RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ARXQ96QS3 562 aa14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 MRPL50Q8N5N7 158 aaKnown RBP14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 CFAP44Q96MT7 982 aa14.63□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 FAM135BQ49AJ0 1406 aa14.62□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 L1TD1Q5T7N2 865 aaKnown RBP14.62□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 NUTM2FA1L443 756 aa14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 SOX12O15370 315 aa14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ZBTB7BO15156 539 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 EIF5BO60841 1220 aaKnown RBP14.6□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 BMP2KLQ5H9B9 411 aa14.6□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 NCKAP5LQ9HCH0 1330 aa14.6□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 DCTN1Q14203 1278 aa14.59□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 SULT6B1Q6IMI4 303 aa14.59□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 VIRMAQ69YN4 1812 aaKnown RBP14.59□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 FAM83GA6ND36 823 aa14.59□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.07
CSPG4P3Y-201ENST00000418188 C8orf58Q8NAV2 365 aa14.58□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 MCM4P33991 863 aa14.58□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 METP08581 1390 aa14.58□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 DLC1Q96QB1 1528 aa14.57□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 RTF1Q92541 710 aaKnown RBP14.56□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 CDK12Q9NYV4 1490 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 GOLGA6L3A6NEY3 463 aa14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 ZNF853P0CG23 659 aa14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 CPSF1Q10570 1443 aaKnown RBP14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 RBM25P49756 843 aaKnown RBP14.55□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 KIF20BQ96Q89 1820 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 ABCC4O15439 1325 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 CDC45O75419 566 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 CASC1Q6TDU7 716 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 SIRT1Q96EB6 747 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 GBP4Q96PP9 640 aa14.54□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 APBB1O00213 710 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 AEBP1Q8IUX7 1158 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 AGLP35573 1532 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 TRAK2O60296 914 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 EIF4A2Q14240 407 aaKnown RBP14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 TBC1D9Q6ZT07 1266 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 PTCH1Q13635 1447 aa14.53□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 MCM10Q7L590 875 aa14.52□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
CSPG4P3Y-201ENST00000418188 EID1Q9Y6B2 187 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 ACEP12821 1306 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 TNRQ92752 1358 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SNX21Q969T3 373 aa14.52□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SPATA31D1Q6ZQQ2 1576 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SLC4A10Q6U841 1118 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 PIK3R4Q99570 1358 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 HMMRO75330 724 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 MAP2P11137 1827 aaKnown RBP14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 AMPHP49418 695 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SIRT2Q8IXJ6 389 aa14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 RPAP2Q8IXW5 612 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SLC4A2P04920 1241 aa14.49□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 PRR36Q9H6K5 1346 aa14.49□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 KRT24Q2M2I5 525 aa14.49□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 K7ELQ4 463 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 STK31Q9BXU1 1019 aa14.48□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 DCTPP1Q9H773 170 aa14.48□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 INTS3Q68E01 1043 aaKnown RBP14.48□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 TMEM2Q9UHN6 1383 aa14.47□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 CHL1O00533 1208 aa14.47□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 PTMSP20962 102 aa14.47□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 PTPRCP08575 1304 aa14.47□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 CPS1P31327 1500 aa14.46□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 DIP2BQ9P265 1576 aa14.46□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
CSPG4P3Y-201ENST00000418188 ROBO2Q9HCK4 1378 aa14.46□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 PLEKHM2Q8IWE5 1019 aa14.45□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 MIS18AQ9NYP9 233 aa14.45□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 RABEP1Q15276 862 aa14.44□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 SKOR2Q2VWA4 1001 aaPredicted RBP14.44□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 GAS2L2Q8NHY3 880 aa14.44□□□□□ -0.1
CSPG4P3Y-201ENST00000418188 TECPR2O15040 1411 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms