RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 TMEM63CQ9P1W3 806 aa15.31■□□□□ 0.04
LRTOMT-206ENST00000427369 MED14O60244 1454 aa15.31■□□□□ 0.04
LRTOMT-206ENST00000427369 DYNC1I1O14576 645 aa15.31■□□□□ 0.04
LRTOMT-206ENST00000427369 NSFL1CQ9UNZ2 370 aaKnown RBP15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 VWDEQ8N2E2 1590 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 LRSAM1Q6UWE0 723 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 USP26Q9BXU7 913 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 SETBP1Q9Y6X0 1596 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 CCDC39Q9UFE4 941 aa15.3■□□□□ 0.04
LRTOMT-206ENST00000427369 NUTM2DQ5VT03 806 aaPredicted RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 SASS6Q6UVJ0 657 aa15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 THUMPD2Q9BTF0 503 aaKnown RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 INO80Q9ULG1 1556 aaPredicted RBP15.29■□□□□ 0.04
LRTOMT-206ENST00000427369 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
LRTOMT-206ENST00000427369 MCM5P33992 734 aa15.28■□□□□ 0.04
LRTOMT-206ENST00000427369 VAMP4O75379 141 aa15.28■□□□□ 0.04
LRTOMT-206ENST00000427369 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
LRTOMT-206ENST00000427369 PPRC1Q5VV67 1664 aaKnown RBP15.28■□□□□ 0.04
LRTOMT-206ENST00000427369 MTERF4Q7Z6M4 381 aaKnown RBP15.27■□□□□ 0.04
LRTOMT-206ENST00000427369 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
LRTOMT-206ENST00000427369 ATAD2Q6PL18 1390 aa15.27■□□□□ 0.04
LRTOMT-206ENST00000427369 ST18O60284 1047 aa15.27■□□□□ 0.03
LRTOMT-206ENST00000427369 PTMAP06454 111 aaKnown RBP15.27■□□□□ 0.03
LRTOMT-206ENST00000427369 TTC22Q5TAA0 569 aa15.27■□□□□ 0.03
LRTOMT-206ENST00000427369 A0A1W2PP64 1363 aa15.27■□□□□ 0.03
LRTOMT-206ENST00000427369 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 SMAP1Q8IYB5 467 aaPredicted RBP15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 INTS3Q68E01 1043 aaKnown RBP15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 TULP4Q9NRJ4 1543 aa15.26■□□□□ 0.03
LRTOMT-206ENST00000427369 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 OTUD7AQ8TE49 926 aaPredicted RBP15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 PRKAR2BP31323 418 aa15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 MPNDQ8N594 471 aa15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 ARHGAP45Q92619 1136 aa15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 APBB1O00213 710 aa15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 DNTTIP2Q5QJE6 756 aaKnown RBP15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
LRTOMT-206ENST00000427369 FYB1O15117 783 aa15.24■□□□□ 0.03
LRTOMT-206ENST00000427369 PODXL2Q9NZ53 605 aa15.24■□□□□ 0.03
LRTOMT-206ENST00000427369 EFCAB6Q5THR3 1501 aa15.24■□□□□ 0.03
LRTOMT-206ENST00000427369 ABCC4O15439 1325 aa15.24■□□□□ 0.03
LRTOMT-206ENST00000427369 CFAP65Q6ZU64 1925 aaKnown RBP15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 MROH1Q8NDA8 1641 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 PTCH1Q13635 1447 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 SDSP20132 328 aa15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRTOMT-206ENST00000427369 KIAA2012Q0VF49 1180 aa15.22■□□□□ 0.03
LRTOMT-206ENST00000427369 TSC1Q92574 1164 aa15.22■□□□□ 0.03
LRTOMT-206ENST00000427369 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
LRTOMT-206ENST00000427369 ZCCHC11Q5TAX3 1644 aaKnown RBP15.22■□□□□ 0.03
LRTOMT-206ENST00000427369 FCHSD2O94868 740 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 HMOX1P09601 288 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 FBLN1P23142 703 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 CASC1Q6TDU7 716 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 PHACTR3Q96KR7 559 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 STK26Q9P289 416 aa15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
LRTOMT-206ENST00000427369 MBD3O95983 291 aa15.21■□□□□ 0.02
LRTOMT-206ENST00000427369 CCDC94Q9BW85 323 aaPredicted RBP15.21■□□□□ 0.02
LRTOMT-206ENST00000427369 TSPY26PQ9H489 355 aa15.21■□□□□ 0.02
LRTOMT-206ENST00000427369 REREQ9P2R6 1566 aa15.21■□□□□ 0.02
LRTOMT-206ENST00000427369 FOXD4L6Q3SYB3 417 aaPredicted RBP15.2■□□□□ 0.02
LRTOMT-206ENST00000427369 FOXD4L3Q6VB84 417 aaPredicted RBP15.2■□□□□ 0.02
LRTOMT-206ENST00000427369 ZNF830Q96NB3 372 aaPredicted RBP15.2■□□□□ 0.02
LRTOMT-206ENST00000427369 TWISTNBQ3B726 338 aaPredicted RBP15.2■□□□□ 0.02
LRTOMT-206ENST00000427369 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
LRTOMT-206ENST00000427369 PPLO60437 1756 aa15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 GLI2P10070 1586 aa15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 FANCAO15360 1455 aa15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 C8orf58Q8NAV2 365 aa15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 MYRIPQ8NFW9 859 aa15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
LRTOMT-206ENST00000427369 LRRC7Q96NW7 1537 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 NEK4P51957 841 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 REC8O95072 547 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 GNAI1P63096 354 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 TMX3Q96JJ7 454 aa15.18■□□□□ 0.02
LRTOMT-206ENST00000427369 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
LRTOMT-206ENST00000427369 FAM177BA6PVY3 158 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms