RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 A0A1B0GUL7 405 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 TRAK2O60296 914 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 PEX19P40855 299 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 SKOR2Q2VWA4 1001 aaPredicted RBP7.85□□□□□ -1.15
MCF2-205ENST00000437564 WDR78Q5VTH9 848 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 GET4Q7L5D6 327 aaPredicted RBP7.85□□□□□ -1.15
MCF2-205ENST00000437564 ABCF2Q9UG63 623 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 ZKSCAN5Q9Y2L8 839 aa7.85□□□□□ -1.15
MCF2-205ENST00000437564 PPFIA2O75334 1257 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 ZMYND10O75800 440 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 SLC4A3P48751 1232 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 TRAF1Q13077 416 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 PPP2R5AQ15172 486 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 CACTIN-AS1Q8N1I8 211 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 ACRBPQ8NEB7 543 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 ANKRD7Q92527 254 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 CEP89Q96ST8 783 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 HIRIP3Q9BW71 556 aaPredicted RBP7.84□□□□□ -1.15
MCF2-205ENST00000437564 MFRPQ9BY79 579 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 MAF1Q9H063 256 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 TMX4Q9H1E5 349 aaPredicted RBP7.84□□□□□ -1.15
MCF2-205ENST00000437564 C1orf115Q9H7X2 142 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 CHCHD3Q9NX63 227 aaKnown RBP7.84□□□□□ -1.15
MCF2-205ENST00000437564 MORC2Q9Y6X9 1032 aaPredicted RBP7.84□□□□□ -1.15
MCF2-205ENST00000437564 KANK1Q14678 1352 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 IL16Q14005 1332 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 MAP2K2P36507 400 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 E2F4Q16254 413 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 ZKSCAN2Q63HK3 967 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 LSM14AQ8ND56 463 aaKnown RBP7.84□□□□□ -1.15
MCF2-205ENST00000437564 ETAA1Q9NY74 926 aa7.84□□□□□ -1.15
MCF2-205ENST00000437564 RABEP1Q15276 862 aa7.83□□□□□ -1.16
MCF2-205ENST00000437564 HSP90AB2PQ58FF8 381 aa7.83□□□□□ -1.16
MCF2-205ENST00000437564 ANKRD20A12PQ8NF67 263 aa7.83□□□□□ -1.16
MCF2-205ENST00000437564 CWC25Q9NXE8 425 aaPredicted RBP7.83□□□□□ -1.16
MCF2-205ENST00000437564 DHX57Q6P158 1386 aaKnown RBP7.83□□□□□ -1.16
MCF2-205ENST00000437564 TNNT1P13805 278 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 NAP1L1P55209 391 aaKnown RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 FOXD4Q12950 439 aaPredicted RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 AMOTQ4VCS5 1084 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 DZIP3Q86Y13 1208 aaKnown RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 SUN2Q9UH99 717 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 PES1O00541 588 aaKnown RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 EPB41L2O43491 1005 aaKnown RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 RBM5P52756 815 aaKnown RBP eCLIP7.82□□□□□ -1.16
MCF2-205ENST00000437564 RHBDL3P58872 404 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 ADCY2Q08462 1091 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 NEXNQ0ZGT2 675 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 PUS10Q3MIT2 529 aaKnown RBP7.82□□□□□ -1.16
MCF2-205ENST00000437564 LONRF3Q496Y0 759 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 UBA5Q9GZZ9 404 aa7.82□□□□□ -1.16
MCF2-205ENST00000437564 POTEB2H3BUK9 544 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 EXOC5O00471 708 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 CYP2C19P33261 490 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 NASPP49321 788 aaPredicted RBP7.81□□□□□ -1.16
MCF2-205ENST00000437564 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 MORC1Q86VD1 984 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 NLRP13Q86W25 1043 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 ANKRD13AQ8IZ07 590 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 KRT222Q8N1A0 295 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 ANTXR1Q9H6X2 564 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 CCDC39Q9UFE4 941 aa7.81□□□□□ -1.16
MCF2-205ENST00000437564 DDX41Q9UJV9 622 aaKnown RBP7.81□□□□□ -1.16
MCF2-205ENST00000437564 PPP1R37O75864 691 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 HNRNPH2P55795 449 aaKnown RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 XPCQ01831 940 aaPredicted RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 AP1ARQ63HQ0 302 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 MCTP2Q6DN12 878 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 ZNF467Q7Z7K2 595 aaPredicted RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 TATDN2Q93075 761 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 SMAPO00193 183 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 KINO60870 393 aaKnown RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 PSMC1P62191 440 aaKnown RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 KIAA2012Q0VF49 1180 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 PDAP1Q13442 181 aaKnown RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 NOLC1Q14978 699 aaKnown RBP eCLIP7.8□□□□□ -1.16
MCF2-205ENST00000437564 PDCD2Q16342 344 aaPredicted RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 DRC1Q96MC2 740 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 ZNF396Q96N95 335 aaPredicted RBP7.8□□□□□ -1.16
MCF2-205ENST00000437564 ARPC5LQ9BPX5 153 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 VEZTQ9HBM0 779 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 TBC1D2BQ9UPU7 963 aa7.8□□□□□ -1.16
MCF2-205ENST00000437564 CAND2O75155 1236 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 FAM200BP0CF97 657 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 SKILP12757 684 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 TTC31Q49AM3 519 aaPredicted RBP7.79□□□□□ -1.16
MCF2-205ENST00000437564 TMCO4Q5TGY1 634 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 FMNL3Q8IVF7 1028 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 TXLNBQ8N3L3 684 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 OGFOD1Q8N543 542 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 PDLIM2Q96JY6 352 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 PANK3Q9H999 370 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 DIAPH3Q9NSV4 1193 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 IRAK4Q9NWZ3 460 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 RPGRIP1LQ68CZ1 1315 aa7.79□□□□□ -1.16
MCF2-205ENST00000437564 PAX3P23760 479 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms