RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 C3P01024 1663 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 ATP10DQ9P241 1426 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 KDM2AQ9Y2K7 1162 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 FER1L4A9Z1Z3 1794 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 BMP2KLQ5H9B9 411 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 NRKQ7Z2Y5 1582 aa4.64□□□□□ -1.67
SHPRH-205ENST00000433355 LETM1O95202 739 aaPredicted RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 CWC22Q9HCG8 908 aaKnown RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 PNPLA6Q8IY17 1366 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 TAOK2Q9UL54 1235 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 RFX7Q2KHR2 1363 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 TULP1O00294 542 aaPredicted RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 DDX58O95786 925 aaKnown RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 RNF20Q5VTR2 975 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 PODXL2Q9NZ53 605 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 PER1O15534 1290 aaPredicted RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 TEX2Q8IWB9 1127 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 TRIM44Q96DX7 344 aaPredicted RBP4.63□□□□□ -1.67
SHPRH-205ENST00000433355 SMC4Q9NTJ3 1288 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 MAP7D2Q96T17 732 aa4.63□□□□□ -1.67
SHPRH-205ENST00000433355 CERS3Q8IU89 383 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 CHAF1AQ13111 956 aaPredicted RBP4.62□□□□□ -1.67
SHPRH-205ENST00000433355 RAD50Q92878 1312 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 NEXNQ0ZGT2 675 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 RBM19Q9Y4C8 960 aaKnown RBP4.62□□□□□ -1.67
SHPRH-205ENST00000433355 USP31Q70CQ4 1352 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 KIAA1211Q6ZU35 1233 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 FAM177A1Q8N128 213 aaPredicted RBP4.62□□□□□ -1.67
SHPRH-205ENST00000433355 N4BP2Q86UW6 1770 aaPredicted RBP4.62□□□□□ -1.67
SHPRH-205ENST00000433355 DISP3Q9P2K9 1392 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 TBX22Q9Y458 520 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 ZNF521Q96K83 1311 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 NALCNQ8IZF0 1738 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 TSPOAP1O95153 1857 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 AKAP12Q02952 1782 aa4.62□□□□□ -1.67
SHPRH-205ENST00000433355 PHF23Q9BUL5 403 aaPredicted RBP4.62□□□□□ -1.67
SHPRH-205ENST00000433355 AFAP1Q8N556 730 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 ARID3CA6NKF2 412 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 ZRSR1Q15695 479 aaKnown RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 NBPF8Q3BBV2 869 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 CDC45O75419 566 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 RGL3Q3MIN7 710 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 RSPH6AQ9H0K4 717 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 MAP2P11137 1827 aaKnown RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 ANKRD1Q15327 319 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 ATF7IPQ6VMQ6 1270 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.61□□□□□ -1.673e-7■■■□□ 18.4
SHPRH-205ENST00000433355 OVOS2A0A0J9YW53 1432 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 OVOS2Q6IE36 1432 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 SLFN5Q08AF3 891 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 FBXO3Q9UK99 471 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 AK9Q5TCS8 1911 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 RGL2O15211 777 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 HMGN5P82970 282 aaKnown RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 MVPQ14764 893 aaKnown RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 INTS3Q68E01 1043 aaKnown RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 KIF2AO00139 706 aaPredicted RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 ZKSCAN1P17029 563 aaPredicted RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 IQSEC3Q9UPP2 1182 aaPredicted RBP4.61□□□□□ -1.67
SHPRH-205ENST00000433355 MYO1BO43795 1136 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 TUBB4BP68371 445 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 DMRT2Q9Y5R5 561 aa4.61□□□□□ -1.67
SHPRH-205ENST00000433355 DHX16O60231 1041 aaKnown RBP4.6□□□□□ -1.67
SHPRH-205ENST00000433355 KRT32Q14532 448 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 GTF2E1P29083 439 aaPredicted RBP4.6□□□□□ -1.67
SHPRH-205ENST00000433355 PSME1Q06323 249 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 FMN2Q9NZ56 1722 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 CCP110O43303 1012 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 RAB11FIP3O75154 756 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 ALKQ9UM73 1620 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 TOPAZ1Q8N9V7 1692 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 PIP4K2AP48426 406 aaPredicted RBP4.6□□□□□ -1.67
SHPRH-205ENST00000433355 ARHGAP23Q9P227 1491 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 ATL3Q6DD88 541 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 BACH2Q9BYV9 841 aa4.6□□□□□ -1.67
SHPRH-205ENST00000433355 CHGAP10645 457 aaKnown RBP4.6□□□□□ -1.67
SHPRH-205ENST00000433355 ABCC12Q96J65 1359 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 NFE2L2Q16236 605 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 KDRP35968 1356 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 GGT6Q6P531 493 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 PHRF1Q9P1Y6 1649 aaKnown RBP4.59□□□□□ -1.67
SHPRH-205ENST00000433355 PSMA5P28066 241 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 PPP4R3BQ5MIZ7 849 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 TCP11L2Q8N4U5 519 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 FAM13BQ9NYF5 915 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 PTPRMP28827 1452 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 IQSEC2Q5JU85 1478 aa4.59□□□□□ -1.67
SHPRH-205ENST00000433355 WASLO00401 505 aaPredicted RBP4.59□□□□□ -1.68
SHPRH-205ENST00000433355 TXLNBQ8N3L3 684 aa4.59□□□□□ -1.68
SHPRH-205ENST00000433355 SH2B1Q9NRF2 756 aaPredicted RBP4.59□□□□□ -1.68
SHPRH-205ENST00000433355 TTC41PQ6P2S7 1318 aa4.59□□□□□ -1.68
SHPRH-205ENST00000433355 PLEKHG3A1L390 1219 aa4.59□□□□□ -1.68
SHPRH-205ENST00000433355 PDE4AP27815 886 aa4.59□□□□□ -1.68
SHPRH-205ENST00000433355 CCDC30Q5VVM6 783 aa4.59□□□□□ -1.68
SHPRH-205ENST00000433355 CDCA7Q9BWT1 371 aaPredicted RBP4.59□□□□□ -1.68
SHPRH-205ENST00000433355 TEX13AQ9BXU3 409 aaPredicted RBP4.59□□□□□ -1.68
SHPRH-205ENST00000433355 CHMP5Q9NZZ3 219 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 HMG20BQ9P0W2 317 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 CNPY4Q8N129 248 aa4.58□□□□□ -1.68
SHPRH-205ENST00000433355 MAP3K5Q99683 1374 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms