RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 SOX12O15370 315 aa29.76■■■□□ 2.35
LSM8-203ENST00000422760 PHF8Q9UPP1 1060 aa29.76■■■□□ 2.35
LSM8-203ENST00000422760 PHACTR3Q96KR7 559 aa29.75■■■□□ 2.35
LSM8-203ENST00000422760 EIF4A2Q14240 407 aaKnown RBP29.75■■■□□ 2.35
LSM8-203ENST00000422760 IL16Q14005 1332 aa29.74■■■□□ 2.35
LSM8-203ENST00000422760 C14orf37Q86TY3 774 aa29.73■■■□□ 2.35
LSM8-203ENST00000422760 DLG5Q8TDM6 1919 aa29.73■■■□□ 2.35
LSM8-203ENST00000422760 NFE2L2Q16236 605 aa29.73■■■□□ 2.35
LSM8-203ENST00000422760 MAP3K19Q56UN5 1328 aa29.73■■■□□ 2.35
LSM8-203ENST00000422760 TSR2Q969E8 191 aaKnown RBP29.71■■■□□ 2.35
LSM8-203ENST00000422760 NLRP6P59044 892 aa29.71■■■□□ 2.35
LSM8-203ENST00000422760 HSP90AB2PQ58FF8 381 aa29.71■■■□□ 2.35
LSM8-203ENST00000422760 SBNO1A3KN83 1393 aa29.7■■■□□ 2.35
LSM8-203ENST00000422760 RARSP54136 660 aaKnown RBP29.7■■■□□ 2.34
LSM8-203ENST00000422760 FLT4P35916 1363 aa29.7■■■□□ 2.34
LSM8-203ENST00000422760 AAMPQ13685 434 aa29.69■■■□□ 2.34
LSM8-203ENST00000422760 PDE3AQ14432 1141 aa29.67■■■□□ 2.34
LSM8-203ENST00000422760 ABTB2Q8N961 1025 aa29.67■■■□□ 2.34
LSM8-203ENST00000422760 PAK3O75914 559 aaPredicted RBP29.66■■■□□ 2.34
LSM8-203ENST00000422760 ESCO1Q5FWF5 840 aa29.66■■■□□ 2.34
LSM8-203ENST00000422760 NUTM2GQ5VZR2 741 aa29.65■■■□□ 2.34
LSM8-203ENST00000422760 AEBP1Q8IUX7 1158 aa29.65■■■□□ 2.34
LSM8-203ENST00000422760 DDRGK1Q96HY6 314 aa29.65■■■□□ 2.34
LSM8-203ENST00000422760 STRCP1A6NGW2 1772 aa29.64■■■□□ 2.34
LSM8-203ENST00000422760 CT47B1P0C2W7 299 aaPredicted RBP29.64■■■□□ 2.34
LSM8-203ENST00000422760 PROSER2Q86WR7 435 aaPredicted RBP29.64■■■□□ 2.34
LSM8-203ENST00000422760 SULT6B1Q6IMI4 303 aa29.63■■■□□ 2.33
LSM8-203ENST00000422760 CANXP27824 592 aaKnown RBP29.63■■■□□ 2.33
LSM8-203ENST00000422760 EXOSC9Q06265 439 aaKnown RBP29.63■■■□□ 2.33
LSM8-203ENST00000422760 ARHGEF10O15013 1369 aa29.62■■■□□ 2.33
LSM8-203ENST00000422760 AMPHP49418 695 aa29.61■■■□□ 2.33
LSM8-203ENST00000422760 BCL2L13Q9BXK5 485 aa29.61■■■□□ 2.33
LSM8-203ENST00000422760 LTN1O94822 1766 aa29.6■■■□□ 2.33
LSM8-203ENST00000422760 KIF24Q5T7B8 1368 aa29.6■■■□□ 2.33
LSM8-203ENST00000422760 FRAT1Q92837 279 aaPredicted RBP29.59■■■□□ 2.33
LSM8-203ENST00000422760 PSME1Q06323 249 aa29.58■■■□□ 2.33
LSM8-203ENST00000422760 LMOD3Q0VAK6 560 aa29.58■■■□□ 2.33
LSM8-203ENST00000422760 THUMPD2Q9BTF0 503 aaKnown RBP29.58■■■□□ 2.33
LSM8-203ENST00000422760 KIF1AQ12756 1690 aa29.57■■■□□ 2.32
LSM8-203ENST00000422760 CALD1Q05682 793 aaKnown RBP29.57■■■□□ 2.32
LSM8-203ENST00000422760 ORAI2Q96SN7 254 aa29.57■■■□□ 2.32
LSM8-203ENST00000422760 HSPA2P54652 639 aa29.57■■■□□ 2.32
LSM8-203ENST00000422760 NFAT5O94916 1531 aa29.56■■■□□ 2.32
LSM8-203ENST00000422760 C19orf44Q9H6X5 657 aa29.55■■■□□ 2.32
LSM8-203ENST00000422760 C1orf167Q5SNV9 1468 aa29.54■■■□□ 2.32
LSM8-203ENST00000422760 KDRP35968 1356 aa29.54■■■□□ 2.32
LSM8-203ENST00000422760 PANK1Q8TE04 598 aa29.54■■■□□ 2.32
LSM8-203ENST00000422760 HOXC9P31274 260 aa29.53■■■□□ 2.32
LSM8-203ENST00000422760 TRPM3Q9HCF6 1732 aaPredicted RBP29.53■■■□□ 2.32
LSM8-203ENST00000422760 TMEM94Q12767 1356 aa29.53■■■□□ 2.32
LSM8-203ENST00000422760 IGSF1Q8N6C5 1336 aa29.53■■■□□ 2.32
LSM8-203ENST00000422760 RTL1A6NKG5 1358 aa29.52■■■□□ 2.32
LSM8-203ENST00000422760 FAM161AQ3B820 660 aa29.52■■■□□ 2.32
LSM8-203ENST00000422760 LAS1LQ9Y4W2 734 aaKnown RBP29.52■■■□□ 2.32
LSM8-203ENST00000422760 IFT57Q9NWB7 429 aa29.51■■■□□ 2.32
LSM8-203ENST00000422760 LMTK3Q96Q04 1460 aa29.51■■■□□ 2.31
LSM8-203ENST00000422760 FAM83GA6ND36 823 aa29.51■■■□□ 2.31
LSM8-203ENST00000422760 FOXO3O43524 673 aa29.51■■■□□ 2.31
LSM8-203ENST00000422760 GNAI1P63096 354 aa29.5■■■□□ 2.31
LSM8-203ENST00000422760 SMC4Q9NTJ3 1288 aa29.5■■■□□ 2.31
LSM8-203ENST00000422760 KDM4FA0A1W2PPD8 638 aa29.49■■■□□ 2.31
LSM8-203ENST00000422760 COG6Q9Y2V7 657 aa29.49■■■□□ 2.31
LSM8-203ENST00000422760 DCCP43146 1447 aa29.49■■■□□ 2.31
LSM8-203ENST00000422760 ZNF853P0CG23 659 aa29.49■■■□□ 2.31
LSM8-203ENST00000422760 EYA1Q99502 592 aa29.49■■■□□ 2.31
LSM8-203ENST00000422760 SSH1Q8WYL5 1049 aa29.48■■■□□ 2.31
LSM8-203ENST00000422760 USP35Q9P2H5 1018 aa29.48■■■□□ 2.31
LSM8-203ENST00000422760 TNNQ9UQP3 1299 aa29.48■■■□□ 2.31
LSM8-203ENST00000422760 PHRF1Q9P1Y6 1649 aaKnown RBP29.48■■■□□ 2.31
LSM8-203ENST00000422760 XPCQ01831 940 aaPredicted RBP29.47■■■□□ 2.31
LSM8-203ENST00000422760 RTL5Q5HYW3 569 aaPredicted RBP29.47■■■□□ 2.31
LSM8-203ENST00000422760 MST1RQ04912 1400 aa29.47■■■□□ 2.31
LSM8-203ENST00000422760 RLBP1P12271 317 aa29.47■■■□□ 2.31
LSM8-203ENST00000422760 NCOA3Q9Y6Q9 1424 aa29.47■■■□□ 2.31
LSM8-203ENST00000422760 DCTN1Q14203 1278 aa29.46■■■□□ 2.31
LSM8-203ENST00000422760 NPM2Q86SE8 214 aaKnown RBP29.46■■■□□ 2.31
LSM8-203ENST00000422760 MBIPQ9NS73 344 aa29.46■■■□□ 2.31
LSM8-203ENST00000422760 STRCQ7RTU9 1775 aa29.45■■■□□ 2.31
LSM8-203ENST00000422760 SLIT3O75094 1523 aa29.45■■■□□ 2.31
LSM8-203ENST00000422760 CFAP44Q96MT7 982 aa29.45■■■□□ 2.31
LSM8-203ENST00000422760 ZKSCAN2Q63HK3 967 aa29.45■■■□□ 2.3
LSM8-203ENST00000422760 ATF3P18847 181 aa29.43■■■□□ 2.3
LSM8-203ENST00000422760 KCNH5Q8NCM2 988 aa29.43■■■□□ 2.3
LSM8-203ENST00000422760 CLUAP1Q96AJ1 413 aa29.42■■■□□ 2.3
LSM8-203ENST00000422760 ALDH1L2Q3SY69 923 aa29.41■■■□□ 2.3
LSM8-203ENST00000422760 XIRP1Q702N8 1843 aaKnown RBP29.41■■■□□ 2.3
LSM8-203ENST00000422760 ZNF428Q96B54 188 aa29.4■■■□□ 2.3
LSM8-203ENST00000422760 ALS2Q96Q42 1657 aa29.4■■■□□ 2.3
LSM8-203ENST00000422760 KIF16BQ96L93 1317 aa29.39■■■□□ 2.3
LSM8-203ENST00000422760 MTHFSDQ2M296 383 aaKnown RBP29.39■■■□□ 2.3
LSM8-203ENST00000422760 VIRMAQ69YN4 1812 aaKnown RBP29.39■■■□□ 2.3
LSM8-203ENST00000422760 KRT28Q7Z3Y7 464 aa29.39■■■□□ 2.3
LSM8-203ENST00000422760 IP6K1Q92551 441 aa29.39■■■□□ 2.3
LSM8-203ENST00000422760 LTV1Q96GA3 475 aaPredicted RBP29.39■■■□□ 2.3
LSM8-203ENST00000422760 MCM10Q7L590 875 aa29.38■■■□□ 2.29
LSM8-203ENST00000422760 TRIM27P14373 513 aa29.37■■■□□ 2.29
LSM8-203ENST00000422760 FTSJ3Q8IY81 847 aaKnown RBP29.37■■■□□ 2.29
LSM8-203ENST00000422760 DZIP1LQ8IYY4 767 aaKnown RBP29.37■■■□□ 2.29
LSM8-203ENST00000422760 USP19O94966 1318 aa29.37■■■□□ 2.29
LSM8-203ENST00000422760 TSPYL6Q8N831 410 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms