RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 ATP7BP35670 1465 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
SMPD4-206ENST00000433118 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
SMPD4-206ENST00000433118 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SMPD4-206ENST00000433118 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-206ENST00000433118 MFAP1P55081 439 aaKnown RBP13.31□□□□□ -0.28
SMPD4-206ENST00000433118 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
SMPD4-206ENST00000433118 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
SMPD4-206ENST00000433118 RIMS1Q86UR5 1692 aaKnown RBP13.31□□□□□ -0.28
SMPD4-206ENST00000433118 ATF7IPQ6VMQ6 1270 aa13.31□□□□□ -0.28
SMPD4-206ENST00000433118 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
SMPD4-206ENST00000433118 ANTXR1Q9H6X2 564 aa13.3□□□□□ -0.28
SMPD4-206ENST00000433118 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
SMPD4-206ENST00000433118 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
SMPD4-206ENST00000433118 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
SMPD4-206ENST00000433118 HDAC1Q13547 482 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-206ENST00000433118 AEBP1Q8IUX7 1158 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 MED14O60244 1454 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 RSPH6AQ9H0K4 717 aa13.28□□□□□ -0.28
SMPD4-206ENST00000433118 SLIT1O75093 1534 aa13.27□□□□□ -0.28
SMPD4-206ENST00000433118 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
SMPD4-206ENST00000433118 IL13P35225 146 aa13.27□□□□□ -0.28
SMPD4-206ENST00000433118 ELL2O00472 640 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-206ENST00000433118 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
SMPD4-206ENST00000433118 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
SMPD4-206ENST00000433118 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.29
SMPD4-206ENST00000433118 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.29
SMPD4-206ENST00000433118 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 IL16Q14005 1332 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 KIF16BQ96L93 1317 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
SMPD4-206ENST00000433118 FCHSD2O94868 740 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 CDC42BPGQ6DT37 1551 aa13.26□□□□□ -0.29
SMPD4-206ENST00000433118 PNNQ9H307 717 aaKnown RBP13.26□□□□□ -0.29
SMPD4-206ENST00000433118 NLRP6P59044 892 aa13.25□□□□□ -0.29
SMPD4-206ENST00000433118 XPCQ01831 940 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-206ENST00000433118 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
SMPD4-206ENST00000433118 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-206ENST00000433118 ARXQ96QS3 562 aa13.25□□□□□ -0.29
SMPD4-206ENST00000433118 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
SMPD4-206ENST00000433118 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
SMPD4-206ENST00000433118 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
SMPD4-206ENST00000433118 LTV1Q96GA3 475 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-206ENST00000433118 ZBTB40Q9NUA8 1239 aa13.24□□□□□ -0.29
SMPD4-206ENST00000433118 USP6P35125 1406 aa13.24□□□□□ -0.29
SMPD4-206ENST00000433118 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
SMPD4-206ENST00000433118 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
SMPD4-206ENST00000433118 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
SMPD4-206ENST00000433118 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
SMPD4-206ENST00000433118 HSCBQ8IWL3 235 aa13.23□□□□□ -0.29
SMPD4-206ENST00000433118 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
SMPD4-206ENST00000433118 LNPKQ9C0E8 428 aa13.23□□□□□ -0.29
SMPD4-206ENST00000433118 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
SMPD4-206ENST00000433118 AMPHP49418 695 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 CHMP5Q9NZZ3 219 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 RGPD8O14715 1765 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-206ENST00000433118 MCM4P33991 863 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.29
SMPD4-206ENST00000433118 MAP3K19Q56UN5 1328 aa13.21□□□□□ -0.29
SMPD4-206ENST00000433118 FAM43AQ8N2R8 423 aa13.2□□□□□ -0.3
SMPD4-206ENST00000433118 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
SMPD4-206ENST00000433118 NUCB1Q02818 461 aa13.2□□□□□ -0.3
SMPD4-206ENST00000433118 ITSN1Q15811 1721 aa13.2□□□□□ -0.3
SMPD4-206ENST00000433118 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
SMPD4-206ENST00000433118 HSPA2P54652 639 aa13.19□□□□□ -0.3
SMPD4-206ENST00000433118 AATKQ6ZMQ8 1374 aa13.19□□□□□ -0.3
SMPD4-206ENST00000433118 CHD1LQ86WJ1 897 aa13.19□□□□□ -0.3
SMPD4-206ENST00000433118 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
SMPD4-206ENST00000433118 FOXO3O43524 673 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 MCM10Q7L590 875 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 PSME1Q06323 249 aa13.18□□□□□ -0.3
SMPD4-206ENST00000433118 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
SMPD4-206ENST00000433118 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
SMPD4-206ENST00000433118 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-206ENST00000433118 OVOS2A0A0J9YW53 1432 aa13.17□□□□□ -0.3
SMPD4-206ENST00000433118 OVOS2Q6IE36 1432 aa13.17□□□□□ -0.3
SMPD4-206ENST00000433118 PROSER2Q86WR7 435 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-206ENST00000433118 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 ZNF428Q96B54 188 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 TRAK2O60296 914 aa13.16□□□□□ -0.3
SMPD4-206ENST00000433118 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms