RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 RICTORQ6R327 1708 aa26.38■■□□□ 1.81
USP48-205ENST00000421625 RPGRIP1LQ68CZ1 1315 aa26.37■■□□□ 1.81
USP48-205ENST00000421625 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
USP48-205ENST00000421625 ABCC3O15438 1527 aa26.37■■□□□ 1.81
USP48-205ENST00000421625 DIP2BQ9P265 1576 aa26.36■■□□□ 1.81
USP48-205ENST00000421625 STK26Q9P289 416 aa26.36■■□□□ 1.81
USP48-205ENST00000421625 CDC45O75419 566 aa26.35■■□□□ 1.81
USP48-205ENST00000421625 MRPL50Q8N5N7 158 aaKnown RBP26.35■■□□□ 1.81
USP48-205ENST00000421625 TSPYL6Q8N831 410 aa26.35■■□□□ 1.81
USP48-205ENST00000421625 THUMPD2Q9BTF0 503 aaKnown RBP26.35■■□□□ 1.81
USP48-205ENST00000421625 IBTKQ9P2D0 1353 aaPredicted RBP26.35■■□□□ 1.81
USP48-205ENST00000421625 GSPT1P15170 499 aaKnown RBP26.35■■□□□ 1.81
USP48-205ENST00000421625 MCTP1Q6DN14 999 aa26.35■■□□□ 1.81
USP48-205ENST00000421625 BRPF1P55201 1214 aaPredicted RBP26.34■■□□□ 1.81
USP48-205ENST00000421625 ANP32BQ92688 251 aaKnown RBP26.34■■□□□ 1.81
USP48-205ENST00000421625 LRRC7Q96NW7 1537 aa26.33■■□□□ 1.81
USP48-205ENST00000421625 VAMP4O75379 141 aa26.33■■□□□ 1.81
USP48-205ENST00000421625 ELL2O00472 640 aaPredicted RBP26.33■■□□□ 1.8
USP48-205ENST00000421625 PRKAR2BP31323 418 aa26.33■■□□□ 1.8
USP48-205ENST00000421625 NCLP19338 710 aaKnown RBP26.32■■□□□ 1.8
USP48-205ENST00000421625 CAVIN1Q6NZI2 390 aaKnown RBP26.32■■□□□ 1.8
USP48-205ENST00000421625 PIK3R4Q99570 1358 aa26.32■■□□□ 1.8
USP48-205ENST00000421625 PTCH1Q13635 1447 aa26.31■■□□□ 1.8
USP48-205ENST00000421625 OFD1O75665 1012 aa26.31■■□□□ 1.8
USP48-205ENST00000421625 PKP1Q13835 747 aa26.31■■□□□ 1.8
USP48-205ENST00000421625 MLECQ14165 292 aa26.31■■□□□ 1.8
USP48-205ENST00000421625 MSNP26038 577 aaKnown RBP26.31■■□□□ 1.8
USP48-205ENST00000421625 ANKRD26Q9UPS8 1709 aa26.3■■□□□ 1.8
USP48-205ENST00000421625 PLEKHG5O94827 1062 aa26.3■■□□□ 1.8
USP48-205ENST00000421625 PNPLA6Q8IY17 1366 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 FBLN1P23142 703 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 ZNF445P59923 1031 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 VGFO15240 615 aaPredicted RBP26.29■■□□□ 1.8
USP48-205ENST00000421625 ZSCAN23Q3MJ62 389 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 ZNF428Q96B54 188 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 CD163L1Q9NR16 1453 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 FCHSD2O94868 740 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 ARHGAP45Q92619 1136 aa26.29■■□□□ 1.8
USP48-205ENST00000421625 MINK1Q8N4C8 1332 aaPredicted RBP26.28■■□□□ 1.8
USP48-205ENST00000421625 FBXO31Q5XUX0 539 aaPredicted RBP26.28■■□□□ 1.8
USP48-205ENST00000421625 CHMP4BQ9H444 224 aaKnown RBP26.28■■□□□ 1.8
USP48-205ENST00000421625 LMBRD1Q9NUN5 540 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 ARHGAP31Q2M1Z3 1444 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 IDI1Q13907 227 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 RABEP1Q15276 862 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 PLEKHM2Q8IWE5 1019 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 PHACTR3Q96KR7 559 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 TERF2IPQ9NYB0 399 aa26.28■■□□□ 1.8
USP48-205ENST00000421625 ABCC4O15439 1325 aa26.27■■□□□ 1.8
USP48-205ENST00000421625 PDCL3Q9H2J4 239 aa26.27■■□□□ 1.8
USP48-205ENST00000421625 CALD1Q05682 793 aaKnown RBP26.27■■□□□ 1.8
USP48-205ENST00000421625 RBSNQ9H1K0 784 aa26.27■■□□□ 1.8
USP48-205ENST00000421625 NEXMIFQ5QGS0 1516 aa26.27■■□□□ 1.8
USP48-205ENST00000421625 ATAD2Q6PL18 1390 aa26.27■■□□□ 1.8
USP48-205ENST00000421625 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.8
USP48-205ENST00000421625 CYP2E1P05181 493 aaPredicted RBP26.26■■□□□ 1.79
USP48-205ENST00000421625 HMOX1P09601 288 aa26.25■■□□□ 1.79
USP48-205ENST00000421625 SIGLEC1Q9BZZ2 1709 aa26.25■■□□□ 1.79
USP48-205ENST00000421625 NUCB2P80303 420 aa26.24■■□□□ 1.79
USP48-205ENST00000421625 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.24■■□□□ 1.79
USP48-205ENST00000421625 C16orf71Q8IYS4 520 aaPredicted RBP26.24■■□□□ 1.79
USP48-205ENST00000421625 USP26Q9BXU7 913 aa26.23■■□□□ 1.79
USP48-205ENST00000421625 REREQ9P2R6 1566 aa26.23■■□□□ 1.79
USP48-205ENST00000421625 RBM10P98175 930 aaKnown RBP26.23■■□□□ 1.79
USP48-205ENST00000421625 MBIPQ9NS73 344 aa26.23■■□□□ 1.79
USP48-205ENST00000421625 RBM27Q9P2N5 1060 aaKnown RBP26.23■■□□□ 1.79
USP48-205ENST00000421625 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
USP48-205ENST00000421625 NFE2L2Q16236 605 aa26.22■■□□□ 1.79
USP48-205ENST00000421625 TTC22Q5TAA0 569 aa26.22■■□□□ 1.79
USP48-205ENST00000421625 KNDC1Q76NI1 1749 aa26.21■■□□□ 1.79
USP48-205ENST00000421625 ZGPATQ8N5A5 531 aaKnown RBP26.21■■□□□ 1.79
USP48-205ENST00000421625 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.21■■□□□ 1.79
USP48-205ENST00000421625 R3HCC1Q9Y3T6 440 aaKnown RBP26.2■■□□□ 1.79
USP48-205ENST00000421625 CDC42BPGQ6DT37 1551 aa26.2■■□□□ 1.79
USP48-205ENST00000421625 OTUD7AQ8TE49 926 aaPredicted RBP26.2■■□□□ 1.78
USP48-205ENST00000421625 CHAMP1Q96JM3 812 aa26.2■■□□□ 1.78
USP48-205ENST00000421625 PRAM1Q96QH2 718 aa26.2■■□□□ 1.78
USP48-205ENST00000421625 PRPF40AO75400 957 aaKnown RBP26.2■■□□□ 1.78
USP48-205ENST00000421625 GPT2Q8TD30 523 aa26.2■■□□□ 1.78
USP48-205ENST00000421625 TWISTNBQ3B726 338 aaPredicted RBP26.19■■□□□ 1.78
USP48-205ENST00000421625 C8orf58Q8NAV2 365 aa26.19■■□□□ 1.78
USP48-205ENST00000421625 PDLIM2Q96JY6 352 aa26.19■■□□□ 1.78
USP48-205ENST00000421625 ZFYVE9O95405 1425 aa26.18■■□□□ 1.78
USP48-205ENST00000421625 GNAI1P63096 354 aa26.18■■□□□ 1.78
USP48-205ENST00000421625 HDGFL2Q7Z4V5 671 aaPredicted RBP26.18■■□□□ 1.78
USP48-205ENST00000421625 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
USP48-205ENST00000421625 NOL7Q9UMY1 257 aaKnown RBP26.18■■□□□ 1.78
USP48-205ENST00000421625 PIK3C2BO00750 1634 aa26.18■■□□□ 1.78
USP48-205ENST00000421625 XPCQ01831 940 aaPredicted RBP26.18■■□□□ 1.78
USP48-205ENST00000421625 IFT57Q9NWB7 429 aa26.18■■□□□ 1.78
USP48-205ENST00000421625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.17■■□□□ 1.78
USP48-205ENST00000421625 DCTPP1Q9H773 170 aa26.17■■□□□ 1.78
USP48-205ENST00000421625 PTPRMP28827 1452 aa26.17■■□□□ 1.78
USP48-205ENST00000421625 HS1BP3Q53T59 392 aa26.17■■□□□ 1.78
USP48-205ENST00000421625 ZDHHC9Q9Y397 364 aa26.17■■□□□ 1.78
USP48-205ENST00000421625 CABP1Q9NZU7 370 aa26.16■■□□□ 1.78
USP48-205ENST00000421625 ZNF853P0CG23 659 aa26.15■■□□□ 1.78
USP48-205ENST00000421625 INTS3Q68E01 1043 aaKnown RBP26.15■■□□□ 1.78
USP48-205ENST00000421625 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
USP48-205ENST00000421625 API5Q9BZZ5 524 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms