RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 KIF24Q5T7B8 1368 aa12.32□□□□□ -0.44
HMGB4-201ENST00000425537 FOXO3O43524 673 aa12.32□□□□□ -0.44
HMGB4-201ENST00000425537 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
HMGB4-201ENST00000425537 IL16Q14005 1332 aa12.32□□□□□ -0.44
HMGB4-201ENST00000425537 KIF1AQ12756 1690 aa12.32□□□□□ -0.44
HMGB4-201ENST00000425537 IRX6P78412 446 aaPredicted RBP12.31□□□□□ -0.44
HMGB4-201ENST00000425537 LMOD3Q0VAK6 560 aa12.31□□□□□ -0.44
HMGB4-201ENST00000425537 CT47B1P0C2W7 299 aaPredicted RBP12.3□□□□□ -0.44
HMGB4-201ENST00000425537 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
HMGB4-201ENST00000425537 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
HMGB4-201ENST00000425537 IL13P35225 146 aa12.29□□□□□ -0.44
HMGB4-201ENST00000425537 TMPOP42166 694 aaKnown RBP12.29□□□□□ -0.44
HMGB4-201ENST00000425537 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
HMGB4-201ENST00000425537 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
HMGB4-201ENST00000425537 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
HMGB4-201ENST00000425537 PXDNQ92626 1479 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 NLRP6P59044 892 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 PSME1Q06323 249 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 FLT4P35916 1363 aa12.28□□□□□ -0.44
HMGB4-201ENST00000425537 PIK3C2AO00443 1686 aa12.27□□□□□ -0.45
HMGB4-201ENST00000425537 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
HMGB4-201ENST00000425537 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
HMGB4-201ENST00000425537 KRT28Q7Z3Y7 464 aa12.27□□□□□ -0.45
HMGB4-201ENST00000425537 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
HMGB4-201ENST00000425537 RSPH6AQ9H0K4 717 aa12.27□□□□□ -0.45
HMGB4-201ENST00000425537 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
HMGB4-201ENST00000425537 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 AMPHP49418 695 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 RIPK4P57078 832 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
HMGB4-201ENST00000425537 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 NUTM2GQ5VZR2 741 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 KCNH5Q8NCM2 988 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
HMGB4-201ENST00000425537 RTL1A6NKG5 1358 aa12.26□□□□□ -0.45
HMGB4-201ENST00000425537 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
HMGB4-201ENST00000425537 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
HMGB4-201ENST00000425537 ARHGEF10O15013 1369 aa12.24□□□□□ -0.45
HMGB4-201ENST00000425537 MS4A1P11836 297 aa12.24□□□□□ -0.45
HMGB4-201ENST00000425537 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
HMGB4-201ENST00000425537 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
HMGB4-201ENST00000425537 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
HMGB4-201ENST00000425537 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
HMGB4-201ENST00000425537 LRP6O75581 1613 aa12.22□□□□□ -0.45
HMGB4-201ENST00000425537 HMOX1P09601 288 aa12.22□□□□□ -0.45
HMGB4-201ENST00000425537 FBLN1P23142 703 aa12.22□□□□□ -0.45
HMGB4-201ENST00000425537 AAMPQ13685 434 aa12.22□□□□□ -0.45
HMGB4-201ENST00000425537 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
HMGB4-201ENST00000425537 MED1Q15648 1581 aaPredicted RBP12.22□□□□□ -0.45
HMGB4-201ENST00000425537 TNS3Q68CZ2 1445 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 JCADQ9P266 1359 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
HMGB4-201ENST00000425537 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
HMGB4-201ENST00000425537 GNAI1P63096 354 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 PDE3AQ14432 1141 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
HMGB4-201ENST00000425537 TRIM35Q9UPQ4 493 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
HMGB4-201ENST00000425537 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
HMGB4-201ENST00000425537 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
HMGB4-201ENST00000425537 PEAK1Q9H792 1746 aa12.2□□□□□ -0.46
HMGB4-201ENST00000425537 SPATA31A3Q5VYP0 1347 aa12.2□□□□□ -0.46
HMGB4-201ENST00000425537 SOX12O15370 315 aa12.19□□□□□ -0.46
HMGB4-201ENST00000425537 ADAMTS2O95450 1211 aa12.19□□□□□ -0.46
HMGB4-201ENST00000425537 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
HMGB4-201ENST00000425537 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
HMGB4-201ENST00000425537 LRRC59Q96AG4 307 aaKnown RBP12.19□□□□□ -0.46
HMGB4-201ENST00000425537 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
HMGB4-201ENST00000425537 MARF1Q9Y4F3 1742 aaKnown RBP12.19□□□□□ -0.46
HMGB4-201ENST00000425537 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
HMGB4-201ENST00000425537 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
HMGB4-201ENST00000425537 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
HMGB4-201ENST00000425537 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
HMGB4-201ENST00000425537 EXOC6Q8TAG9 804 aa12.18□□□□□ -0.46
HMGB4-201ENST00000425537 HOXC9P31274 260 aa12.17□□□□□ -0.46
HMGB4-201ENST00000425537 RARSP54136 660 aaKnown RBP12.17□□□□□ -0.46
HMGB4-201ENST00000425537 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
HMGB4-201ENST00000425537 GAS2L2Q8NHY3 880 aa12.17□□□□□ -0.46
HMGB4-201ENST00000425537 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
HMGB4-201ENST00000425537 COL22A1Q8NFW1 1626 aaPredicted RBP12.17□□□□□ -0.46
HMGB4-201ENST00000425537 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
HMGB4-201ENST00000425537 KDRP35968 1356 aa12.17□□□□□ -0.46
HMGB4-201ENST00000425537 SLIT3O75094 1523 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 LTN1O94822 1766 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
HMGB4-201ENST00000425537 PLIN1O60240 522 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 IP6K1Q92551 441 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 NFAT5O94916 1531 aa12.16□□□□□ -0.46
HMGB4-201ENST00000425537 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
HMGB4-201ENST00000425537 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
HMGB4-201ENST00000425537 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
HMGB4-201ENST00000425537 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
HMGB4-201ENST00000425537 USP19O94966 1318 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms