RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 TULP1O00294 542 aaPredicted RBP25.79■■□□□ 1.72
AP1S3-205ENST00000415298 LETM1O95202 739 aaPredicted RBP25.79■■□□□ 1.72
AP1S3-205ENST00000415298 ATF3P18847 181 aa25.79■■□□□ 1.72
AP1S3-205ENST00000415298 ESCO1Q5FWF5 840 aa25.79■■□□□ 1.72
AP1S3-205ENST00000415298 NUDCQ9Y266 331 aa25.79■■□□□ 1.72
AP1S3-205ENST00000415298 IRX3P78415 501 aaPredicted RBP25.78■■□□□ 1.72
AP1S3-205ENST00000415298 AMER1Q5JTC6 1135 aaPredicted RBP25.78■■□□□ 1.72
AP1S3-205ENST00000415298 PRKRIP1Q9H875 184 aaPredicted RBP25.78■■□□□ 1.72
AP1S3-205ENST00000415298 NINLQ9Y2I6 1382 aa25.78■■□□□ 1.72
AP1S3-205ENST00000415298 CDK11BP21127 795 aaKnown RBP25.77■■□□□ 1.72
AP1S3-205ENST00000415298 PLEKHG3A1L390 1219 aa25.77■■□□□ 1.72
AP1S3-205ENST00000415298 HDGFL2Q7Z4V5 671 aaPredicted RBP25.77■■□□□ 1.72
AP1S3-205ENST00000415298 MYH16Q9H6N6 1097 aa25.77■■□□□ 1.72
AP1S3-205ENST00000415298 MSH6P52701 1360 aa25.77■■□□□ 1.72
AP1S3-205ENST00000415298 NCOA3Q9Y6Q9 1424 aa25.77■■□□□ 1.72
AP1S3-205ENST00000415298 MRE11P49959 708 aa25.76■■□□□ 1.71
AP1S3-205ENST00000415298 TOPAZ1Q8N9V7 1692 aa25.75■■□□□ 1.71
AP1S3-205ENST00000415298 CPSF1Q10570 1443 aaKnown RBP25.75■■□□□ 1.71
AP1S3-205ENST00000415298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
AP1S3-205ENST00000415298 LTBP4Q8N2S1 1624 aa25.74■■□□□ 1.71
AP1S3-205ENST00000415298 ANKARQ7Z5J8 1434 aa25.74■■□□□ 1.71
AP1S3-205ENST00000415298 OFD1O75665 1012 aa25.74■■□□□ 1.71
AP1S3-205ENST00000415298 KTN1Q86UP2 1357 aaKnown RBP25.74■■□□□ 1.71
AP1S3-205ENST00000415298 NGDNQ8NEJ9 315 aaKnown RBP25.74■■□□□ 1.71
AP1S3-205ENST00000415298 CADPS2Q86UW7 1296 aa25.73■■□□□ 1.71
AP1S3-205ENST00000415298 TRIM44Q96DX7 344 aaPredicted RBP25.73■■□□□ 1.71
AP1S3-205ENST00000415298 FAM9BQ8IZU0 186 aa25.72■■□□□ 1.71
AP1S3-205ENST00000415298 PHF8Q9UPP1 1060 aa25.72■■□□□ 1.71
AP1S3-205ENST00000415298 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.71■■□□□ 1.71
AP1S3-205ENST00000415298 C1orf167Q5SNV9 1468 aa25.71■■□□□ 1.71
AP1S3-205ENST00000415298 MST1RQ04912 1400 aa25.71■■□□□ 1.71
AP1S3-205ENST00000415298 DNTTIP2Q5QJE6 756 aaKnown RBP25.71■■□□□ 1.71
AP1S3-205ENST00000415298 CNKSR2Q8WXI2 1034 aa25.71■■□□□ 1.71
AP1S3-205ENST00000415298 FOXO3O43524 673 aa25.7■■□□□ 1.7
AP1S3-205ENST00000415298 CCDC94Q9BW85 323 aaPredicted RBP25.69■■□□□ 1.7
AP1S3-205ENST00000415298 GGNBP2Q9H3C7 697 aa25.69■■□□□ 1.7
AP1S3-205ENST00000415298 CCDC184Q52MB2 194 aa25.68■■□□□ 1.7
AP1S3-205ENST00000415298 DDX17Q92841 729 aaKnown RBP25.68■■□□□ 1.7
AP1S3-205ENST00000415298 ZNF692Q9BU19 519 aaPredicted RBP25.68■■□□□ 1.7
AP1S3-205ENST00000415298 ITSN1Q15811 1721 aa25.68■■□□□ 1.7
AP1S3-205ENST00000415298 FYB1O15117 783 aa25.68■■□□□ 1.7
AP1S3-205ENST00000415298 XPCQ01831 940 aaPredicted RBP25.68■■□□□ 1.7
AP1S3-205ENST00000415298 DCCP43146 1447 aa25.68■■□□□ 1.7
AP1S3-205ENST00000415298 ZRANB1Q9UGI0 708 aa25.67■■□□□ 1.7
AP1S3-205ENST00000415298 POLR3AO14802 1390 aaPredicted RBP25.67■■□□□ 1.7
AP1S3-205ENST00000415298 CGNL1Q0VF96 1302 aa25.66■■□□□ 1.7
AP1S3-205ENST00000415298 AKAP12Q02952 1782 aa25.66■■□□□ 1.7
AP1S3-205ENST00000415298 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
AP1S3-205ENST00000415298 NME9Q86XW9 330 aa25.65■■□□□ 1.7
AP1S3-205ENST00000415298 USP6P35125 1406 aa25.64■■□□□ 1.7
AP1S3-205ENST00000415298 PARD3Q8TEW0 1356 aa25.63■■□□□ 1.69
AP1S3-205ENST00000415298 MON2Q7Z3U7 1717 aa25.62■■□□□ 1.69
AP1S3-205ENST00000415298 TTC21BQ7Z4L5 1316 aa25.62■■□□□ 1.69
AP1S3-205ENST00000415298 EDC4Q6P2E9 1401 aaKnown RBP25.62■■□□□ 1.69
AP1S3-205ENST00000415298 PSME1Q06323 249 aa25.62■■□□□ 1.69
AP1S3-205ENST00000415298 FBLN1P23142 703 aa25.61■■□□□ 1.69
AP1S3-205ENST00000415298 RALBP1Q15311 655 aa25.61■■□□□ 1.69
AP1S3-205ENST00000415298 BRINP3Q76B58 766 aa25.6■■□□□ 1.69
AP1S3-205ENST00000415298 CNPY4Q8N129 248 aa25.6■■□□□ 1.69
AP1S3-205ENST00000415298 HSP90B1P14625 803 aaKnown RBP25.6■■□□□ 1.69
AP1S3-205ENST00000415298 NPC1L1Q9UHC9 1359 aa25.59■■□□□ 1.69
AP1S3-205ENST00000415298 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
AP1S3-205ENST00000415298 ISY1Q9ULR0 285 aaKnown RBP25.59■■□□□ 1.69
AP1S3-205ENST00000415298 SSH2Q76I76 1423 aa25.59■■□□□ 1.69
AP1S3-205ENST00000415298 DYNC1I1O14576 645 aa25.59■■□□□ 1.69
AP1S3-205ENST00000415298 ARID3AQ99856 593 aa25.59■■□□□ 1.69
AP1S3-205ENST00000415298 MRS2Q9HD23 443 aa25.58■■□□□ 1.69
AP1S3-205ENST00000415298 MMP14P50281 582 aa25.58■■□□□ 1.68
AP1S3-205ENST00000415298 NUTM2GQ5VZR2 741 aa25.58■■□□□ 1.68
AP1S3-205ENST00000415298 GRPEL1Q9HAV7 217 aa25.57■■□□□ 1.68
AP1S3-205ENST00000415298 KCNG1Q9UIX4 513 aa25.57■■□□□ 1.68
AP1S3-205ENST00000415298 SLC20A2Q08357 652 aa25.56■■□□□ 1.68
AP1S3-205ENST00000415298 EXOC6Q8TAG9 804 aa25.56■■□□□ 1.68
AP1S3-205ENST00000415298 NRKQ7Z2Y5 1582 aa25.55■■□□□ 1.68
AP1S3-205ENST00000415298 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
AP1S3-205ENST00000415298 MYBBP1AQ9BQG0 1328 aaKnown RBP25.54■■□□□ 1.68
AP1S3-205ENST00000415298 PPP2R1AP30153 589 aa25.54■■□□□ 1.68
AP1S3-205ENST00000415298 UQCRHLA0A096LP55 91 aa25.53■■□□□ 1.68
AP1S3-205ENST00000415298 UQCRHP07919 91 aa25.53■■□□□ 1.68
AP1S3-205ENST00000415298 KIF20BQ96Q89 1820 aa25.52■■□□□ 1.68
AP1S3-205ENST00000415298 ZBTB22O15209 634 aa25.52■■□□□ 1.68
AP1S3-205ENST00000415298 ABTB2Q8N961 1025 aa25.52■■□□□ 1.68
AP1S3-205ENST00000415298 CLGNO14967 610 aa25.51■■□□□ 1.67
AP1S3-205ENST00000415298 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.51■■□□□ 1.67
AP1S3-205ENST00000415298 R3HCC1Q9Y3T6 440 aaKnown RBP25.51■■□□□ 1.67
AP1S3-205ENST00000415298 LMOD2Q6P5Q4 547 aa25.5■■□□□ 1.67
AP1S3-205ENST00000415298 NSD2O96028 1365 aa25.5■■□□□ 1.67
AP1S3-205ENST00000415298 E9PSI1 815 aa25.5■■□□□ 1.67
AP1S3-205ENST00000415298 SOX12O15370 315 aa25.5■■□□□ 1.67
AP1S3-205ENST00000415298 ZSCAN30Q86W11 494 aa25.5■■□□□ 1.67
AP1S3-205ENST00000415298 NLRP6P59044 892 aa25.49■■□□□ 1.67
AP1S3-205ENST00000415298 COG3Q96JB2 828 aa25.49■■□□□ 1.67
AP1S3-205ENST00000415298 TTC21AQ8NDW8 1320 aa25.48■■□□□ 1.67
AP1S3-205ENST00000415298 KIF1AQ12756 1690 aa25.48■■□□□ 1.67
AP1S3-205ENST00000415298 FAM161AQ3B820 660 aa25.47■■□□□ 1.67
AP1S3-205ENST00000415298 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
AP1S3-205ENST00000415298 NPHP3Q7Z494 1330 aa25.47■■□□□ 1.67
AP1S3-205ENST00000415298 RRP1P56182 461 aaKnown RBP25.46■■□□□ 1.67
AP1S3-205ENST00000415298 PIP4K2BP78356 416 aa25.46■■□□□ 1.67
AP1S3-205ENST00000415298 DNAJC2Q99543 621 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms