RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 TULP1O00294 542 aaPredicted RBP15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 ADAMTS2O95450 1211 aa15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 IGHDP01880 384 aa15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 G3BP1Q13283 466 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 TOMM22Q9NS69 142 aa15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 MBIPQ9NS73 344 aa15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
LRRTM1-206ENST00000433224 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 CABP4P57796 275 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 HSP90AA2PQ14568 343 aaPredicted RBP15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 DDX17Q92841 729 aaKnown RBP15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 HDAC5Q9UQL6 1122 aa15.32■□□□□ 0.04
LRRTM1-206ENST00000433224 GOLGA6L4A6NEF3 574 aa15.31■□□□□ 0.04
LRRTM1-206ENST00000433224 YTHDC2Q9H6S0 1430 aaKnown RBP15.31■□□□□ 0.04
LRRTM1-206ENST00000433224 ASXL1Q8IXJ9 1541 aa15.31■□□□□ 0.04
LRRTM1-206ENST00000433224 PLA2R1Q13018 1463 aa15.31■□□□□ 0.04
LRRTM1-206ENST00000433224 RLBP1P12271 317 aa15.31■□□□□ 0.04
LRRTM1-206ENST00000433224 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
LRRTM1-206ENST00000433224 HSP90B1P14625 803 aaKnown RBP15.3■□□□□ 0.04
LRRTM1-206ENST00000433224 DDX11L8A8MPP1 907 aa15.3■□□□□ 0.04
LRRTM1-206ENST00000433224 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
LRRTM1-206ENST00000433224 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 NKTRP30414 1462 aaKnown RBP15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 PIP4K2AP48426 406 aaPredicted RBP15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 MAST1Q9Y2H9 1570 aa15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 GNAI2P04899 355 aa15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 PCDHB15Q9Y5E8 787 aa15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 ATP10AO60312 1499 aa15.29■□□□□ 0.04
LRRTM1-206ENST00000433224 GNAI3P08754 354 aa15.28■□□□□ 0.04
LRRTM1-206ENST00000433224 AEBP2Q6ZN18 517 aaPredicted RBP15.28■□□□□ 0.04
LRRTM1-206ENST00000433224 MEX3CQ5U5Q3 659 aaKnown RBP15.28■□□□□ 0.04
LRRTM1-206ENST00000433224 SRCIN1Q9C0H9 1055 aa15.28■□□□□ 0.04
LRRTM1-206ENST00000433224 ST18O60284 1047 aa15.27■□□□□ 0.04
LRRTM1-206ENST00000433224 SRGAP3O43295 1099 aa15.27■□□□□ 0.04
LRRTM1-206ENST00000433224 KCNH5Q8NCM2 988 aa15.27■□□□□ 0.03
LRRTM1-206ENST00000433224 TRAK2O60296 914 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 ZRSR1Q15695 479 aaKnown RBP15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 CHD1LQ86WJ1 897 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 GCC2Q8IWJ2 1684 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
LRRTM1-206ENST00000433224 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
LRRTM1-206ENST00000433224 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
LRRTM1-206ENST00000433224 MAP3K19Q56UN5 1328 aa15.25■□□□□ 0.03
LRRTM1-206ENST00000433224 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 CLASRPQ8N2M8 674 aaKnown RBP15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 ANKRD24Q8TF21 1146 aa15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 MTHFSDQ2M296 383 aaKnown RBP15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 REC8O95072 547 aa15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 MYO5CQ9NQX4 1742 aa15.24■□□□□ 0.03
LRRTM1-206ENST00000433224 FOSBP53539 338 aa15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 NUTM1Q86Y26 1132 aa15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 EYA1Q99502 592 aa15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 TSPOAP1O95153 1857 aa15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 ZCCHC11Q5TAX3 1644 aaKnown RBP15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
LRRTM1-206ENST00000433224 APPP05067 770 aa15.22■□□□□ 0.03
LRRTM1-206ENST00000433224 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
LRRTM1-206ENST00000433224 INTS3Q68E01 1043 aaKnown RBP15.22■□□□□ 0.03
LRRTM1-206ENST00000433224 CDC45O75419 566 aa15.22■□□□□ 0.03
LRRTM1-206ENST00000433224 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
LRRTM1-206ENST00000433224 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.03
LRRTM1-206ENST00000433224 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.03
LRRTM1-206ENST00000433224 MAGI2Q86UL8 1455 aa15.21■□□□□ 0.03
LRRTM1-206ENST00000433224 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
LRRTM1-206ENST00000433224 METP08581 1390 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 KDM4AO75164 1064 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 POLR3AO14802 1390 aaPredicted RBP15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 NSD2O96028 1365 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 PTPRTO14522 1441 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 ABCC1P33527 1531 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 FLIIQ13045 1269 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 MEIS3Q99687 375 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
LRRTM1-206ENST00000433224 TBX22Q9Y458 520 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 NEK4P51957 841 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
LRRTM1-206ENST00000433224 GCP02774 474 aa15.18■□□□□ 0.02
LRRTM1-206ENST00000433224 CDC42BPAQ5VT25 1732 aa15.18■□□□□ 0.02
LRRTM1-206ENST00000433224 PTMSP20962 102 aa15.18■□□□□ 0.02
LRRTM1-206ENST00000433224 MCM4P33991 863 aa15.17■□□□□ 0.02
LRRTM1-206ENST00000433224 MRE11P49959 708 aa15.17■□□□□ 0.02
LRRTM1-206ENST00000433224 AAMPQ13685 434 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms