RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
COL12A1-205ENST00000425443 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
COL12A1-205ENST00000425443 BECN1Q14457 450 aa16.37■□□□□ 0.21
COL12A1-205ENST00000425443 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
COL12A1-205ENST00000425443 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
COL12A1-205ENST00000425443 ATP7BP35670 1465 aa16.36■□□□□ 0.21
COL12A1-205ENST00000425443 PNPLA6Q8IY17 1366 aa16.36■□□□□ 0.21
COL12A1-205ENST00000425443 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
COL12A1-205ENST00000425443 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
COL12A1-205ENST00000425443 CALD1Q05682 793 aaKnown RBP16.35■□□□□ 0.21
COL12A1-205ENST00000425443 PHACTR3Q96KR7 559 aa16.35■□□□□ 0.21
COL12A1-205ENST00000425443 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
COL12A1-205ENST00000425443 TNRQ92752 1358 aa16.35■□□□□ 0.21
COL12A1-205ENST00000425443 HSP90AA2PQ14568 343 aaPredicted RBP16.35■□□□□ 0.21
COL12A1-205ENST00000425443 NFE2L2Q16236 605 aa16.34■□□□□ 0.21
COL12A1-205ENST00000425443 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
COL12A1-205ENST00000425443 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
COL12A1-205ENST00000425443 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
COL12A1-205ENST00000425443 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
COL12A1-205ENST00000425443 NAP1L2Q9ULW6 460 aaPredicted RBP16.33■□□□□ 0.21
COL12A1-205ENST00000425443 SOX12O15370 315 aa16.33■□□□□ 0.2
COL12A1-205ENST00000425443 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
COL12A1-205ENST00000425443 LNPKQ9C0E8 428 aa16.32■□□□□ 0.2
COL12A1-205ENST00000425443 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
COL12A1-205ENST00000425443 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
COL12A1-205ENST00000425443 GNAI1P63096 354 aa16.31■□□□□ 0.2
COL12A1-205ENST00000425443 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
COL12A1-205ENST00000425443 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
COL12A1-205ENST00000425443 IL13P35225 146 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 SLC26A8Q96RN1 970 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 LRRC7Q96NW7 1537 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 HDAC1Q13547 482 aaPredicted RBP16.3■□□□□ 0.2
COL12A1-205ENST00000425443 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 CEBPAP49715 358 aaPredicted RBP16.3■□□□□ 0.2
COL12A1-205ENST00000425443 GZF1Q9H116 711 aaPredicted RBP16.3■□□□□ 0.2
COL12A1-205ENST00000425443 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
COL12A1-205ENST00000425443 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
COL12A1-205ENST00000425443 ZBTB40Q9NUA8 1239 aa16.29■□□□□ 0.2
COL12A1-205ENST00000425443 TMEM2Q9UHN6 1383 aa16.29■□□□□ 0.2
COL12A1-205ENST00000425443 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
COL12A1-205ENST00000425443 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
COL12A1-205ENST00000425443 NAP1L5Q96NT1 182 aaPredicted RBP16.28■□□□□ 0.2
COL12A1-205ENST00000425443 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
COL12A1-205ENST00000425443 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
COL12A1-205ENST00000425443 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 IFT57Q9NWB7 429 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 FAM83GA6ND36 823 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 TSPYL6Q8N831 410 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
COL12A1-205ENST00000425443 TWISTNBQ3B726 338 aaPredicted RBP16.25■□□□□ 0.19
COL12A1-205ENST00000425443 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 ACEP12821 1306 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 ROBO2Q9HCK4 1378 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 LTKP29376 864 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 SULT6B1Q6IMI4 303 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 VAMP4O75379 141 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 AATKQ6ZMQ8 1374 aa16.25■□□□□ 0.19
COL12A1-205ENST00000425443 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
COL12A1-205ENST00000425443 MCM4P33991 863 aa16.24■□□□□ 0.19
COL12A1-205ENST00000425443 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
COL12A1-205ENST00000425443 RRAGDQ9NQL2 400 aaPredicted RBP16.24■□□□□ 0.19
COL12A1-205ENST00000425443 ANKRD45Q5TZF3 282 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 TTC21BQ7Z4L5 1316 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
COL12A1-205ENST00000425443 CPS1P31327 1500 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 PANK2Q9BZ23 570 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 NUCB1Q02818 461 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 CFAP44Q96MT7 982 aa16.23■□□□□ 0.19
COL12A1-205ENST00000425443 CDC42BPGQ6DT37 1551 aa16.22■□□□□ 0.19
COL12A1-205ENST00000425443 XRCC6P12956 609 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL12A1-205ENST00000425443 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
COL12A1-205ENST00000425443 NGDNQ8NEJ9 315 aaKnown RBP16.22■□□□□ 0.19
COL12A1-205ENST00000425443 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
COL12A1-205ENST00000425443 KIF13AQ9H1H9 1805 aa16.21■□□□□ 0.19
COL12A1-205ENST00000425443 APBB1O00213 710 aa16.21■□□□□ 0.19
COL12A1-205ENST00000425443 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
COL12A1-205ENST00000425443 MRPL50Q8N5N7 158 aaKnown RBP16.21■□□□□ 0.19
COL12A1-205ENST00000425443 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.18
COL12A1-205ENST00000425443 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.18
COL12A1-205ENST00000425443 TECPR2O15040 1411 aa16.2■□□□□ 0.18
COL12A1-205ENST00000425443 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
COL12A1-205ENST00000425443 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 DDIT3P35638 169 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 FSD2A1L4K1 749 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
COL12A1-205ENST00000425443 SIRT2Q8IXJ6 389 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 KIF2CQ99661 725 aa16.19■□□□□ 0.18
COL12A1-205ENST00000425443 ZBTB7BO15156 539 aaPredicted RBP16.18■□□□□ 0.18
COL12A1-205ENST00000425443 ARHGAP45Q92619 1136 aa16.18■□□□□ 0.18
COL12A1-205ENST00000425443 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
COL12A1-205ENST00000425443 CHMP5Q9NZZ3 219 aa16.18■□□□□ 0.18
COL12A1-205ENST00000425443 MCM10Q7L590 875 aa16.18■□□□□ 0.18
COL12A1-205ENST00000425443 ADAMTS13Q76LX8 1427 aa16.18■□□□□ 0.18
COL12A1-205ENST00000425443 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
COL12A1-205ENST00000425443 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms