RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 AKAP12Q02952 1782 aa23.75■■□□□ 1.39
RAF1-203ENST00000423275 C3P01024 1663 aa23.75■■□□□ 1.39
RAF1-203ENST00000423275 TSPYL6Q8N831 410 aa23.74■■□□□ 1.39
RAF1-203ENST00000423275 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
RAF1-203ENST00000423275 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
RAF1-203ENST00000423275 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
RAF1-203ENST00000423275 ZNF692Q9BU19 519 aaPredicted RBP23.72■■□□□ 1.39
RAF1-203ENST00000423275 ITSN1Q15811 1721 aa23.72■■□□□ 1.39
RAF1-203ENST00000423275 FRAT2O75474 233 aaPredicted RBP23.72■■□□□ 1.39
RAF1-203ENST00000423275 SLC26A8Q96RN1 970 aa23.72■■□□□ 1.39
RAF1-203ENST00000423275 ZBTB40Q9NUA8 1239 aa23.72■■□□□ 1.39
RAF1-203ENST00000423275 VAMP4O75379 141 aa23.71■■□□□ 1.39
RAF1-203ENST00000423275 HDAC1Q13547 482 aaPredicted RBP23.71■■□□□ 1.39
RAF1-203ENST00000423275 ELL2O00472 640 aaPredicted RBP23.7■■□□□ 1.38
RAF1-203ENST00000423275 IPO8O15397 1037 aaKnown RBP23.7■■□□□ 1.38
RAF1-203ENST00000423275 FAM83GA6ND36 823 aa23.7■■□□□ 1.38
RAF1-203ENST00000423275 TBC1D32Q96NH3 1257 aa23.7■■□□□ 1.38
RAF1-203ENST00000423275 MBIPQ9NS73 344 aa23.7■■□□□ 1.38
RAF1-203ENST00000423275 ACEP12821 1306 aa23.7■■□□□ 1.38
RAF1-203ENST00000423275 ZNF853P0CG23 659 aa23.69■■□□□ 1.38
RAF1-203ENST00000423275 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
RAF1-203ENST00000423275 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
RAF1-203ENST00000423275 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
RAF1-203ENST00000423275 PTPRUQ92729 1446 aa23.68■■□□□ 1.38
RAF1-203ENST00000423275 GSE1Q14687 1217 aa23.68■■□□□ 1.38
RAF1-203ENST00000423275 PLPPR3Q6T4P5 718 aa23.68■■□□□ 1.38
RAF1-203ENST00000423275 DCTN1Q14203 1278 aa23.67■■□□□ 1.38
RAF1-203ENST00000423275 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
RAF1-203ENST00000423275 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
RAF1-203ENST00000423275 GNAI1P63096 354 aa23.67■■□□□ 1.38
RAF1-203ENST00000423275 BECN1Q14457 450 aa23.67■■□□□ 1.38
RAF1-203ENST00000423275 AEBP1Q8IUX7 1158 aa23.66■■□□□ 1.38
RAF1-203ENST00000423275 MRPL50Q8N5N7 158 aaKnown RBP23.66■■□□□ 1.38
RAF1-203ENST00000423275 BRPF1P55201 1214 aaPredicted RBP23.65■■□□□ 1.38
RAF1-203ENST00000423275 CALD1Q05682 793 aaKnown RBP23.65■■□□□ 1.38
RAF1-203ENST00000423275 EIF4A2Q14240 407 aaKnown RBP23.65■■□□□ 1.38
RAF1-203ENST00000423275 SMC5Q8IY18 1101 aa23.65■■□□□ 1.38
RAF1-203ENST00000423275 C8orf58Q8NAV2 365 aa23.64■■□□□ 1.38
RAF1-203ENST00000423275 ZNF428Q96B54 188 aa23.64■■□□□ 1.38
RAF1-203ENST00000423275 PLEKHG3A1L390 1219 aa23.64■■□□□ 1.37
RAF1-203ENST00000423275 NRKQ7Z2Y5 1582 aa23.64■■□□□ 1.37
RAF1-203ENST00000423275 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.37
RAF1-203ENST00000423275 CFAP44Q96MT7 982 aa23.63■■□□□ 1.37
RAF1-203ENST00000423275 TOPAZ1Q8N9V7 1692 aa23.62■■□□□ 1.37
RAF1-203ENST00000423275 SULT6B1Q6IMI4 303 aa23.62■■□□□ 1.37
RAF1-203ENST00000423275 OVOS2A0A0J9YW53 1432 aa23.61■■□□□ 1.37
RAF1-203ENST00000423275 USP6P35125 1406 aa23.61■■□□□ 1.37
RAF1-203ENST00000423275 OVOS2Q6IE36 1432 aa23.61■■□□□ 1.37
RAF1-203ENST00000423275 TWISTNBQ3B726 338 aaPredicted RBP23.61■■□□□ 1.37
RAF1-203ENST00000423275 SOX12O15370 315 aa23.6■■□□□ 1.37
RAF1-203ENST00000423275 AMOTL2Q9Y2J4 779 aa23.6■■□□□ 1.37
RAF1-203ENST00000423275 HSP90AB2PQ58FF8 381 aa23.6■■□□□ 1.37
RAF1-203ENST00000423275 TBC1D2Q9BYX2 928 aa23.6■■□□□ 1.37
RAF1-203ENST00000423275 ZBTB7BO15156 539 aaPredicted RBP23.59■■□□□ 1.37
RAF1-203ENST00000423275 LMOD3Q0VAK6 560 aa23.59■■□□□ 1.37
RAF1-203ENST00000423275 EID1Q9Y6B2 187 aa23.59■■□□□ 1.37
RAF1-203ENST00000423275 IL27Q8NEV9 243 aa23.58■■□□□ 1.37
RAF1-203ENST00000423275 MFAP1P55081 439 aaKnown RBP23.58■■□□□ 1.37
RAF1-203ENST00000423275 C1orf115Q9H7X2 142 aa23.58■■□□□ 1.37
RAF1-203ENST00000423275 PTCH1Q13635 1447 aa23.57■■□□□ 1.36
RAF1-203ENST00000423275 PEAK1Q9H792 1746 aa23.57■■□□□ 1.36
RAF1-203ENST00000423275 ARHGAP45Q92619 1136 aa23.57■■□□□ 1.36
RAF1-203ENST00000423275 ANTXR1Q9H6X2 564 aa23.56■■□□□ 1.36
RAF1-203ENST00000423275 PIK3R4Q99570 1358 aa23.56■■□□□ 1.36
RAF1-203ENST00000423275 NUCB1Q02818 461 aa23.55■■□□□ 1.36
RAF1-203ENST00000423275 C22orf23Q9BZE7 217 aa23.55■■□□□ 1.36
RAF1-203ENST00000423275 LNPKQ9C0E8 428 aa23.55■■□□□ 1.36
RAF1-203ENST00000423275 SSH2Q76I76 1423 aa23.55■■□□□ 1.36
RAF1-203ENST00000423275 KRT24Q2M2I5 525 aa23.55■■□□□ 1.36
RAF1-203ENST00000423275 ABCC4O15439 1325 aa23.54■■□□□ 1.36
RAF1-203ENST00000423275 MCM10Q7L590 875 aa23.54■■□□□ 1.36
RAF1-203ENST00000423275 ARHGAP23Q9P227 1491 aa23.53■■□□□ 1.36
RAF1-203ENST00000423275 USP31Q70CQ4 1352 aa23.53■■□□□ 1.36
RAF1-203ENST00000423275 SLIT1O75093 1534 aa23.53■■□□□ 1.36
RAF1-203ENST00000423275 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
RAF1-203ENST00000423275 NALCNQ8IZF0 1738 aa23.52■■□□□ 1.36
RAF1-203ENST00000423275 CHD1LQ86WJ1 897 aa23.51■■□□□ 1.35
RAF1-203ENST00000423275 SIRT2Q8IXJ6 389 aa23.51■■□□□ 1.35
RAF1-203ENST00000423275 MAP3K19Q56UN5 1328 aa23.5■■□□□ 1.35
RAF1-203ENST00000423275 SPRYD3Q8NCJ5 442 aa23.5■■□□□ 1.35
RAF1-203ENST00000423275 RGPD8O14715 1765 aaPredicted RBP23.49■■□□□ 1.35
RAF1-203ENST00000423275 RGPD1P0DJD0 1748 aa23.48■■□□□ 1.35
RAF1-203ENST00000423275 CHL1O00533 1208 aa23.48■■□□□ 1.35
RAF1-203ENST00000423275 BRPF3Q9ULD4 1205 aa23.48■■□□□ 1.35
RAF1-203ENST00000423275 NGDNQ8NEJ9 315 aaKnown RBP23.47■■□□□ 1.35
RAF1-203ENST00000423275 FOXO3O43524 673 aa23.47■■□□□ 1.35
RAF1-203ENST00000423275 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
RAF1-203ENST00000423275 DIP2AQ14689 1571 aa23.46■■□□□ 1.35
RAF1-203ENST00000423275 ANKRD45Q5TZF3 282 aa23.46■■□□□ 1.35
RAF1-203ENST00000423275 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.35
RAF1-203ENST00000423275 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
RAF1-203ENST00000423275 THEMISQ8N1K5 641 aaPredicted RBP23.45■■□□□ 1.34
RAF1-203ENST00000423275 FER1L4A9Z1Z3 1794 aa23.44■■□□□ 1.34
RAF1-203ENST00000423275 RTN4Q9NQC3 1192 aaKnown RBP23.44■■□□□ 1.34
RAF1-203ENST00000423275 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
RAF1-203ENST00000423275 CHMP4BQ9H444 224 aaKnown RBP23.43■■□□□ 1.34
RAF1-203ENST00000423275 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
RAF1-203ENST00000423275 RIMS1Q86UR5 1692 aaKnown RBP23.43■■□□□ 1.34
RAF1-203ENST00000423275 KCNA6P17658 529 aa23.42■■□□□ 1.34
RAF1-203ENST00000423275 MTHFSDQ2M296 383 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms