RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
SSUH2-205ENST00000420394 PHF8Q9UPP1 1060 aa26.24■■□□□ 1.79
SSUH2-205ENST00000420394 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
SSUH2-205ENST00000420394 PEAK1Q9H792 1746 aa26.22■■□□□ 1.79
SSUH2-205ENST00000420394 GNAI1P63096 354 aa26.22■■□□□ 1.79
SSUH2-205ENST00000420394 IFT57Q9NWB7 429 aa26.22■■□□□ 1.79
SSUH2-205ENST00000420394 EXOSC9Q06265 439 aaKnown RBP26.21■■□□□ 1.79
SSUH2-205ENST00000420394 PHACTR3Q96KR7 559 aa26.21■■□□□ 1.79
SSUH2-205ENST00000420394 TSR2Q969E8 191 aaKnown RBP26.21■■□□□ 1.79
SSUH2-205ENST00000420394 MAP3K19Q56UN5 1328 aa26.2■■□□□ 1.78
SSUH2-205ENST00000420394 ALDH1L2Q3SY69 923 aa26.2■■□□□ 1.78
SSUH2-205ENST00000420394 ZKSCAN2Q63HK3 967 aa26.19■■□□□ 1.78
SSUH2-205ENST00000420394 NLRP6P59044 892 aa26.18■■□□□ 1.78
SSUH2-205ENST00000420394 FRAT1Q92837 279 aaPredicted RBP26.18■■□□□ 1.78
SSUH2-205ENST00000420394 KIF16BQ96L93 1317 aa26.18■■□□□ 1.78
SSUH2-205ENST00000420394 RTL1A6NKG5 1358 aa26.17■■□□□ 1.78
SSUH2-205ENST00000420394 CLUAP1Q96AJ1 413 aa26.17■■□□□ 1.78
SSUH2-205ENST00000420394 HSP90AB2PQ58FF8 381 aa26.16■■□□□ 1.78
SSUH2-205ENST00000420394 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
SSUH2-205ENST00000420394 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
SSUH2-205ENST00000420394 AMPHP49418 695 aa26.15■■□□□ 1.78
SSUH2-205ENST00000420394 BRPF1P55201 1214 aaPredicted RBP26.15■■□□□ 1.78
SSUH2-205ENST00000420394 ZNF853P0CG23 659 aa26.14■■□□□ 1.78
SSUH2-205ENST00000420394 KDRP35968 1356 aa26.14■■□□□ 1.78
SSUH2-205ENST00000420394 IPO8O15397 1037 aaKnown RBP26.14■■□□□ 1.77
SSUH2-205ENST00000420394 ABTB2Q8N961 1025 aa26.14■■□□□ 1.77
SSUH2-205ENST00000420394 CFAP44Q96MT7 982 aa26.14■■□□□ 1.77
SSUH2-205ENST00000420394 PANK1Q8TE04 598 aa26.13■■□□□ 1.77
SSUH2-205ENST00000420394 MARF1Q9Y4F3 1742 aaKnown RBP26.13■■□□□ 1.77
SSUH2-205ENST00000420394 HAP1P54257 671 aaPredicted RBP26.12■■□□□ 1.77
SSUH2-205ENST00000420394 COG6Q9Y2V7 657 aa26.12■■□□□ 1.77
SSUH2-205ENST00000420394 NCOA3Q9Y6Q9 1424 aa26.12■■□□□ 1.77
SSUH2-205ENST00000420394 C14orf37Q86TY3 774 aa26.11■■□□□ 1.77
SSUH2-205ENST00000420394 IGSF1Q8N6C5 1336 aa26.11■■□□□ 1.77
SSUH2-205ENST00000420394 FTSJ3Q8IY81 847 aaKnown RBP26.1■■□□□ 1.77
SSUH2-205ENST00000420394 DZIP1LQ8IYY4 767 aaKnown RBP26.1■■□□□ 1.77
SSUH2-205ENST00000420394 SSH1Q8WYL5 1049 aa26.1■■□□□ 1.77
SSUH2-205ENST00000420394 DLG5Q8TDM6 1919 aa26.1■■□□□ 1.77
SSUH2-205ENST00000420394 MVPQ14764 893 aaKnown RBP26.09■■□□□ 1.77
SSUH2-205ENST00000420394 BCL2L13Q9BXK5 485 aa26.09■■□□□ 1.77
SSUH2-205ENST00000420394 KIF1AQ12756 1690 aa26.08■■□□□ 1.76
SSUH2-205ENST00000420394 PAK3O75914 559 aaPredicted RBP26.07■■□□□ 1.76
SSUH2-205ENST00000420394 ESCO1Q5FWF5 840 aa26.07■■□□□ 1.76
SSUH2-205ENST00000420394 ATF7IPQ6VMQ6 1270 aa26.07■■□□□ 1.76
SSUH2-205ENST00000420394 AEBP1Q8IUX7 1158 aa26.07■■□□□ 1.76
SSUH2-205ENST00000420394 KCNH5Q8NCM2 988 aa26.07■■□□□ 1.76
SSUH2-205ENST00000420394 SOX12O15370 315 aa26.06■■□□□ 1.76
SSUH2-205ENST00000420394 PSME1Q06323 249 aa26.06■■□□□ 1.76
SSUH2-205ENST00000420394 DCCP43146 1447 aa26.06■■□□□ 1.76
SSUH2-205ENST00000420394 HOXC9P31274 260 aa26.06■■□□□ 1.76
SSUH2-205ENST00000420394 PROSER2Q86WR7 435 aaPredicted RBP26.06■■□□□ 1.76
SSUH2-205ENST00000420394 GAS2L2Q8NHY3 880 aa26.05■■□□□ 1.76
SSUH2-205ENST00000420394 DDX19BQ9UMR2 479 aa26.05■■□□□ 1.76
SSUH2-205ENST00000420394 LAS1LQ9Y4W2 734 aaKnown RBP26.05■■□□□ 1.76
SSUH2-205ENST00000420394 ARHGAP45Q92619 1136 aa26.04■■□□□ 1.76
SSUH2-205ENST00000420394 C19orf44Q9H6X5 657 aa26.04■■□□□ 1.76
SSUH2-205ENST00000420394 MBIPQ9NS73 344 aa26.04■■□□□ 1.76
SSUH2-205ENST00000420394 RLBP1P12271 317 aa26.03■■□□□ 1.76
SSUH2-205ENST00000420394 CHMP4BQ9H444 224 aaKnown RBP26.03■■□□□ 1.76
SSUH2-205ENST00000420394 PHRF1Q9P1Y6 1649 aaKnown RBP26.03■■□□□ 1.76
SSUH2-205ENST00000420394 HTATSF1O43719 755 aaKnown RBP26.03■■□□□ 1.76
SSUH2-205ENST00000420394 TRIM27P14373 513 aa26.03■■□□□ 1.76
SSUH2-205ENST00000420394 NFAT5O94916 1531 aa26.02■■□□□ 1.76
SSUH2-205ENST00000420394 VAMP4O75379 141 aa26.02■■□□□ 1.76
SSUH2-205ENST00000420394 EYA1Q99502 592 aa26.01■■□□□ 1.75
SSUH2-205ENST00000420394 THUMPD2Q9BTF0 503 aaKnown RBP26.01■■□□□ 1.75
SSUH2-205ENST00000420394 MST1RQ04912 1400 aa26■■□□□ 1.75
SSUH2-205ENST00000420394 NOB1Q9ULX3 412 aaKnown RBP26■■□□□ 1.75
SSUH2-205ENST00000420394 KIAA0232Q92628 1395 aa26■■□□□ 1.75
SSUH2-205ENST00000420394 C1orf167Q5SNV9 1468 aa25.98■■□□□ 1.75
SSUH2-205ENST00000420394 TWISTNBQ3B726 338 aaPredicted RBP25.98■■□□□ 1.75
SSUH2-205ENST00000420394 RTF1Q92541 710 aaKnown RBP25.98■■□□□ 1.75
SSUH2-205ENST00000420394 IP6K1Q92551 441 aa25.98■■□□□ 1.75
SSUH2-205ENST00000420394 RWDD1Q9H446 243 aaPredicted RBP25.98■■□□□ 1.75
SSUH2-205ENST00000420394 SLIT3O75094 1523 aa25.98■■□□□ 1.75
SSUH2-205ENST00000420394 CHL1O00533 1208 aa25.97■■□□□ 1.75
SSUH2-205ENST00000420394 PDE4AP27815 886 aa25.97■■□□□ 1.75
SSUH2-205ENST00000420394 RBM33Q96EV2 1170 aaKnown RBP25.97■■□□□ 1.75
SSUH2-205ENST00000420394 BACH2Q9BYV9 841 aa25.97■■□□□ 1.75
SSUH2-205ENST00000420394 NUTM2GQ5VZR2 741 aa25.96■■□□□ 1.75
SSUH2-205ENST00000420394 FAM83GA6ND36 823 aa25.96■■□□□ 1.75
SSUH2-205ENST00000420394 LTN1O94822 1766 aa25.95■■□□□ 1.75
SSUH2-205ENST00000420394 MRPL50Q8N5N7 158 aaKnown RBP25.95■■□□□ 1.74
SSUH2-205ENST00000420394 CRB1P82279 1406 aa25.94■■□□□ 1.74
SSUH2-205ENST00000420394 TNNQ9UQP3 1299 aa25.94■■□□□ 1.74
SSUH2-205ENST00000420394 ANP32AP39687 249 aaKnown RBP25.93■■□□□ 1.74
SSUH2-205ENST00000420394 MTHFSDQ2M296 383 aaKnown RBP25.93■■□□□ 1.74
SSUH2-205ENST00000420394 IGHDP01880 384 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 ITPRIPQ8IWB1 547 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 ORAI2Q96SN7 254 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 TRPM3Q9HCF6 1732 aaPredicted RBP25.92■■□□□ 1.74
SSUH2-205ENST00000420394 USP19O94966 1318 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 ATF3P18847 181 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 DCTN1Q14203 1278 aa25.92■■□□□ 1.74
SSUH2-205ENST00000420394 API5Q9BZZ5 524 aaKnown RBP25.92■■□□□ 1.74
SSUH2-205ENST00000420394 TMEM94Q12767 1356 aa25.91■■□□□ 1.74
SSUH2-205ENST00000420394 BABAM1Q9NWV8 329 aa25.91■■□□□ 1.74
SSUH2-205ENST00000420394 TSPYL6Q8N831 410 aa25.9■■□□□ 1.74
SSUH2-205ENST00000420394 PCDHB15Q9Y5E8 787 aa25.9■■□□□ 1.74
SSUH2-205ENST00000420394 FOXO3O43524 673 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms