RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TSPY10P0CW01 314 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 SDR16C5Q8N3Y7 309 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 ATRIPQ8WXE1 791 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 CCDC85AQ96PX6 553 aaPredicted RBP6.46□□□□□ -1.37
PTPN4-203ENST00000430976 KIF2CQ99661 725 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 ARHGEF10LQ9HCE6 1279 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 ITM2BQ9Y287 266 aa6.46□□□□□ -1.37
PTPN4-203ENST00000430976 PHC3Q8NDX5 983 aa6.46□□□□□ -1.38
PTPN4-203ENST00000430976 DUSP27Q5VZP5 1158 aa6.46□□□□□ -1.38
PTPN4-203ENST00000430976 TAF4BQ92750 862 aa6.46□□□□□ -1.38
PTPN4-203ENST00000430976 CALCOCO1Q9P1Z2 691 aa6.46□□□□□ -1.38
PTPN4-203ENST00000430976 SUFUQ9UMX1 484 aa6.46□□□□□ -1.38
PTPN4-203ENST00000430976 FKBP15Q5T1M5 1219 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 TCEAL9Q9UHQ7 104 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 PDZRN3Q9UPQ7 1066 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 FLT3P36888 993 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 ARMC3Q5W041 872 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 GPATCH3Q96I76 525 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 EFCC1Q9HA90 598 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 IP6K2Q9UHH9 426 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 PRR12Q9ULL5 1215 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 COMMD10Q9Y6G5 202 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 IGBP1P78318 339 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 AP1ARQ63HQ0 302 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 SPC24Q8NBT2 197 aa6.45□□□□□ -1.38
PTPN4-203ENST00000430976 CDCA7Q9BWT1 371 aaPredicted RBP6.45□□□□□ -1.38
PTPN4-203ENST00000430976 PPP4R4Q6NUP7 873 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 MPP4Q96JB8 637 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 PAGR1Q9BTK6 254 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 MKRN1Q9UHC7 482 aaKnown RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 UQCRHLA0A096LP55 91 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 ESPNB1AK53 854 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 HOXA2O43364 376 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 UQCRHP07919 91 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 ATICP31939 592 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 RSPH1Q8WYR4 309 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 SLC26A8Q96RN1 970 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 MAF1Q9H063 256 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 RSPH9Q9H1X1 276 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 DDX10Q13206 875 aaKnown RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 SAFB2Q14151 953 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 LCA5Q86VQ0 697 aa6.44□□□□□ -1.38
PTPN4-203ENST00000430976 SREK1Q8WXA9 508 aaKnown RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 ERCC4Q92889 916 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
PTPN4-203ENST00000430976 U2SURPO15042 1029 aaKnown RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 CTAGE5O15320 804 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 BTN2A1Q7KYR7 527 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 OGFOD1Q8N543 542 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 FAM184AQ8NB25 1140 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 RPS6KC1Q96S38 1066 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 PICK1Q9NRD5 415 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 DMRT2Q9Y5R5 561 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 SPDYE4A6NLX3 237 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 BDNFP23560 247 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 GRM1Q13255 1194 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 SWAP70Q9UH65 585 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 ZCCHC8Q6NZY4 707 aaKnown RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 ARMC9Q7Z3E5 817 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 AMOTL1Q8IY63 956 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 RPUSD2Q8IZ73 545 aaKnown RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 NAP1L4Q99733 375 aaKnown RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 BSDC1Q9NW68 430 aaPredicted RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 CWC15Q9P013 229 aaKnown RBP6.43□□□□□ -1.38
PTPN4-203ENST00000430976 PMFBP1Q8TBY8 1022 aa6.43□□□□□ -1.38
PTPN4-203ENST00000430976 DHX38Q92620 1227 aaKnown RBP6.42□□□□□ -1.38
PTPN4-203ENST00000430976 SIN3AQ96ST3 1273 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 ARPC5LQ9BPX5 153 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 GNL3LQ9NVN8 582 aaKnown RBP6.42□□□□□ -1.38
PTPN4-203ENST00000430976 CHPF2Q9P2E5 772 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 SFMBT1Q9UHJ3 866 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 OATP04181 439 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 CAPN2P17655 700 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 CTR9Q6PD62 1173 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 MRFAP1L1Q96HT8 127 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 KNSTRNQ9Y448 316 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 ICE2Q659A1 982 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 TTC19Q6DKK2 380 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-203ENST00000430976 CCDC91Q7Z6B0 441 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 VPS37AQ8NEZ2 397 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 ZNF396Q96N95 335 aaPredicted RBP6.42□□□□□ -1.38
PTPN4-203ENST00000430976 BICRAQ9NZM4 1560 aa6.42□□□□□ -1.38
PTPN4-203ENST00000430976 TRAK2O60296 914 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 ZSCAN20P17040 1043 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-203ENST00000430976 PPP1R12AO14974 1030 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-203ENST00000430976 LLGL2Q6P1M3 1020 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 VMP1Q96GC9 406 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 POGKQ9P215 609 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-203ENST00000430976 COPB2P35606 906 aa6.41□□□□□ -1.38
PTPN4-203ENST00000430976 CDC5LQ99459 802 aaKnown RBP6.41□□□□□ -1.38
PTPN4-203ENST00000430976 UBA5Q9GZZ9 404 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms