012 SKAP1Q86WV1 359 aa19.34■□□□□ 0.69
NR1H3-211ENST00000441012 EMILIN1Q9Y6C2 1016 aa19.34■□□□□ 0.69
NR1H3-211ENST00000441012 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
NR1H3-211ENST00000441012 SSH2Q76I76 1423 aa19.33■□□□□ 0.69
NR1H3-211ENST00000441012 ZNF853P0CG23 659 aa19.33■□□□□ 0.69
NR1H3-211ENST00000441012 GNAI1P63096 354 aa19.33■□□□□ 0.69
NR1H3-211ENST00000441012 HDAC1Q13547 482 aaPredicted RBP19.33■□□□□ 0.69
NR1H3-211ENST00000441012 USP6P35125 1406 aa19.33■□□□□ 0.68
NR1H3-211ENST00000441012 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
NR1H3-211ENST00000441012 ARHGAP45Q92619 1136 aa19.33■□□□□ 0.68
NR1H3-211ENST00000441012 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.68
NR1H3-211ENST00000441012 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
NR1H3-211ENST00000441012 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
NR1H3-211ENST00000441012 RGS12O14924 1447 aa19.32■□□□□ 0.68
NR1H3-211ENST00000441012 TRIM27P14373 513 aa19.32■□□□□ 0.68
NR1H3-211ENST00000441012 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
NR1H3-211ENST00000441012 PXDNQ92626 1479 aa19.32■□□□□ 0.68
NR1H3-211ENST00000441012 VIRMAQ69YN4 1812 aaKnown RBP19.31■□□□□ 0.68
NR1H3-211ENST00000441012 PPM1GO15355 546 aaPredicted RBP19.31■□□□□ 0.68
NR1H3-211ENST00000441012 ADAMTS2O95450 1211 aa19.31■□□□□ 0.68
NR1H3-211ENST00000441012 RGS3P49796 1198 aa19.31■□□□□ 0.68
NR1H3-211ENST00000441012 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
NR1H3-211ENST00000441012 TNNQ9UQP3 1299 aa19.3■□□□□ 0.68
NR1H3-211ENST00000441012 ACEP12821 1306 aa19.3■□□□□ 0.68
NR1H3-211ENST00000441012 ESCO1Q5FWF5 840 aa19.29■□□□□ 0.68
NR1H3-211ENST00000441012 PHACTR3Q96KR7 559 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms