RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 PDE3AQ14432 1141 aa21.34■■□□□ 1.01
CMTM3-202ENST00000424011 NCOA3Q9Y6Q9 1424 aa21.34■■□□□ 1.01
CMTM3-202ENST00000424011 STRCP1A6NGW2 1772 aa21.34■■□□□ 1.01
CMTM3-202ENST00000424011 HMOX1P09601 288 aa21.34■■□□□ 1.01
CMTM3-202ENST00000424011 CALD1Q05682 793 aaKnown RBP21.34■■□□□ 1.01
CMTM3-202ENST00000424011 TMEM94Q12767 1356 aa21.34■■□□□ 1.01
CMTM3-202ENST00000424011 RARSP54136 660 aaKnown RBP21.33■■□□□ 1.01
CMTM3-202ENST00000424011 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
CMTM3-202ENST00000424011 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
CMTM3-202ENST00000424011 CANXP27824 592 aaKnown RBP21.32■■□□□ 1
CMTM3-202ENST00000424011 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
CMTM3-202ENST00000424011 TCERG1O14776 1098 aaKnown RBP21.3■■□□□ 1
CMTM3-202ENST00000424011 ESCO1Q5FWF5 840 aa21.3■■□□□ 1
CMTM3-202ENST00000424011 PAK3O75914 559 aaPredicted RBP21.3■■□□□ 1
CMTM3-202ENST00000424011 EIF4A2Q14240 407 aaKnown RBP21.29■■□□□ 1
CMTM3-202ENST00000424011 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
CMTM3-202ENST00000424011 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
CMTM3-202ENST00000424011 IL27Q8NEV9 243 aa21.28■■□□□ 1
CMTM3-202ENST00000424011 SBNO1A3KN83 1393 aa21.28■■□□□ 1
CMTM3-202ENST00000424011 NLRP6P59044 892 aa21.27■■□□□ 1
CMTM3-202ENST00000424011 ORAI2Q96SN7 254 aa21.27■□□□□ 0.99
CMTM3-202ENST00000424011 FLT4P35916 1363 aa21.27■□□□□ 0.99
CMTM3-202ENST00000424011 KIF24Q5T7B8 1368 aa21.27■□□□□ 0.99
CMTM3-202ENST00000424011 RTL5Q5HYW3 569 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-202ENST00000424011 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
CMTM3-202ENST00000424011 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
CMTM3-202ENST00000424011 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
CMTM3-202ENST00000424011 PIK3C2AO00443 1686 aa21.26■□□□□ 0.99
CMTM3-202ENST00000424011 ATF3P18847 181 aa21.26■□□□□ 0.99
CMTM3-202ENST00000424011 DCCP43146 1447 aa21.26■□□□□ 0.99
CMTM3-202ENST00000424011 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
CMTM3-202ENST00000424011 AAMPQ13685 434 aa21.24■□□□□ 0.99
CMTM3-202ENST00000424011 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
CMTM3-202ENST00000424011 ABTB2Q8N961 1025 aa21.24■□□□□ 0.99
CMTM3-202ENST00000424011 FRAT1Q92837 279 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-202ENST00000424011 C1orf167Q5SNV9 1468 aa21.24■□□□□ 0.99
CMTM3-202ENST00000424011 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
CMTM3-202ENST00000424011 SOX12O15370 315 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 AMPHP49418 695 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 MS4A1P11836 297 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 PSME1Q06323 249 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 ARHGEF10O15013 1369 aa21.23■□□□□ 0.99
CMTM3-202ENST00000424011 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
CMTM3-202ENST00000424011 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
CMTM3-202ENST00000424011 ZNF428Q96B54 188 aa21.22■□□□□ 0.99
CMTM3-202ENST00000424011 PEAK1Q9H792 1746 aa21.22■□□□□ 0.99
CMTM3-202ENST00000424011 GNAI1P63096 354 aa21.22■□□□□ 0.99
CMTM3-202ENST00000424011 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
CMTM3-202ENST00000424011 MST1RQ04912 1400 aa21.21■□□□□ 0.99
CMTM3-202ENST00000424011 MSH6P52701 1360 aa21.2■□□□□ 0.99
CMTM3-202ENST00000424011 FOXO3O43524 673 aa21.2■□□□□ 0.98
CMTM3-202ENST00000424011 PDE4AP27815 886 aa21.2■□□□□ 0.98
CMTM3-202ENST00000424011 PANK1Q8TE04 598 aa21.19■□□□□ 0.98
CMTM3-202ENST00000424011 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
CMTM3-202ENST00000424011 SMC4Q9NTJ3 1288 aa21.18■□□□□ 0.98
CMTM3-202ENST00000424011 BCL2L13Q9BXK5 485 aa21.18■□□□□ 0.98
CMTM3-202ENST00000424011 RGPD1P0DJD0 1748 aa21.18■□□□□ 0.98
CMTM3-202ENST00000424011 ALDH1L2Q3SY69 923 aa21.17■□□□□ 0.98
CMTM3-202ENST00000424011 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
CMTM3-202ENST00000424011 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-202ENST00000424011 BACH2Q9BYV9 841 aa21.17■□□□□ 0.98
CMTM3-202ENST00000424011 COG6Q9Y2V7 657 aa21.17■□□□□ 0.98
CMTM3-202ENST00000424011 LAS1LQ9Y4W2 734 aaKnown RBP21.17■□□□□ 0.98
CMTM3-202ENST00000424011 CFAP44Q96MT7 982 aa21.16■□□□□ 0.98
CMTM3-202ENST00000424011 RTN4Q9NQC3 1192 aaKnown RBP21.16■□□□□ 0.98
CMTM3-202ENST00000424011 ZNF853P0CG23 659 aa21.16■□□□□ 0.98
CMTM3-202ENST00000424011 XIRP1Q702N8 1843 aaKnown RBP21.16■□□□□ 0.98
CMTM3-202ENST00000424011 RTL1A6NKG5 1358 aa21.15■□□□□ 0.98
CMTM3-202ENST00000424011 NUTM2GQ5VZR2 741 aa21.15■□□□□ 0.98
CMTM3-202ENST00000424011 CLUAP1Q96AJ1 413 aa21.15■□□□□ 0.98
CMTM3-202ENST00000424011 KIF16BQ96L93 1317 aa21.15■□□□□ 0.98
CMTM3-202ENST00000424011 SSH1Q8WYL5 1049 aa21.15■□□□□ 0.98
CMTM3-202ENST00000424011 KDRP35968 1356 aa21.14■□□□□ 0.98
CMTM3-202ENST00000424011 HOXC9P31274 260 aa21.14■□□□□ 0.97
CMTM3-202ENST00000424011 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
CMTM3-202ENST00000424011 IPO9Q96P70 1041 aaKnown RBP21.14■□□□□ 0.97
CMTM3-202ENST00000424011 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
CMTM3-202ENST00000424011 IGSF1Q8N6C5 1336 aa21.14■□□□□ 0.97
CMTM3-202ENST00000424011 IPO8O15397 1037 aaKnown RBP21.13■□□□□ 0.97
CMTM3-202ENST00000424011 FTSJ3Q8IY81 847 aaKnown RBP21.13■□□□□ 0.97
CMTM3-202ENST00000424011 KIF1AQ12756 1690 aa21.13■□□□□ 0.97
CMTM3-202ENST00000424011 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
CMTM3-202ENST00000424011 KRT28Q7Z3Y7 464 aa21.13■□□□□ 0.97
CMTM3-202ENST00000424011 THUMPD2Q9BTF0 503 aaKnown RBP21.13■□□□□ 0.97
CMTM3-202ENST00000424011 XPCQ01831 940 aaPredicted RBP21.12■□□□□ 0.97
CMTM3-202ENST00000424011 DZIP1LQ8IYY4 767 aaKnown RBP21.12■□□□□ 0.97
CMTM3-202ENST00000424011 MARF1Q9Y4F3 1742 aaKnown RBP21.12■□□□□ 0.97
CMTM3-202ENST00000424011 BRPF1P55201 1214 aaPredicted RBP21.11■□□□□ 0.97
CMTM3-202ENST00000424011 MBIPQ9NS73 344 aa21.11■□□□□ 0.97
CMTM3-202ENST00000424011 RLBP1P12271 317 aa21.11■□□□□ 0.97
CMTM3-202ENST00000424011 EYA1Q99502 592 aa21.11■□□□□ 0.97
CMTM3-202ENST00000424011 IGHDP01880 384 aa21.1■□□□□ 0.97
CMTM3-202ENST00000424011 ATF7IPQ6VMQ6 1270 aa21.1■□□□□ 0.97
CMTM3-202ENST00000424011 MVPQ14764 893 aaKnown RBP21.1■□□□□ 0.97
CMTM3-202ENST00000424011 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-202ENST00000424011 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
CMTM3-202ENST00000424011 GAS2L2Q8NHY3 880 aa21.09■□□□□ 0.97
CMTM3-202ENST00000424011 ZBTB47Q9UFB7 747 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms