RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PRKAR2BP31323 418 aa27.51■■□□□ 1.99
GPC1-202ENST00000420138 WDR63Q8IWG1 891 aa27.51■■□□□ 1.99
GPC1-202ENST00000420138 MAPK8IP3Q9UPT6 1336 aa27.5■■□□□ 1.99
GPC1-202ENST00000420138 FLT4P35916 1363 aa27.49■■□□□ 1.99
GPC1-202ENST00000420138 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
GPC1-202ENST00000420138 TRIM35Q9UPQ4 493 aa27.48■■□□□ 1.99
GPC1-202ENST00000420138 ERICH6BQ5W0A0 696 aa27.48■■□□□ 1.99
GPC1-202ENST00000420138 PHACTR3Q96KR7 559 aa27.48■■□□□ 1.99
GPC1-202ENST00000420138 SLAIN2Q9P270 581 aa27.48■■□□□ 1.99
GPC1-202ENST00000420138 RRP1P56182 461 aaKnown RBP27.46■■□□□ 1.99
GPC1-202ENST00000420138 KRT28Q7Z3Y7 464 aa27.46■■□□□ 1.99
GPC1-202ENST00000420138 KIF24Q5T7B8 1368 aa27.45■■□□□ 1.99
GPC1-202ENST00000420138 RGPD1P0DJD0 1748 aa27.45■■□□□ 1.98
GPC1-202ENST00000420138 NFAT5O94916 1531 aa27.44■■□□□ 1.98
GPC1-202ENST00000420138 NPHP3Q7Z494 1330 aa27.43■■□□□ 1.98
GPC1-202ENST00000420138 BRINP3Q76B58 766 aa27.43■■□□□ 1.98
GPC1-202ENST00000420138 AMPHP49418 695 aa27.42■■□□□ 1.98
GPC1-202ENST00000420138 RIPK4P57078 832 aa27.42■■□□□ 1.98
GPC1-202ENST00000420138 ALS2Q96Q42 1657 aa27.42■■□□□ 1.98
GPC1-202ENST00000420138 HOXC9P31274 260 aa27.41■■□□□ 1.98
GPC1-202ENST00000420138 AEBP1Q8IUX7 1158 aa27.41■■□□□ 1.98
GPC1-202ENST00000420138 DDX17Q92841 729 aaKnown RBP27.41■■□□□ 1.98
GPC1-202ENST00000420138 NFE2L2Q16236 605 aa27.39■■□□□ 1.98
GPC1-202ENST00000420138 SULT6B1Q6IMI4 303 aa27.39■■□□□ 1.98
GPC1-202ENST00000420138 SLIT3O75094 1523 aa27.39■■□□□ 1.97
GPC1-202ENST00000420138 USP19O94966 1318 aa27.38■■□□□ 1.97
GPC1-202ENST00000420138 ARHGEF10O15013 1369 aa27.38■■□□□ 1.97
GPC1-202ENST00000420138 PXDNQ92626 1479 aa27.37■■□□□ 1.97
GPC1-202ENST00000420138 LMOD2Q6P5Q4 547 aa27.37■■□□□ 1.97
GPC1-202ENST00000420138 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
GPC1-202ENST00000420138 RTL1A6NKG5 1358 aa27.37■■□□□ 1.97
GPC1-202ENST00000420138 LTN1O94822 1766 aa27.36■■□□□ 1.97
GPC1-202ENST00000420138 NEFMP07197 916 aa27.36■■□□□ 1.97
GPC1-202ENST00000420138 IL16Q14005 1332 aa27.35■■□□□ 1.97
GPC1-202ENST00000420138 IGSF1Q8N6C5 1336 aa27.35■■□□□ 1.97
GPC1-202ENST00000420138 NHSL1Q5SYE7 1610 aa27.35■■□□□ 1.97
GPC1-202ENST00000420138 KDRP35968 1356 aa27.34■■□□□ 1.97
GPC1-202ENST00000420138 GCP02774 474 aa27.34■■□□□ 1.97
GPC1-202ENST00000420138 EYA1Q99502 592 aa27.34■■□□□ 1.97
GPC1-202ENST00000420138 IP6K1Q92551 441 aa27.33■■□□□ 1.97
GPC1-202ENST00000420138 MYH16Q9H6N6 1097 aa27.32■■□□□ 1.96
GPC1-202ENST00000420138 PPP4R2Q9NY27 417 aa27.32■■□□□ 1.96
GPC1-202ENST00000420138 ROBO1Q9Y6N7 1651 aa27.31■■□□□ 1.96
GPC1-202ENST00000420138 TNS3Q68CZ2 1445 aa27.31■■□□□ 1.96
GPC1-202ENST00000420138 PLIN1O60240 522 aa27.31■■□□□ 1.96
GPC1-202ENST00000420138 PHRF1Q9P1Y6 1649 aaKnown RBP27.31■■□□□ 1.96
GPC1-202ENST00000420138 ARHGEF25Q86VW2 580 aa27.3■■□□□ 1.96
GPC1-202ENST00000420138 MED1Q15648 1581 aaPredicted RBP27.29■■□□□ 1.96
GPC1-202ENST00000420138 FANCIQ9NVI1 1328 aa27.29■■□□□ 1.96
GPC1-202ENST00000420138 TSR2Q969E8 191 aaKnown RBP27.27■■□□□ 1.96
GPC1-202ENST00000420138 PLEKHG5O94827 1062 aa27.27■■□□□ 1.96
GPC1-202ENST00000420138 SOS2Q07890 1332 aaPredicted RBP27.27■■□□□ 1.96
GPC1-202ENST00000420138 SPATA31A3Q5VYP0 1347 aa27.27■■□□□ 1.96
GPC1-202ENST00000420138 THUMPD2Q9BTF0 503 aaKnown RBP27.25■■□□□ 1.95
GPC1-202ENST00000420138 BCAR3O75815 825 aa27.25■■□□□ 1.95
GPC1-202ENST00000420138 CRYBG1Q9Y4K1 1723 aa27.24■■□□□ 1.95
GPC1-202ENST00000420138 LTV1Q96GA3 475 aaPredicted RBP27.23■■□□□ 1.95
GPC1-202ENST00000420138 C20orf194Q5TEA3 1177 aa27.22■■□□□ 1.95
GPC1-202ENST00000420138 FAM83GA6ND36 823 aa27.21■■□□□ 1.95
GPC1-202ENST00000420138 RARSP54136 660 aaKnown RBP27.21■■□□□ 1.95
GPC1-202ENST00000420138 LMOD3Q0VAK6 560 aa27.21■■□□□ 1.95
GPC1-202ENST00000420138 EXOC6Q8TAG9 804 aa27.21■■□□□ 1.95
GPC1-202ENST00000420138 ZNF853P0CG23 659 aa27.2■■□□□ 1.95
GPC1-202ENST00000420138 DLG5Q8TDM6 1919 aa27.2■■□□□ 1.94
GPC1-202ENST00000420138 EXOSC9Q06265 439 aaKnown RBP27.19■■□□□ 1.94
GPC1-202ENST00000420138 MTHFSDQ2M296 383 aaKnown RBP27.19■■□□□ 1.94
GPC1-202ENST00000420138 ZBTB7CA1YPR0 619 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 AHDC1Q5TGY3 1603 aaPredicted RBP27.18■■□□□ 1.94
GPC1-202ENST00000420138 TOM1O60784 492 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 CALD1Q05682 793 aaKnown RBP27.18■■□□□ 1.94
GPC1-202ENST00000420138 DCTN1Q14203 1278 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 NBPF6Q5VWK0 638 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 B4GALNT3Q6L9W6 998 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 NBPF4Q96M43 638 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 AXIN2Q9Y2T1 843 aa27.18■■□□□ 1.94
GPC1-202ENST00000420138 CT47B1P0C2W7 299 aaPredicted RBP27.17■■□□□ 1.94
GPC1-202ENST00000420138 TSHZ2Q9NRE2 1034 aa27.17■■□□□ 1.94
GPC1-202ENST00000420138 IFT57Q9NWB7 429 aa27.17■■□□□ 1.94
GPC1-202ENST00000420138 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.16■■□□□ 1.94
GPC1-202ENST00000420138 ZC3H6P61129 1189 aaKnown RBP27.15■■□□□ 1.94
GPC1-202ENST00000420138 USHBP1Q8N6Y0 703 aa27.15■■□□□ 1.94
GPC1-202ENST00000420138 CRBNQ96SW2 442 aa27.15■■□□□ 1.94
GPC1-202ENST00000420138 ABCA3Q99758 1704 aa27.15■■□□□ 1.94
GPC1-202ENST00000420138 CABLES1Q8TDN4 633 aa27.14■■□□□ 1.94
GPC1-202ENST00000420138 NCAPD2Q15021 1401 aa27.14■■□□□ 1.94
GPC1-202ENST00000420138 RGPD5Q99666 1765 aa27.13■■□□□ 1.93
GPC1-202ENST00000420138 PHLPP1O60346 1717 aa27.13■■□□□ 1.93
GPC1-202ENST00000420138 GNAI1P63096 354 aa27.13■■□□□ 1.93
GPC1-202ENST00000420138 CFAP44Q96MT7 982 aa27.13■■□□□ 1.93
GPC1-202ENST00000420138 LRRC59Q96AG4 307 aaKnown RBP27.12■■□□□ 1.93
GPC1-202ENST00000420138 MCM10Q7L590 875 aa27.11■■□□□ 1.93
GPC1-202ENST00000420138 ANKRD24Q8TF21 1146 aa27.11■■□□□ 1.93
GPC1-202ENST00000420138 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
GPC1-202ENST00000420138 LAS1LQ9Y4W2 734 aaKnown RBP27.11■■□□□ 1.93
GPC1-202ENST00000420138 GAS2L2Q8NHY3 880 aa27.11■■□□□ 1.93
GPC1-202ENST00000420138 UBAP1LF5GYI3 381 aa27.1■■□□□ 1.93
GPC1-202ENST00000420138 PIP4K2BP78356 416 aa27.1■■□□□ 1.93
GPC1-202ENST00000420138 CRB1P82279 1406 aa27.09■■□□□ 1.93
GPC1-202ENST00000420138 BCL2L13Q9BXK5 485 aa27.08■■□□□ 1.93
GPC1-202ENST00000420138 RGPD2P0DJD1 1756 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms