RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TERF2IPQ9NYB0 399 aa9.62□□□□□ -0.87
LSM3P3-201ENST00000436601 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
LSM3P3-201ENST00000436601 A0A1W2PP64 1363 aa9.62□□□□□ -0.87
LSM3P3-201ENST00000436601 KNSTRNQ9Y448 316 aa9.61□□□□□ -0.87
LSM3P3-201ENST00000436601 CPSF1Q10570 1443 aaKnown RBP9.61□□□□□ -0.87
LSM3P3-201ENST00000436601 CDC42BPGQ6DT37 1551 aa9.61□□□□□ -0.87
LSM3P3-201ENST00000436601 NALCNQ8IZF0 1738 aa9.6□□□□□ -0.87
LSM3P3-201ENST00000436601 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
LSM3P3-201ENST00000436601 PRKRIP1Q9H875 184 aaPredicted RBP9.6□□□□□ -0.87
LSM3P3-201ENST00000436601 USP32Q8NFA0 1604 aa9.6□□□□□ -0.87
LSM3P3-201ENST00000436601 ACEP12821 1306 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 DCCP43146 1447 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 NSD3Q9BZ95 1437 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 ATF3P18847 181 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 CNGB1Q14028 1251 aaPredicted RBP9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 PMFBP1Q8TBY8 1022 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 ORAI2Q96SN7 254 aa9.59□□□□□ -0.87
LSM3P3-201ENST00000436601 MST1RQ04912 1400 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 LTBP4Q8N2S1 1624 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 TIE1P35590 1138 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 ESCO1Q5FWF5 840 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 ILDR1Q86SU0 546 aaPredicted RBP9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 POLR3AO14802 1390 aaPredicted RBP9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 MSH6P52701 1360 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 KTN1Q86UP2 1357 aaKnown RBP9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 NPC1L1Q9UHC9 1359 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 C1orf167Q5SNV9 1468 aa9.58□□□□□ -0.88
LSM3P3-201ENST00000436601 FMN2Q9NZ56 1722 aa9.57□□□□□ -0.88
LSM3P3-201ENST00000436601 FYB1O15117 783 aa9.57□□□□□ -0.88
LSM3P3-201ENST00000436601 MS4A3Q96HJ5 214 aa9.57□□□□□ -0.88
LSM3P3-201ENST00000436601 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
LSM3P3-201ENST00000436601 PARD3Q8TEW0 1356 aa9.57□□□□□ -0.88
LSM3P3-201ENST00000436601 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 RALBP1Q15311 655 aa9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 PPP1R15BQ5SWA1 713 aa9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 DAXXQ9UER7 740 aaPredicted RBP9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 EDC4Q6P2E9 1401 aaKnown RBP9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 SSH2Q76I76 1423 aa9.56□□□□□ -0.88
LSM3P3-201ENST00000436601 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 CCER2I3L3R5 266 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 CCDC184Q52MB2 194 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 ARXQ96QS3 562 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 GGNBP2Q9H3C7 697 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 SLAIN2Q9P270 581 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 USP6P35125 1406 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 TTC21BQ7Z4L5 1316 aa9.55□□□□□ -0.88
LSM3P3-201ENST00000436601 FOXO3O43524 673 aa9.54□□□□□ -0.88
LSM3P3-201ENST00000436601 NME9Q86XW9 330 aa9.54□□□□□ -0.88
LSM3P3-201ENST00000436601 TRPC6Q9Y210 931 aa9.54□□□□□ -0.88
LSM3P3-201ENST00000436601 NSD2O96028 1365 aa9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 BRINP3Q76B58 766 aa9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 MYBBP1AQ9BQG0 1328 aaKnown RBP9.53□□□□□ -0.88
LSM3P3-201ENST00000436601 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
LSM3P3-201ENST00000436601 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
LSM3P3-201ENST00000436601 PSME1Q06323 249 aa9.52□□□□□ -0.89
LSM3P3-201ENST00000436601 AK7Q96M32 723 aa9.52□□□□□ -0.89
LSM3P3-201ENST00000436601 TTC21AQ8NDW8 1320 aa9.52□□□□□ -0.89
LSM3P3-201ENST00000436601 C19orf67A6NJJ6 358 aa9.51□□□□□ -0.89
LSM3P3-201ENST00000436601 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
LSM3P3-201ENST00000436601 XPCQ01831 940 aaPredicted RBP9.51□□□□□ -0.89
LSM3P3-201ENST00000436601 KRT28Q7Z3Y7 464 aa9.51□□□□□ -0.89
LSM3P3-201ENST00000436601 DDX17Q92841 729 aaKnown RBP9.51□□□□□ -0.89
LSM3P3-201ENST00000436601 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
LSM3P3-201ENST00000436601 TNNT2P45379 298 aaPredicted RBP9.5□□□□□ -0.89
LSM3P3-201ENST00000436601 NLRP13Q86W25 1043 aa9.5□□□□□ -0.89
LSM3P3-201ENST00000436601 USP31Q70CQ4 1352 aa9.5□□□□□ -0.89
LSM3P3-201ENST00000436601 MLLT3P42568 568 aaPredicted RBP9.49□□□□□ -0.89
LSM3P3-201ENST00000436601 PDIA6Q15084 440 aa9.49□□□□□ -0.89
LSM3P3-201ENST00000436601 COG3Q96JB2 828 aa9.49□□□□□ -0.89
LSM3P3-201ENST00000436601 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
LSM3P3-201ENST00000436601 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
LSM3P3-201ENST00000436601 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 MON2Q7Z3U7 1717 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 RGPD8O14715 1765 aaPredicted RBP9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 AKAP12Q02952 1782 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 FBLN1P23142 703 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 NPHP3Q7Z494 1330 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 OVOS2A0A0J9YW53 1432 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 OVOS2Q6IE36 1432 aa9.48□□□□□ -0.89
LSM3P3-201ENST00000436601 MTHFSP49914 203 aa9.47□□□□□ -0.89
LSM3P3-201ENST00000436601 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
LSM3P3-201ENST00000436601 SOS2Q07890 1332 aaPredicted RBP9.47□□□□□ -0.89
LSM3P3-201ENST00000436601 SBNO1A3KN83 1393 aa9.47□□□□□ -0.89
LSM3P3-201ENST00000436601 PXDNQ92626 1479 aa9.47□□□□□ -0.89
LSM3P3-201ENST00000436601 KIF1AQ12756 1690 aa9.46□□□□□ -0.89
LSM3P3-201ENST00000436601 DPYSL4O14531 572 aa9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 TOM1O60784 492 aa9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 KRI1Q8N9T8 703 aaKnown RBP9.46□□□□□ -0.9
LSM3P3-201ENST00000436601 PNISRQ8TF01 805 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms