RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NFE2L2Q16236 605 aa12.27□□□□□ -0.44
CDC42SE1-202ENST00000439374 HSP90AB2PQ58FF8 381 aa12.27□□□□□ -0.44
CDC42SE1-202ENST00000439374 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
CDC42SE1-202ENST00000439374 GDPD2Q9HCC8 539 aa12.27□□□□□ -0.45
CDC42SE1-202ENST00000439374 KIF16BQ96L93 1317 aa12.27□□□□□ -0.45
CDC42SE1-202ENST00000439374 POGZQ7Z3K3 1410 aa12.27□□□□□ -0.45
CDC42SE1-202ENST00000439374 UQCRHLA0A096LP55 91 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 F6X3S4 739 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 WASLO00401 505 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 FOXO3O43524 673 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 UQCRHP07919 91 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 GNAI1P63096 354 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 C17orf53Q8N3J3 647 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 SYNMO15061 1565 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
CDC42SE1-202ENST00000439374 CHD1LQ86WJ1 897 aa12.25□□□□□ -0.45
CDC42SE1-202ENST00000439374 PLEKHF1Q96S99 279 aa12.25□□□□□ -0.45
CDC42SE1-202ENST00000439374 CHMP3Q9Y3E7 222 aa12.25□□□□□ -0.45
CDC42SE1-202ENST00000439374 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
CDC42SE1-202ENST00000439374 ABCA6Q8N139 1617 aa12.25□□□□□ -0.45
CDC42SE1-202ENST00000439374 SYCE3A1L190 88 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 TSHZ3Q63HK5 1081 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 TSPOAP1O95153 1857 aa12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 EIF2S2P20042 333 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 YTHDC2Q9H6S0 1430 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-202ENST00000439374 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 NLRP6P59044 892 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 TET3O43151 1660 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 VAMP4O75379 141 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 TSPYL4Q9UJ04 414 aa12.23□□□□□ -0.45
CDC42SE1-202ENST00000439374 ZGPATQ8N5A5 531 aaKnown RBP12.22□□□□□ -0.45
CDC42SE1-202ENST00000439374 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
CDC42SE1-202ENST00000439374 RNF17Q9BXT8 1623 aaKnown RBP12.22□□□□□ -0.45
CDC42SE1-202ENST00000439374 EFCAB6Q5THR3 1501 aa12.22□□□□□ -0.45
CDC42SE1-202ENST00000439374 CBX1P83916 185 aa12.21□□□□□ -0.45
CDC42SE1-202ENST00000439374 CEP152O94986 1710 aa12.21□□□□□ -0.45
CDC42SE1-202ENST00000439374 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.46
CDC42SE1-202ENST00000439374 OTUD7AQ8TE49 926 aaPredicted RBP12.21□□□□□ -0.46
CDC42SE1-202ENST00000439374 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 PPRC1Q5VV67 1664 aaKnown RBP12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 MYOM2P54296 1465 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 ZSCAN30Q86W11 494 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 KIF1BO60333 1816 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 FKBP5Q13451 457 aaPredicted RBP12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
CDC42SE1-202ENST00000439374 ACEP12821 1306 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 SBNO2Q9Y2G9 1366 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 LMOD3Q0VAK6 560 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 BAG4O95429 457 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 EIF4A2Q14240 407 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
CDC42SE1-202ENST00000439374 PPIP5K1Q6PFW1 1433 aa12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 IL13P35225 146 aa12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 STK31Q9BXU1 1019 aa12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 METP08581 1390 aa12.18□□□□□ -0.46
CDC42SE1-202ENST00000439374 IQGAP1P46940 1657 aa12.17□□□□□ -0.46
CDC42SE1-202ENST00000439374 MEIS3Q99687 375 aa12.17□□□□□ -0.46
CDC42SE1-202ENST00000439374 ZBTB7BO15156 539 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-202ENST00000439374 MAP4K4O95819 1239 aaPredicted RBP12.17□□□□□ -0.46
CDC42SE1-202ENST00000439374 ABCC3O15438 1527 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 NSD2O96028 1365 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 ZBTB9Q96C00 473 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 KIDINS220Q9ULH0 1771 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 RIMS2Q9UQ26 1411 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 NUCB1Q02818 461 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 HDAC1Q13547 482 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 G2E3Q7L622 706 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 PDCL3Q9H2J4 239 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 ANXA1P04083 346 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 CT47B1P0C2W7 299 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 SMC5Q8IY18 1101 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 SPC24Q8NBT2 197 aa12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-202ENST00000439374 TPM2P07951 284 aa12.15□□□□□ -0.46
CDC42SE1-202ENST00000439374 OS9Q13438 667 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms