RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 RGPD8O14715 1765 aaPredicted RBP18.82■□□□□ 0.6
RFTN1-203ENST00000432519 TSPYL6Q8N831 410 aa18.82■□□□□ 0.6
RFTN1-203ENST00000432519 EIF4A2Q14240 407 aaKnown RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
RFTN1-203ENST00000432519 FTSJ3Q8IY81 847 aaKnown RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 ZBTB47Q9UFB7 747 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 OVOS2A0A0J9YW53 1432 aa18.81■□□□□ 0.6
RFTN1-203ENST00000432519 OVOS2Q6IE36 1432 aa18.81■□□□□ 0.6
RFTN1-203ENST00000432519 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 CT47B1P0C2W7 299 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-203ENST00000432519 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
RFTN1-203ENST00000432519 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
RFTN1-203ENST00000432519 KCNA6P17658 529 aa18.8■□□□□ 0.6
RFTN1-203ENST00000432519 ATF7IPQ6VMQ6 1270 aa18.79■□□□□ 0.6
RFTN1-203ENST00000432519 NEFMP07197 916 aa18.79■□□□□ 0.6
RFTN1-203ENST00000432519 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
RFTN1-203ENST00000432519 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
RFTN1-203ENST00000432519 PEAK1Q9H792 1746 aa18.78■□□□□ 0.6
RFTN1-203ENST00000432519 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
RFTN1-203ENST00000432519 TMEM57Q8N5G2 664 aa18.77■□□□□ 0.6
RFTN1-203ENST00000432519 MBIPQ9NS73 344 aa18.77■□□□□ 0.6
RFTN1-203ENST00000432519 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
RFTN1-203ENST00000432519 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
RFTN1-203ENST00000432519 PTCH1Q13635 1447 aa18.76■□□□□ 0.59
RFTN1-203ENST00000432519 VAMP4O75379 141 aa18.76■□□□□ 0.59
RFTN1-203ENST00000432519 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
RFTN1-203ENST00000432519 NBR1Q14596 966 aa18.75■□□□□ 0.59
RFTN1-203ENST00000432519 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
RFTN1-203ENST00000432519 SEC24BO95487 1268 aa18.74■□□□□ 0.59
RFTN1-203ENST00000432519 NGDNQ8NEJ9 315 aaKnown RBP18.74■□□□□ 0.59
RFTN1-203ENST00000432519 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
RFTN1-203ENST00000432519 MAP3K19Q56UN5 1328 aa18.74■□□□□ 0.59
RFTN1-203ENST00000432519 NUTM2GQ5VZR2 741 aa18.73■□□□□ 0.59
RFTN1-203ENST00000432519 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
RFTN1-203ENST00000432519 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
RFTN1-203ENST00000432519 IFT57Q9NWB7 429 aa18.72■□□□□ 0.59
RFTN1-203ENST00000432519 USP31Q70CQ4 1352 aa18.72■□□□□ 0.59
RFTN1-203ENST00000432519 XRN1Q8IZH2 1706 aaKnown RBP18.72■□□□□ 0.59
RFTN1-203ENST00000432519 KRT24Q2M2I5 525 aa18.72■□□□□ 0.59
RFTN1-203ENST00000432519 CEP170BQ9Y4F5 1589 aaPredicted RBP18.71■□□□□ 0.59
RFTN1-203ENST00000432519 GNAI1P63096 354 aa18.71■□□□□ 0.59
RFTN1-203ENST00000432519 MCM10Q7L590 875 aa18.71■□□□□ 0.59
RFTN1-203ENST00000432519 AAMPQ13685 434 aa18.7■□□□□ 0.58
RFTN1-203ENST00000432519 ALDH1L2Q3SY69 923 aa18.7■□□□□ 0.58
RFTN1-203ENST00000432519 CFAP44Q96MT7 982 aa18.7■□□□□ 0.58
RFTN1-203ENST00000432519 KIF16BQ96L93 1317 aa18.7■□□□□ 0.58
RFTN1-203ENST00000432519 MRPL50Q8N5N7 158 aaKnown RBP18.7■□□□□ 0.58
RFTN1-203ENST00000432519 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
RFTN1-203ENST00000432519 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
RFTN1-203ENST00000432519 ZBTB40Q9NUA8 1239 aa18.69■□□□□ 0.58
RFTN1-203ENST00000432519 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
RFTN1-203ENST00000432519 FOXO3O43524 673 aa18.69■□□□□ 0.58
RFTN1-203ENST00000432519 USP19O94966 1318 aa18.69■□□□□ 0.58
RFTN1-203ENST00000432519 TWISTNBQ3B726 338 aaPredicted RBP18.68■□□□□ 0.58
RFTN1-203ENST00000432519 PIK3C2AO00443 1686 aa18.68■□□□□ 0.58
RFTN1-203ENST00000432519 RGPD1P0DJD0 1748 aa18.67■□□□□ 0.58
RFTN1-203ENST00000432519 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
RFTN1-203ENST00000432519 IPO8O15397 1037 aaKnown RBP18.66■□□□□ 0.58
RFTN1-203ENST00000432519 NLRP6P59044 892 aa18.66■□□□□ 0.58
RFTN1-203ENST00000432519 CALD1Q05682 793 aaKnown RBP18.66■□□□□ 0.58
RFTN1-203ENST00000432519 C1orf115Q9H7X2 142 aa18.65■□□□□ 0.58
RFTN1-203ENST00000432519 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
RFTN1-203ENST00000432519 MIS18AQ9NYP9 233 aa18.65■□□□□ 0.58
RFTN1-203ENST00000432519 LMOD3Q0VAK6 560 aa18.64■□□□□ 0.57
RFTN1-203ENST00000432519 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
RFTN1-203ENST00000432519 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
RFTN1-203ENST00000432519 EYA1Q99502 592 aa18.63■□□□□ 0.57
RFTN1-203ENST00000432519 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
RFTN1-203ENST00000432519 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
RFTN1-203ENST00000432519 AMPHP49418 695 aa18.62■□□□□ 0.57
RFTN1-203ENST00000432519 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
RFTN1-203ENST00000432519 FLT4P35916 1363 aa18.62■□□□□ 0.57
RFTN1-203ENST00000432519 ANKLE2Q86XL3 938 aa18.61■□□□□ 0.57
RFTN1-203ENST00000432519 FMN2Q9NZ56 1722 aa18.61■□□□□ 0.57
RFTN1-203ENST00000432519 MARF1Q9Y4F3 1742 aaKnown RBP18.61■□□□□ 0.57
RFTN1-203ENST00000432519 SBNO1A3KN83 1393 aa18.61■□□□□ 0.57
RFTN1-203ENST00000432519 PIK3R4Q99570 1358 aa18.61■□□□□ 0.57
RFTN1-203ENST00000432519 CHL1O00533 1208 aa18.6■□□□□ 0.57
RFTN1-203ENST00000432519 ABTB2Q8N961 1025 aa18.6■□□□□ 0.57
RFTN1-203ENST00000432519 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
RFTN1-203ENST00000432519 ANKARQ7Z5J8 1434 aa18.59■□□□□ 0.57
RFTN1-203ENST00000432519 ABCC4O15439 1325 aa18.58■□□□□ 0.57
RFTN1-203ENST00000432519 CHD2O14647 1828 aaKnown RBP18.58■□□□□ 0.57
RFTN1-203ENST00000432519 C14orf37Q86TY3 774 aa18.58■□□□□ 0.57
RFTN1-203ENST00000432519 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.57
RFTN1-203ENST00000432519 CRB1P82279 1406 aa18.58■□□□□ 0.57
RFTN1-203ENST00000432519 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.56
RFTN1-203ENST00000432519 DDRGK1Q96HY6 314 aa18.58■□□□□ 0.56
RFTN1-203ENST00000432519 ARHGEF10O15013 1369 aa18.58■□□□□ 0.56
RFTN1-203ENST00000432519 SIRT2Q8IXJ6 389 aa18.57■□□□□ 0.56
RFTN1-203ENST00000432519 IGSF1Q8N6C5 1336 aa18.57■□□□□ 0.56
RFTN1-203ENST00000432519 HOXC9P31274 260 aa18.57■□□□□ 0.56
RFTN1-203ENST00000432519 KDRP35968 1356 aa18.57■□□□□ 0.56
RFTN1-203ENST00000432519 PHF8Q9UPP1 1060 aa18.56■□□□□ 0.56
RFTN1-203ENST00000432519 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
RFTN1-203ENST00000432519 USHBP1Q8N6Y0 703 aa18.55■□□□□ 0.56
RFTN1-203ENST00000432519 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
RFTN1-203ENST00000432519 ADAMTSL3P82987 1691 aa18.53■□□□□ 0.56
RFTN1-203ENST00000432519 RGS12O14924 1447 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms