RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 RAD51AP2Q09MP3 1159 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 CAVIN1Q6NZI2 390 aaKnown RBP10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 SLC26A8Q96RN1 970 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 FAM53CQ9NYF3 392 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 LAMC1P11047 1609 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 ZFYVE16Q7Z3T8 1539 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 SATB1Q01826 763 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 CYP2C19P33261 490 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
CDC42BPA-206ENST00000429440 HNRNPH2P55795 449 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 NCBP1Q09161 790 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 CT47A1Q5JQC4 288 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 KIF18AQ8NI77 898 aa10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 ABCA9Q8IUA7 1624 aa10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 PRDM15P57071 1507 aaPredicted RBP10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 REC8O95072 547 aa10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDC42BPA-206ENST00000429440 DEPDC5O75140 1603 aa10.78□□□□□ -0.68
CDC42BPA-206ENST00000429440 ZNF521Q96K83 1311 aa10.78□□□□□ -0.68
CDC42BPA-206ENST00000429440 LMBRD1Q9NUN5 540 aa10.78□□□□□ -0.68
CDC42BPA-206ENST00000429440 GOLGA2Q08379 1002 aa10.78□□□□□ -0.68
CDC42BPA-206ENST00000429440 MUM1L1Q5H9M0 696 aa10.78□□□□□ -0.68
CDC42BPA-206ENST00000429440 RNF17Q9BXT8 1623 aaKnown RBP10.77□□□□□ -0.68
CDC42BPA-206ENST00000429440 SSFA2P28290 1259 aa10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 TMED8Q6PL24 325 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 TRMT2AQ8IZ69 625 aaKnown RBP10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 ERICH4A6NGS2 130 aa10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 MLECQ14165 292 aa10.77□□□□□ -0.69
CDC42BPA-206ENST00000429440 WDR7Q9Y4E6 1490 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 GOLGA6L6A8MZA4 724 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 KIF1CO43896 1103 aaKnown RBP10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 CASQ1P31415 396 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 DONSONQ9NYP3 566 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 KIF16BQ96L93 1317 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 RGL3Q3MIN7 710 aa10.76□□□□□ -0.69
CDC42BPA-206ENST00000429440 NUCB2P80303 420 aa10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 AFAP1Q8N556 730 aa10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 EIF2AK4Q9P2K8 1649 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-206ENST00000429440 VWDEQ8N2E2 1590 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 K7ELQ4 463 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 EP400NLQ6ZTU2 488 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 TESK2Q96S53 571 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 SPHKAPQ2M3C7 1700 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 MADDQ8WXG6 1647 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 TRPM2O94759 1503 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 FAM184AQ8NB25 1140 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 MNS1Q8NEH6 495 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 PLCD4Q9BRC7 762 aa10.74□□□□□ -0.69
CDC42BPA-206ENST00000429440 MROH1Q8NDA8 1641 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 CEP152O94986 1710 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 TPM3P06753 285 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 MCTP1Q6DN14 999 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 KIAA1524Q8TCG1 905 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 ATP7AQ04656 1500 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 PTPRTO14522 1441 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 KIF1BPQ96EK5 621 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 TRERF1Q96PN7 1200 aa10.73□□□□□ -0.69
CDC42BPA-206ENST00000429440 CLTCL1P53675 1640 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 FANCAO15360 1455 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 SPAG9O60271 1321 aaKnown RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 DISP3Q9P2K9 1392 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 CYP2E1P05181 493 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 MED4Q9NPJ6 270 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 TET3O43151 1660 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 PER1O15534 1290 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 GOLGA6L1Q8N7Z2 621 aa10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 RWDD1Q9H446 243 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
CDC42BPA-206ENST00000429440 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 SMTNL1A8MU46 457 aa10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 MBD3O95983 291 aa10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 MAP2K1Q02750 393 aaPredicted RBP10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 GPT2Q8TD30 523 aa10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 NOL10Q9BSC4 688 aaKnown RBP10.71□□□□□ -0.69
CDC42BPA-206ENST00000429440 SYCE3A1L190 88 aa10.71□□□□□ -0.7
CDC42BPA-206ENST00000429440 TXLNBQ8N3L3 684 aa10.71□□□□□ -0.7
CDC42BPA-206ENST00000429440 TSPY26PQ9H489 355 aa10.71□□□□□ -0.7
CDC42BPA-206ENST00000429440 JRKLQ9Y4A0 524 aa10.71□□□□□ -0.7
CDC42BPA-206ENST00000429440 MYO1CO00159 1063 aa10.7□□□□□ -0.7
CDC42BPA-206ENST00000429440 TTC12Q9H892 705 aaPredicted RBP10.7□□□□□ -0.7
CDC42BPA-206ENST00000429440 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
CDC42BPA-206ENST00000429440 GSCP56915 257 aaPredicted RBP10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
CDC42BPA-206ENST00000429440 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
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