RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.92
MBD4-203ENST00000429544 SSH2Q76I76 1423 aa20.82■□□□□ 0.92
MBD4-203ENST00000429544 IPO9Q96P70 1041 aaKnown RBP20.82■□□□□ 0.92
MBD4-203ENST00000429544 FTSJ3Q8IY81 847 aaKnown RBP20.82■□□□□ 0.92
MBD4-203ENST00000429544 AAMPQ13685 434 aa20.81■□□□□ 0.92
MBD4-203ENST00000429544 DZIP1LQ8IYY4 767 aaKnown RBP20.81■□□□□ 0.92
MBD4-203ENST00000429544 NOP58Q9Y2X3 529 aaKnown RBP20.81■□□□□ 0.92
MBD4-203ENST00000429544 MVPQ14764 893 aaKnown RBP20.81■□□□□ 0.92
MBD4-203ENST00000429544 KCNA6P17658 529 aa20.8■□□□□ 0.92
MBD4-203ENST00000429544 EIF4A2Q14240 407 aaKnown RBP20.8■□□□□ 0.92
MBD4-203ENST00000429544 NGDNQ8NEJ9 315 aaKnown RBP20.8■□□□□ 0.92
MBD4-203ENST00000429544 SOX12O15370 315 aa20.79■□□□□ 0.92
MBD4-203ENST00000429544 MYT1Q01538 1121 aa20.79■□□□□ 0.92
MBD4-203ENST00000429544 PCDHB15Q9Y5E8 787 aa20.79■□□□□ 0.92
MBD4-203ENST00000429544 USP31Q70CQ4 1352 aa20.79■□□□□ 0.92
MBD4-203ENST00000429544 TTC21AQ8NDW8 1320 aa20.79■□□□□ 0.92
MBD4-203ENST00000429544 FMN2Q9NZ56 1722 aa20.78■□□□□ 0.92
MBD4-203ENST00000429544 TRIM27P14373 513 aa20.78■□□□□ 0.92
MBD4-203ENST00000429544 CALD1Q05682 793 aaKnown RBP20.78■□□□□ 0.92
MBD4-203ENST00000429544 ZNF142P52746 1687 aaPredicted RBP20.78■□□□□ 0.92
MBD4-203ENST00000429544 NOB1Q9ULX3 412 aaKnown RBP20.78■□□□□ 0.92
MBD4-203ENST00000429544 PAK3O75914 559 aaPredicted RBP20.77■□□□□ 0.92
MBD4-203ENST00000429544 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
MBD4-203ENST00000429544 AEBP1Q8IUX7 1158 aa20.77■□□□□ 0.91
MBD4-203ENST00000429544 PIK3C2AO00443 1686 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 RGPD1P0DJD0 1748 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 LMOD3Q0VAK6 560 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 FAM161AQ3B820 660 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
MBD4-203ENST00000429544 ANKARQ7Z5J8 1434 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 GNAI1P63096 354 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 HSP90AB2PQ58FF8 381 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 ALDH1L2Q3SY69 923 aa20.75■□□□□ 0.91
MBD4-203ENST00000429544 CHD2O14647 1828 aaKnown RBP20.74■□□□□ 0.91
MBD4-203ENST00000429544 C8orf34Q49A92 452 aa20.74■□□□□ 0.91
MBD4-203ENST00000429544 ADAMTSL3P82987 1691 aa20.74■□□□□ 0.91
MBD4-203ENST00000429544 FAM83GA6ND36 823 aa20.73■□□□□ 0.91
MBD4-203ENST00000429544 ITPRIPQ8IWB1 547 aa20.73■□□□□ 0.91
MBD4-203ENST00000429544 MBIPQ9NS73 344 aa20.73■□□□□ 0.91
MBD4-203ENST00000429544 ZNF853P0CG23 659 aa20.72■□□□□ 0.91
MBD4-203ENST00000429544 ANKLE2Q86XL3 938 aa20.72■□□□□ 0.91
MBD4-203ENST00000429544 ZBTB47Q9UFB7 747 aaPredicted RBP20.72■□□□□ 0.91
MBD4-203ENST00000429544 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
MBD4-203ENST00000429544 VIRMAQ69YN4 1812 aaKnown RBP20.72■□□□□ 0.91
MBD4-203ENST00000429544 DCTN1Q14203 1278 aa20.71■□□□□ 0.91
MBD4-203ENST00000429544 IPO8O15397 1037 aaKnown RBP20.71■□□□□ 0.91
MBD4-203ENST00000429544 RWDD1Q9H446 243 aaPredicted RBP20.71■□□□□ 0.91
MBD4-203ENST00000429544 TMEM57Q8N5G2 664 aa20.7■□□□□ 0.9
MBD4-203ENST00000429544 TSPYL6Q8N831 410 aa20.7■□□□□ 0.9
MBD4-203ENST00000429544 DDX19BQ9UMR2 479 aa20.7■□□□□ 0.9
MBD4-203ENST00000429544 VAMP4O75379 141 aa20.7■□□□□ 0.9
MBD4-203ENST00000429544 ZNF428Q96B54 188 aa20.69■□□□□ 0.9
MBD4-203ENST00000429544 CFAP44Q96MT7 982 aa20.69■□□□□ 0.9
MBD4-203ENST00000429544 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
MBD4-203ENST00000429544 MARF1Q9Y4F3 1742 aaKnown RBP20.69■□□□□ 0.9
MBD4-203ENST00000429544 FLT4P35916 1363 aa20.68■□□□□ 0.9
MBD4-203ENST00000429544 ELL2O00472 640 aaPredicted RBP20.67■□□□□ 0.9
MBD4-203ENST00000429544 ARHGEF10O15013 1369 aa20.67■□□□□ 0.9
MBD4-203ENST00000429544 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
MBD4-203ENST00000429544 NLRP6P59044 892 aa20.66■□□□□ 0.9
MBD4-203ENST00000429544 MRPL50Q8N5N7 158 aaKnown RBP20.66■□□□□ 0.9
MBD4-203ENST00000429544 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
MBD4-203ENST00000429544 BRPF1P55201 1214 aaPredicted RBP20.66■□□□□ 0.9
MBD4-203ENST00000429544 NUTM2GQ5VZR2 741 aa20.66■□□□□ 0.9
MBD4-203ENST00000429544 AMPHP49418 695 aa20.65■□□□□ 0.9
MBD4-203ENST00000429544 TWISTNBQ3B726 338 aaPredicted RBP20.65■□□□□ 0.9
MBD4-203ENST00000429544 C8orf58Q8NAV2 365 aa20.65■□□□□ 0.9
MBD4-203ENST00000429544 RBM33Q96EV2 1170 aaKnown RBP20.65■□□□□ 0.9
MBD4-203ENST00000429544 USP54Q70EL1 1684 aa20.65■□□□□ 0.9
MBD4-203ENST00000429544 MCM10Q7L590 875 aa20.63■□□□□ 0.89
MBD4-203ENST00000429544 ZBTB40Q9NUA8 1239 aa20.62■□□□□ 0.89
MBD4-203ENST00000429544 PHF8Q9UPP1 1060 aa20.61■□□□□ 0.89
MBD4-203ENST00000429544 ABTB2Q8N961 1025 aa20.61■□□□□ 0.89
MBD4-203ENST00000429544 HDAC1Q13547 482 aaPredicted RBP20.6■□□□□ 0.89
MBD4-203ENST00000429544 C14orf37Q86TY3 774 aa20.6■□□□□ 0.89
MBD4-203ENST00000429544 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
MBD4-203ENST00000429544 ARHGAP45Q92619 1136 aa20.59■□□□□ 0.89
MBD4-203ENST00000429544 EYA1Q99502 592 aa20.59■□□□□ 0.89
MBD4-203ENST00000429544 NPHP4O75161 1426 aaPredicted RBP20.59■□□□□ 0.89
MBD4-203ENST00000429544 ADGRL3Q9HAR2 1447 aa20.59■□□□□ 0.89
MBD4-203ENST00000429544 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
MBD4-203ENST00000429544 KDRP35968 1356 aa20.58■□□□□ 0.89
MBD4-203ENST00000429544 FOXO3O43524 673 aa20.58■□□□□ 0.88
MBD4-203ENST00000429544 CHL1O00533 1208 aa20.57■□□□□ 0.88
MBD4-203ENST00000429544 HOXC9P31274 260 aa20.57■□□□□ 0.88
MBD4-203ENST00000429544 MTHFSDQ2M296 383 aaKnown RBP20.57■□□□□ 0.88
MBD4-203ENST00000429544 LTN1O94822 1766 aa20.56■□□□□ 0.88
MBD4-203ENST00000429544 KRT24Q2M2I5 525 aa20.56■□□□□ 0.88
MBD4-203ENST00000429544 CRB1P82279 1406 aa20.56■□□□□ 0.88
MBD4-203ENST00000429544 ABCC4O15439 1325 aa20.55■□□□□ 0.88
MBD4-203ENST00000429544 KIF24Q5T7B8 1368 aa20.55■□□□□ 0.88
MBD4-203ENST00000429544 NWD1Q149M9 1564 aa20.53■□□□□ 0.88
MBD4-203ENST00000429544 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
MBD4-203ENST00000429544 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
MBD4-203ENST00000429544 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
MBD4-203ENST00000429544 API5Q9BZZ5 524 aaKnown RBP20.53■□□□□ 0.88
MBD4-203ENST00000429544 ZBTB7BO15156 539 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms