RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
SMAD3-202ENST00000439724 TSR2Q969E8 191 aaKnown RBP15.22■□□□□ 0.03
SMAD3-202ENST00000439724 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
SMAD3-202ENST00000439724 KDM2BQ8NHM5 1336 aa15.21■□□□□ 0.02
SMAD3-202ENST00000439724 CANXP27824 592 aaKnown RBP15.2■□□□□ 0.02
SMAD3-202ENST00000439724 HSP90AB2PQ58FF8 381 aa15.2■□□□□ 0.02
SMAD3-202ENST00000439724 NLRP6P59044 892 aa15.19■□□□□ 0.02
SMAD3-202ENST00000439724 AAMPQ13685 434 aa15.19■□□□□ 0.02
SMAD3-202ENST00000439724 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
SMAD3-202ENST00000439724 KIF1AQ12756 1690 aa15.18■□□□□ 0.02
SMAD3-202ENST00000439724 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 IFT57Q9NWB7 429 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 RTL1A6NKG5 1358 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 KDRP35968 1356 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 TCERG1O14776 1098 aaKnown RBP15.17■□□□□ 0.02
SMAD3-202ENST00000439724 ZNF853P0CG23 659 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 GNAI1P63096 354 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 ABTB2Q8N961 1025 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 FRAT1Q92837 279 aaPredicted RBP15.17■□□□□ 0.02
SMAD3-202ENST00000439724 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
SMAD3-202ENST00000439724 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
SMAD3-202ENST00000439724 LTN1O94822 1766 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 SOX12O15370 315 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 MS4A1P11836 297 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 AMPHP49418 695 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 PANK1Q8TE04 598 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
SMAD3-202ENST00000439724 NFAT5O94916 1531 aa15.15■□□□□ 0.02
SMAD3-202ENST00000439724 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
SMAD3-202ENST00000439724 ALDH1L2Q3SY69 923 aa15.15■□□□□ 0.02
SMAD3-202ENST00000439724 ZKSCAN2Q63HK3 967 aa15.15■□□□□ 0.02
SMAD3-202ENST00000439724 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
SMAD3-202ENST00000439724 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
SMAD3-202ENST00000439724 ESCO1Q5FWF5 840 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 PROSER2Q86WR7 435 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-202ENST00000439724 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 COG6Q9Y2V7 657 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 NCOA3Q9Y6Q9 1424 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
SMAD3-202ENST00000439724 STRCP1A6NGW2 1772 aa15.14■□□□□ 0.01
SMAD3-202ENST00000439724 PAK3O75914 559 aaPredicted RBP15.13■□□□□ 0.01
SMAD3-202ENST00000439724 HOXC9P31274 260 aa15.13■□□□□ 0.01
SMAD3-202ENST00000439724 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
SMAD3-202ENST00000439724 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
SMAD3-202ENST00000439724 DCCP43146 1447 aa15.13■□□□□ 0.01
SMAD3-202ENST00000439724 KIF16BQ96L93 1317 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 RLBP1P12271 317 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 BRPF1P55201 1214 aaPredicted RBP15.12■□□□□ 0.01
SMAD3-202ENST00000439724 SLIT3O75094 1523 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 C1orf167Q5SNV9 1468 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 PSME1Q06323 249 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
SMAD3-202ENST00000439724 DZIP1LQ8IYY4 767 aaKnown RBP15.11■□□□□ 0.01
SMAD3-202ENST00000439724 EYA1Q99502 592 aa15.11■□□□□ 0.01
SMAD3-202ENST00000439724 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
SMAD3-202ENST00000439724 TNNQ9UQP3 1299 aa15.11■□□□□ 0.01
SMAD3-202ENST00000439724 MST1RQ04912 1400 aa15.1■□□□□ 0.01
SMAD3-202ENST00000439724 FAM83GA6ND36 823 aa15.1■□□□□ 0.01
SMAD3-202ENST00000439724 MVPQ14764 893 aaKnown RBP15.1■□□□□ 0.01
SMAD3-202ENST00000439724 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
SMAD3-202ENST00000439724 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
SMAD3-202ENST00000439724 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
SMAD3-202ENST00000439724 VAMP4O75379 141 aa15.09■□□□□ 0.01
SMAD3-202ENST00000439724 TRIM27P14373 513 aa15.09■□□□□ 0.01
SMAD3-202ENST00000439724 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
SMAD3-202ENST00000439724 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
SMAD3-202ENST00000439724 LRRC37A3O60309 1634 aa15.09■□□□□ 0.01
SMAD3-202ENST00000439724 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0.01
SMAD3-202ENST00000439724 TMEM94Q12767 1356 aa15.08■□□□□ 0
SMAD3-202ENST00000439724 GAS2L2Q8NHY3 880 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 IP6K1Q92551 441 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
SMAD3-202ENST00000439724 CRB1P82279 1406 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 ALS2Q96Q42 1657 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 USP19O94966 1318 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 DCTN1Q14203 1278 aa15.07■□□□□ 0
SMAD3-202ENST00000439724 CHL1O00533 1208 aa15.06■□□□□ 0
SMAD3-202ENST00000439724 FOXO3O43524 673 aa15.06■□□□□ 0
SMAD3-202ENST00000439724 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
SMAD3-202ENST00000439724 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
SMAD3-202ENST00000439724 TSPYL6Q8N831 410 aa15.06■□□□□ 0
SMAD3-202ENST00000439724 KIAA0232Q92628 1395 aa15.06■□□□□ 0
SMAD3-202ENST00000439724 HTATSF1O43719 755 aaKnown RBP15.05■□□□□ -0
SMAD3-202ENST00000439724 IGHDP01880 384 aa15.05■□□□□ -0
SMAD3-202ENST00000439724 MRPL50Q8N5N7 158 aaKnown RBP15.05■□□□□ -0
SMAD3-202ENST00000439724 ARHGAP45Q92619 1136 aa15.05■□□□□ -0
SMAD3-202ENST00000439724 DDX19BQ9UMR2 479 aa15.05■□□□□ -0
SMAD3-202ENST00000439724 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
SMAD3-202ENST00000439724 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
SMAD3-202ENST00000439724 ATF3P18847 181 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 MCM10Q7L590 875 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 KRT28Q7Z3Y7 464 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 C8orf58Q8NAV2 365 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 STRCQ7RTU9 1775 aa15.03■□□□□ -0
SMAD3-202ENST00000439724 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms