RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 RGPD1P0DJD0 1748 aa21.82■■□□□ 1.08
GSE1-206ENST00000438180 AMPHP49418 695 aa21.82■■□□□ 1.08
GSE1-206ENST00000438180 NFE2L2Q16236 605 aa21.82■■□□□ 1.08
GSE1-206ENST00000438180 SOX12O15370 315 aa21.81■■□□□ 1.08
GSE1-206ENST00000438180 CALD1Q05682 793 aaKnown RBP21.81■■□□□ 1.08
GSE1-206ENST00000438180 LMOD3Q0VAK6 560 aa21.81■■□□□ 1.08
GSE1-206ENST00000438180 RTL1A6NKG5 1358 aa21.81■■□□□ 1.08
GSE1-206ENST00000438180 TRIM35Q9UPQ4 493 aa21.8■■□□□ 1.08
GSE1-206ENST00000438180 ARHGEF10O15013 1369 aa21.8■■□□□ 1.08
GSE1-206ENST00000438180 CADPS2Q86UW7 1296 aa21.8■■□□□ 1.08
GSE1-206ENST00000438180 CT47B1P0C2W7 299 aaPredicted RBP21.79■■□□□ 1.08
GSE1-206ENST00000438180 KCNH5Q8NCM2 988 aa21.79■■□□□ 1.08
GSE1-206ENST00000438180 ORAI2Q96SN7 254 aa21.79■■□□□ 1.08
GSE1-206ENST00000438180 MSH6P52701 1360 aa21.79■■□□□ 1.08
GSE1-206ENST00000438180 MST1RQ04912 1400 aa21.78■■□□□ 1.08
GSE1-206ENST00000438180 HSP90AB2PQ58FF8 381 aa21.78■■□□□ 1.08
GSE1-206ENST00000438180 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.07
GSE1-206ENST00000438180 NUTM2GQ5VZR2 741 aa21.76■■□□□ 1.07
GSE1-206ENST00000438180 FOXO3O43524 673 aa21.75■■□□□ 1.07
GSE1-206ENST00000438180 SULT6B1Q6IMI4 303 aa21.75■■□□□ 1.07
GSE1-206ENST00000438180 LTN1O94822 1766 aa21.75■■□□□ 1.07
GSE1-206ENST00000438180 NFAT5O94916 1531 aa21.75■■□□□ 1.07
GSE1-206ENST00000438180 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
GSE1-206ENST00000438180 PHRF1Q9P1Y6 1649 aaKnown RBP21.74■■□□□ 1.07
GSE1-206ENST00000438180 CCDC136Q96JN2 1154 aa21.74■■□□□ 1.07
GSE1-206ENST00000438180 HOXC9P31274 260 aa21.73■■□□□ 1.07
GSE1-206ENST00000438180 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
GSE1-206ENST00000438180 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
GSE1-206ENST00000438180 SLIT3O75094 1523 aa21.73■■□□□ 1.07
GSE1-206ENST00000438180 DLG5Q8TDM6 1919 aa21.73■■□□□ 1.07
GSE1-206ENST00000438180 PLIN1O60240 522 aa21.72■■□□□ 1.07
GSE1-206ENST00000438180 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
GSE1-206ENST00000438180 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
GSE1-206ENST00000438180 KDRP35968 1356 aa21.71■■□□□ 1.07
GSE1-206ENST00000438180 EXOC6Q8TAG9 804 aa21.71■■□□□ 1.07
GSE1-206ENST00000438180 IGSF1Q8N6C5 1336 aa21.71■■□□□ 1.07
GSE1-206ENST00000438180 NPHP3Q7Z494 1330 aa21.69■■□□□ 1.06
GSE1-206ENST00000438180 AEBP1Q8IUX7 1158 aa21.69■■□□□ 1.06
GSE1-206ENST00000438180 USP19O94966 1318 aa21.69■■□□□ 1.06
GSE1-206ENST00000438180 ALS2Q96Q42 1657 aa21.68■■□□□ 1.06
GSE1-206ENST00000438180 RARSP54136 660 aaKnown RBP21.68■■□□□ 1.06
GSE1-206ENST00000438180 GNAI1P63096 354 aa21.68■■□□□ 1.06
GSE1-206ENST00000438180 IP6K1Q92551 441 aa21.68■■□□□ 1.06
GSE1-206ENST00000438180 IFT57Q9NWB7 429 aa21.67■■□□□ 1.06
GSE1-206ENST00000438180 BCAR3O75815 825 aa21.66■■□□□ 1.06
GSE1-206ENST00000438180 CANXP27824 592 aaKnown RBP21.66■■□□□ 1.06
GSE1-206ENST00000438180 XPCQ01831 940 aaPredicted RBP21.66■■□□□ 1.06
GSE1-206ENST00000438180 PDE3AQ14432 1141 aa21.66■■□□□ 1.06
GSE1-206ENST00000438180 TSR2Q969E8 191 aaKnown RBP21.66■■□□□ 1.06
GSE1-206ENST00000438180 CRBNQ96SW2 442 aa21.66■■□□□ 1.06
GSE1-206ENST00000438180 EYA1Q99502 592 aa21.66■■□□□ 1.06
GSE1-206ENST00000438180 GCP02774 474 aa21.65■■□□□ 1.06
GSE1-206ENST00000438180 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
GSE1-206ENST00000438180 ZNF428Q96B54 188 aa21.65■■□□□ 1.06
GSE1-206ENST00000438180 EXOSC9Q06265 439 aaKnown RBP21.63■■□□□ 1.05
GSE1-206ENST00000438180 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
GSE1-206ENST00000438180 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
GSE1-206ENST00000438180 C20orf194Q5TEA3 1177 aa21.61■■□□□ 1.05
GSE1-206ENST00000438180 CFAP44Q96MT7 982 aa21.61■■□□□ 1.05
GSE1-206ENST00000438180 TNS3Q68CZ2 1445 aa21.61■■□□□ 1.05
GSE1-206ENST00000438180 MS4A1P11836 297 aa21.6■■□□□ 1.05
GSE1-206ENST00000438180 ARHGEF25Q86VW2 580 aa21.6■■□□□ 1.05
GSE1-206ENST00000438180 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
GSE1-206ENST00000438180 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
GSE1-206ENST00000438180 PXDNQ92626 1479 aa21.59■■□□□ 1.05
GSE1-206ENST00000438180 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
GSE1-206ENST00000438180 ALDH1L2Q3SY69 923 aa21.58■■□□□ 1.05
GSE1-206ENST00000438180 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
GSE1-206ENST00000438180 AAMPQ13685 434 aa21.58■■□□□ 1.04
GSE1-206ENST00000438180 FRAT1Q92837 279 aaPredicted RBP21.58■■□□□ 1.04
GSE1-206ENST00000438180 LTV1Q96GA3 475 aaPredicted RBP21.58■■□□□ 1.04
GSE1-206ENST00000438180 THUMPD2Q9BTF0 503 aaKnown RBP21.57■■□□□ 1.04
GSE1-206ENST00000438180 SMC4Q9NTJ3 1288 aa21.57■■□□□ 1.04
GSE1-206ENST00000438180 ZBTB7CA1YPR0 619 aa21.56■■□□□ 1.04
GSE1-206ENST00000438180 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
GSE1-206ENST00000438180 KIF16BQ96L93 1317 aa21.56■■□□□ 1.04
GSE1-206ENST00000438180 ABCC6O95255 1503 aa21.55■■□□□ 1.04
GSE1-206ENST00000438180 MTHFSDQ2M296 383 aaKnown RBP21.55■■□□□ 1.04
GSE1-206ENST00000438180 MED1Q15648 1581 aaPredicted RBP21.55■■□□□ 1.04
GSE1-206ENST00000438180 FAM83GA6ND36 823 aa21.55■■□□□ 1.04
GSE1-206ENST00000438180 BRINP3Q76B58 766 aa21.55■■□□□ 1.04
GSE1-206ENST00000438180 MBIPQ9NS73 344 aa21.55■■□□□ 1.04
GSE1-206ENST00000438180 SLAIN2Q9P270 581 aa21.55■■□□□ 1.04
GSE1-206ENST00000438180 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
GSE1-206ENST00000438180 SPATA31A3Q5VYP0 1347 aa21.54■■□□□ 1.04
GSE1-206ENST00000438180 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
GSE1-206ENST00000438180 IPO8O15397 1037 aaKnown RBP21.52■■□□□ 1.04
GSE1-206ENST00000438180 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.03
GSE1-206ENST00000438180 DCTN1Q14203 1278 aa21.52■■□□□ 1.03
GSE1-206ENST00000438180 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.03
GSE1-206ENST00000438180 CAMTA1Q9Y6Y1 1673 aa21.51■■□□□ 1.03
GSE1-206ENST00000438180 NCAPD2Q15021 1401 aa21.51■■□□□ 1.03
GSE1-206ENST00000438180 GNAT3A8MTJ3 354 aa21.51■■□□□ 1.03
GSE1-206ENST00000438180 CHL1O00533 1208 aa21.5■■□□□ 1.03
GSE1-206ENST00000438180 MCM10Q7L590 875 aa21.5■■□□□ 1.03
GSE1-206ENST00000438180 MAP3K5Q99683 1374 aa21.5■■□□□ 1.03
GSE1-206ENST00000438180 LRRC37A3O60309 1634 aa21.5■■□□□ 1.03
GSE1-206ENST00000438180 CRYBG1Q9Y4K1 1723 aa21.5■■□□□ 1.03
GSE1-206ENST00000438180 NBPF6Q5VWK0 638 aa21.49■■□□□ 1.03
GSE1-206ENST00000438180 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms