RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 NLRP6P59044 892 aa11.63□□□□□ -0.55
SNX20-203ENST00000423026 FRAT1Q92837 279 aaPredicted RBP11.63□□□□□ -0.55
SNX20-203ENST00000423026 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
SNX20-203ENST00000423026 EIF4A2Q14240 407 aaKnown RBP11.62□□□□□ -0.55
SNX20-203ENST00000423026 TSR2Q969E8 191 aaKnown RBP11.62□□□□□ -0.55
SNX20-203ENST00000423026 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
SNX20-203ENST00000423026 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
SNX20-203ENST00000423026 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
SNX20-203ENST00000423026 AMPHP49418 695 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 ABTB2Q8N961 1025 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
SNX20-203ENST00000423026 MAP3K19Q56UN5 1328 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 MS4A1P11836 297 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
SNX20-203ENST00000423026 PIK3C2AO00443 1686 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 SBNO1A3KN83 1393 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 FLT4P35916 1363 aa11.61□□□□□ -0.55
SNX20-203ENST00000423026 ESCO1Q5FWF5 840 aa11.6□□□□□ -0.55
SNX20-203ENST00000423026 GNAI1P63096 354 aa11.6□□□□□ -0.55
SNX20-203ENST00000423026 PSME1Q06323 249 aa11.6□□□□□ -0.55
SNX20-203ENST00000423026 AAMPQ13685 434 aa11.6□□□□□ -0.55
SNX20-203ENST00000423026 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
SNX20-203ENST00000423026 PROSER2Q86WR7 435 aaPredicted RBP11.6□□□□□ -0.55
SNX20-203ENST00000423026 LAS1LQ9Y4W2 734 aaKnown RBP11.6□□□□□ -0.55
SNX20-203ENST00000423026 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
SNX20-203ENST00000423026 TCERG1O14776 1098 aaKnown RBP11.59□□□□□ -0.55
SNX20-203ENST00000423026 BCL2L13Q9BXK5 485 aa11.59□□□□□ -0.55
SNX20-203ENST00000423026 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
SNX20-203ENST00000423026 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 ZNF428Q96B54 188 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 COG6Q9Y2V7 657 aa11.58□□□□□ -0.56
SNX20-203ENST00000423026 USP54Q70EL1 1684 aa11.57□□□□□ -0.56
SNX20-203ENST00000423026 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
SNX20-203ENST00000423026 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
SNX20-203ENST00000423026 UBE2Q2Q8WVN8 375 aa11.57□□□□□ -0.56
SNX20-203ENST00000423026 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SNX20-203ENST00000423026 IPO8O15397 1037 aaKnown RBP11.56□□□□□ -0.56
SNX20-203ENST00000423026 ALDH1L2Q3SY69 923 aa11.56□□□□□ -0.56
SNX20-203ENST00000423026 FTSJ3Q8IY81 847 aaKnown RBP11.56□□□□□ -0.56
SNX20-203ENST00000423026 KDM2BQ8NHM5 1336 aa11.56□□□□□ -0.56
SNX20-203ENST00000423026 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
SNX20-203ENST00000423026 DZIP1LQ8IYY4 767 aaKnown RBP11.55□□□□□ -0.56
SNX20-203ENST00000423026 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
SNX20-203ENST00000423026 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
SNX20-203ENST00000423026 CFAP44Q96MT7 982 aa11.55□□□□□ -0.56
SNX20-203ENST00000423026 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
SNX20-203ENST00000423026 C19orf44Q9H6X5 657 aa11.55□□□□□ -0.56
SNX20-203ENST00000423026 KIF16BQ96L93 1317 aa11.55□□□□□ -0.56
SNX20-203ENST00000423026 ZNF853P0CG23 659 aa11.54□□□□□ -0.56
SNX20-203ENST00000423026 HOXC9P31274 260 aa11.54□□□□□ -0.56
SNX20-203ENST00000423026 KCNH5Q8NCM2 988 aa11.54□□□□□ -0.56
SNX20-203ENST00000423026 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
SNX20-203ENST00000423026 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
SNX20-203ENST00000423026 EYA1Q99502 592 aa11.54□□□□□ -0.56
SNX20-203ENST00000423026 ATF7IPQ6VMQ6 1270 aa11.53□□□□□ -0.56
SNX20-203ENST00000423026 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
SNX20-203ENST00000423026 MBIPQ9NS73 344 aa11.53□□□□□ -0.56
SNX20-203ENST00000423026 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
SNX20-203ENST00000423026 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
SNX20-203ENST00000423026 FAM83GA6ND36 823 aa11.52□□□□□ -0.56
SNX20-203ENST00000423026 RLBP1P12271 317 aa11.52□□□□□ -0.56
SNX20-203ENST00000423026 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.56
SNX20-203ENST00000423026 MVPQ14764 893 aaKnown RBP11.52□□□□□ -0.56
SNX20-203ENST00000423026 NOB1Q9ULX3 412 aaKnown RBP11.52□□□□□ -0.56
SNX20-203ENST00000423026 FOXO3O43524 673 aa11.52□□□□□ -0.57
SNX20-203ENST00000423026 ATF3P18847 181 aa11.52□□□□□ -0.57
SNX20-203ENST00000423026 DCTN1Q14203 1278 aa11.52□□□□□ -0.57
SNX20-203ENST00000423026 GAS2L2Q8NHY3 880 aa11.52□□□□□ -0.57
SNX20-203ENST00000423026 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
SNX20-203ENST00000423026 KDRP35968 1356 aa11.52□□□□□ -0.57
SNX20-203ENST00000423026 VAMP4O75379 141 aa11.51□□□□□ -0.57
SNX20-203ENST00000423026 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
SNX20-203ENST00000423026 TRIM27P14373 513 aa11.51□□□□□ -0.57
SNX20-203ENST00000423026 TWISTNBQ3B726 338 aaPredicted RBP11.51□□□□□ -0.57
SNX20-203ENST00000423026 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
SNX20-203ENST00000423026 IP6K1Q92551 441 aa11.51□□□□□ -0.57
SNX20-203ENST00000423026 DDX19BQ9UMR2 479 aa11.51□□□□□ -0.57
SNX20-203ENST00000423026 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
SNX20-203ENST00000423026 LTN1O94822 1766 aa11.5□□□□□ -0.57
SNX20-203ENST00000423026 KIF1AQ12756 1690 aa11.5□□□□□ -0.57
SNX20-203ENST00000423026 NCOA3Q9Y6Q9 1424 aa11.5□□□□□ -0.57
SNX20-203ENST00000423026 LTV1Q96GA3 475 aaPredicted RBP11.5□□□□□ -0.57
SNX20-203ENST00000423026 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
SNX20-203ENST00000423026 MTHFSDQ2M296 383 aaKnown RBP11.5□□□□□ -0.57
SNX20-203ENST00000423026 LMOD2Q6P5Q4 547 aa11.5□□□□□ -0.57
SNX20-203ENST00000423026 KRT28Q7Z3Y7 464 aa11.5□□□□□ -0.57
SNX20-203ENST00000423026 C1orf167Q5SNV9 1468 aa11.49□□□□□ -0.57
SNX20-203ENST00000423026 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
SNX20-203ENST00000423026 HTATSF1O43719 755 aaKnown RBP11.49□□□□□ -0.57
SNX20-203ENST00000423026 MCM10Q7L590 875 aa11.49□□□□□ -0.57
SNX20-203ENST00000423026 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
SNX20-203ENST00000423026 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
SNX20-203ENST00000423026 RWDD1Q9H446 243 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms