RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 MAGI1Q96QZ7 1491 aaPredicted RBP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 ANKRD30AQ9BXX3 1397 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 FAM98CQ17RN3 349 aaKnown RBP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 KCNH5Q8NCM2 988 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 TMOD3Q9NYL9 352 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 EIF4G3O43432 1585 aaKnown RBP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 PER1O15534 1290 aaPredicted RBP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.5□□□□□ -1.69
TOP2A-201ENST00000423485 SLC5A4Q9NY91 659 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 IQGAP2Q13576 1575 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 CABP4P57796 275 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 TSHZ2Q9NRE2 1034 aa4.5□□□□□ -1.69
TOP2A-201ENST00000423485 CEP152O94986 1710 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 HFM1A2PYH4 1435 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 SCAPERQ9BY12 1400 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 FMNL1O95466 1100 aaPredicted RBP4.49□□□□□ -1.69
TOP2A-201ENST00000423485 NBPF3Q9H094 633 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 SPC25Q9HBM1 224 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 ZNF316A6NFI3 1004 aaPredicted RBP4.49□□□□□ -1.69
TOP2A-201ENST00000423485 KCNQ2O43526 872 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 GTPBP6O43824 516 aaPredicted RBP4.49□□□□□ -1.69
TOP2A-201ENST00000423485 STARD3NLO95772 234 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 RTCBQ9Y3I0 505 aaKnown RBP4.49□□□□□ -1.69
TOP2A-201ENST00000423485 TNNI2P48788 182 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 FMN1Q68DA7 1419 aa4.49□□□□□ -1.69
TOP2A-201ENST00000423485 MAGI2Q86UL8 1455 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 VWDEQ8N2E2 1590 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 BRDTQ58F21 947 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 DALRD3Q5D0E6 543 aaKnown RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 SULF1Q8IWU6 871 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 TNRC18O15417 2968 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 PPRC1Q5VV67 1664 aaKnown RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 GLRX3O76003 335 aaKnown RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 SEC24BO95487 1268 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 SEPT12Q8IYM1 358 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 CCDC43Q96MW1 224 aaKnown RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 FRMPD1Q5SYB0 1578 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 ARHGAP5Q13017 1502 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 XPCQ01831 940 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 ZSCAN29Q8IWY8 852 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 NIM1KQ8IY84 436 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 NOD1Q9Y239 953 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 CELSR1Q9NYQ6 3014 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 PDE3AQ14432 1141 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 ARMC9Q7Z3E5 817 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 PLEKHH2Q8IVE3 1493 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 MARCH6O60337 910 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 TRIM37O94972 964 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 IKQ13123 557 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 TMEM132AQ24JP5 1023 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 NBPF1Q3BBV0 1214 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 PLEKHO1Q53GL0 409 aaPredicted RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 TRAPPC3LQ5T215 181 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 FAM200AQ8TCP9 573 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 RNF181Q9P0P0 153 aa4.48□□□□□ -1.69
TOP2A-201ENST00000423485 LAS1LQ9Y4W2 734 aaKnown RBP4.48□□□□□ -1.69
TOP2A-201ENST00000423485 PAF1Q8N7H5 531 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 EYA3Q99504 573 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 KNSTRNQ9Y448 316 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 USP19O94966 1318 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 ADGRL1O94910 1474 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 TRPM1Q7Z4N2 1603 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 U2SURPO15042 1029 aaKnown RBP4.47□□□□□ -1.69
TOP2A-201ENST00000423485 NEFLP07196 543 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 NEXNQ0ZGT2 675 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 NLRP1Q9C000 1473 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 FAM177BA6PVY3 158 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 ZC3H6P61129 1189 aaKnown RBP4.47□□□□□ -1.69
TOP2A-201ENST00000423485 RNF39Q9H2S5 420 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 TTC37Q6PGP7 1564 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 KCNA6P17658 529 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 SAMD9LQ8IVG5 1584 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 CCNL1Q9UK58 526 aaPredicted RBP4.47□□□□□ -1.69
TOP2A-201ENST00000423485 PDZRN3Q9UPQ7 1066 aa4.47□□□□□ -1.69
TOP2A-201ENST00000423485 DNMT1P26358 1616 aaKnown RBP4.47□□□□□ -1.69
TOP2A-201ENST00000423485 CFAP65Q6ZU64 1925 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 B4DLN1 442 aa4.46□□□□□ -1.69
TOP2A-201ENST00000423485 ZBTB7AO95365 584 aa4.46□□□□□ -1.69
TOP2A-201ENST00000423485 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 CALD1Q05682 793 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 NUTM2GQ5VZR2 741 aa4.46□□□□□ -1.69
TOP2A-201ENST00000423485 SYMPKQ92797 1274 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 DRC1Q96MC2 740 aa4.46□□□□□ -1.69
TOP2A-201ENST00000423485 GNL3LQ9NVN8 582 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 RNF17Q9BXT8 1623 aaKnown RBP4.46□□□□□ -1.69
TOP2A-201ENST00000423485 MROH2AA6NES4 1674 aa4.46□□□□□ -1.69
TOP2A-201ENST00000423485 ABCC5O15440 1437 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 EN1Q05925 392 aaPredicted RBP4.46□□□□□ -1.7
TOP2A-201ENST00000423485 GAS2L1Q99501 681 aaPredicted RBP4.46□□□□□ -1.7
TOP2A-201ENST00000423485 VEZTQ9HBM0 779 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 IVNS1ABPQ9Y6Y0 642 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 TCHHQ07283 1943 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 TCERG1O14776 1098 aaKnown RBP4.46□□□□□ -1.7
TOP2A-201ENST00000423485 IBSPP21815 317 aaPredicted RBP4.46□□□□□ -1.7
TOP2A-201ENST00000423485 DMWDQ09019 674 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 UNC5CLQ8IV45 518 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 RAB23Q9ULC3 237 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 PHF8Q9UPP1 1060 aa4.46□□□□□ -1.7
TOP2A-201ENST00000423485 RBM26Q5T8P6 1007 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms