RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 ITSN1Q15811 1721 aa15.39■□□□□ 0.05
HDAC8-214ENST00000439122 LTKP29376 864 aa15.39■□□□□ 0.05
HDAC8-214ENST00000439122 GNAI1P63096 354 aa15.39■□□□□ 0.05
HDAC8-214ENST00000439122 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
HDAC8-214ENST00000439122 ADAMTS13Q76LX8 1427 aa15.39■□□□□ 0.05
HDAC8-214ENST00000439122 AKAP12Q02952 1782 aa15.38■□□□□ 0.05
HDAC8-214ENST00000439122 UPF2Q9HAU5 1272 aaKnown RBP15.38■□□□□ 0.05
HDAC8-214ENST00000439122 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
HDAC8-214ENST00000439122 IFT57Q9NWB7 429 aa15.38■□□□□ 0.05
HDAC8-214ENST00000439122 ELL2O00472 640 aaPredicted RBP15.38■□□□□ 0.05
HDAC8-214ENST00000439122 CEBPAP49715 358 aaPredicted RBP15.38■□□□□ 0.05
HDAC8-214ENST00000439122 C3P01024 1663 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 VAMP4O75379 141 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 TSPYL6Q8N831 410 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 SLC26A8Q96RN1 970 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 MBIPQ9NS73 344 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 ACEP12821 1306 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 BCL11AQ9H165 835 aa15.37■□□□□ 0.05
HDAC8-214ENST00000439122 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
HDAC8-214ENST00000439122 TTC21BQ7Z4L5 1316 aa15.36■□□□□ 0.05
HDAC8-214ENST00000439122 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
HDAC8-214ENST00000439122 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-214ENST00000439122 NFKBIBQ15653 356 aa15.35■□□□□ 0.05
HDAC8-214ENST00000439122 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
HDAC8-214ENST00000439122 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-214ENST00000439122 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
HDAC8-214ENST00000439122 CFAP44Q96MT7 982 aa15.34■□□□□ 0.05
HDAC8-214ENST00000439122 EID1Q9Y6B2 187 aa15.34■□□□□ 0.05
HDAC8-214ENST00000439122 DCTN1Q14203 1278 aa15.34■□□□□ 0.05
HDAC8-214ENST00000439122 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
HDAC8-214ENST00000439122 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
HDAC8-214ENST00000439122 DLG5Q8TDM6 1919 aa15.34■□□□□ 0.05
HDAC8-214ENST00000439122 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
HDAC8-214ENST00000439122 BECN1Q14457 450 aa15.33■□□□□ 0.04
HDAC8-214ENST00000439122 SULT6B1Q6IMI4 303 aa15.33■□□□□ 0.04
HDAC8-214ENST00000439122 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.04
HDAC8-214ENST00000439122 PLEKHG3A1L390 1219 aa15.32■□□□□ 0.04
HDAC8-214ENST00000439122 SOX12O15370 315 aa15.32■□□□□ 0.04
HDAC8-214ENST00000439122 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
HDAC8-214ENST00000439122 ARHGAP45Q92619 1136 aa15.32■□□□□ 0.04
HDAC8-214ENST00000439122 TBC1D32Q96NH3 1257 aa15.32■□□□□ 0.04
HDAC8-214ENST00000439122 USP6P35125 1406 aa15.31■□□□□ 0.04
HDAC8-214ENST00000439122 AMOTL2Q9Y2J4 779 aa15.31■□□□□ 0.04
HDAC8-214ENST00000439122 PTPRUQ92729 1446 aa15.3■□□□□ 0.04
HDAC8-214ENST00000439122 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
HDAC8-214ENST00000439122 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
HDAC8-214ENST00000439122 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 OVOS2A0A0J9YW53 1432 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 PTCH1Q13635 1447 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 OVOS2Q6IE36 1432 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 NRKQ7Z2Y5 1582 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 NUCB1Q02818 461 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 LNPKQ9C0E8 428 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
HDAC8-214ENST00000439122 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
HDAC8-214ENST00000439122 PIK3R4Q99570 1358 aa15.27■□□□□ 0.04
HDAC8-214ENST00000439122 CHD1LQ86WJ1 897 aa15.27■□□□□ 0.03
HDAC8-214ENST00000439122 ABCC4O15439 1325 aa15.27■□□□□ 0.03
HDAC8-214ENST00000439122 MCM10Q7L590 875 aa15.26■□□□□ 0.03
HDAC8-214ENST00000439122 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-214ENST00000439122 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
HDAC8-214ENST00000439122 API5Q9BZZ5 524 aaKnown RBP15.26■□□□□ 0.03
HDAC8-214ENST00000439122 SLKQ9H2G2 1235 aaPredicted RBP15.26■□□□□ 0.03
HDAC8-214ENST00000439122 TBX22Q9Y458 520 aa15.26■□□□□ 0.03
HDAC8-214ENST00000439122 ANKRD45Q5TZF3 282 aa15.25■□□□□ 0.03
HDAC8-214ENST00000439122 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
HDAC8-214ENST00000439122 USP31Q70CQ4 1352 aa15.25■□□□□ 0.03
HDAC8-214ENST00000439122 PEAK1Q9H792 1746 aa15.24■□□□□ 0.03
HDAC8-214ENST00000439122 THEMISQ8N1K5 641 aaPredicted RBP15.24■□□□□ 0.03
HDAC8-214ENST00000439122 GCC1Q96CN9 775 aa15.24■□□□□ 0.03
HDAC8-214ENST00000439122 SLIT1O75093 1534 aa15.24■□□□□ 0.03
HDAC8-214ENST00000439122 SSH2Q76I76 1423 aa15.24■□□□□ 0.03
HDAC8-214ENST00000439122 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 TTC21AQ8NDW8 1320 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 KRT24Q2M2I5 525 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 TBC1D2Q9BYX2 928 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 ARHGAP23Q9P227 1491 aa15.23■□□□□ 0.03
HDAC8-214ENST00000439122 CHL1O00533 1208 aa15.22■□□□□ 0.03
HDAC8-214ENST00000439122 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
HDAC8-214ENST00000439122 GSE1Q14687 1217 aa15.22■□□□□ 0.03
HDAC8-214ENST00000439122 SIRT2Q8IXJ6 389 aa15.22■□□□□ 0.03
HDAC8-214ENST00000439122 AMPHP49418 695 aa15.21■□□□□ 0.02
HDAC8-214ENST00000439122 DIP2AQ14689 1571 aa15.2■□□□□ 0.02
HDAC8-214ENST00000439122 FER1L4A9Z1Z3 1794 aa15.2■□□□□ 0.02
HDAC8-214ENST00000439122 RGPD8O14715 1765 aaPredicted RBP15.2■□□□□ 0.02
HDAC8-214ENST00000439122 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
HDAC8-214ENST00000439122 SBNO1A3KN83 1393 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 FLT4P35916 1363 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 FOXO3O43524 673 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
HDAC8-214ENST00000439122 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
HDAC8-214ENST00000439122 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
HDAC8-214ENST00000439122 NLRP6P59044 892 aa15.18■□□□□ 0.02
HDAC8-214ENST00000439122 SPRYD3Q8NCJ5 442 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms