RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 MARF1Q9Y4F3 1742 aaKnown RBP24.85■■□□□ 1.57
PPM1N-206ENST00000415077 CADPS2Q86UW7 1296 aa24.84■■□□□ 1.57
PPM1N-206ENST00000415077 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
PPM1N-206ENST00000415077 XPCQ01831 940 aaPredicted RBP24.83■■□□□ 1.57
PPM1N-206ENST00000415077 MST1RQ04912 1400 aa24.82■■□□□ 1.56
PPM1N-206ENST00000415077 MSH6P52701 1360 aa24.81■■□□□ 1.56
PPM1N-206ENST00000415077 KIF1AQ12756 1690 aa24.81■■□□□ 1.56
PPM1N-206ENST00000415077 SULT6B1Q6IMI4 303 aa24.8■■□□□ 1.56
PPM1N-206ENST00000415077 KRT28Q7Z3Y7 464 aa24.8■■□□□ 1.56
PPM1N-206ENST00000415077 MYH16Q9H6N6 1097 aa24.8■■□□□ 1.56
PPM1N-206ENST00000415077 KIF24Q5T7B8 1368 aa24.8■■□□□ 1.56
PPM1N-206ENST00000415077 NFE2L2Q16236 605 aa24.8■■□□□ 1.56
PPM1N-206ENST00000415077 PELP1Q8IZL8 1130 aaKnown RBP24.79■■□□□ 1.56
PPM1N-206ENST00000415077 PLIN1O60240 522 aa24.78■■□□□ 1.56
PPM1N-206ENST00000415077 ZNF335Q9H4Z2 1342 aaPredicted RBP24.77■■□□□ 1.56
PPM1N-206ENST00000415077 HOXC9P31274 260 aa24.77■■□□□ 1.56
PPM1N-206ENST00000415077 AEBP1Q8IUX7 1158 aa24.77■■□□□ 1.56
PPM1N-206ENST00000415077 KCNH5Q8NCM2 988 aa24.77■■□□□ 1.56
PPM1N-206ENST00000415077 LMOD2Q6P5Q4 547 aa24.76■■□□□ 1.55
PPM1N-206ENST00000415077 IL16Q14005 1332 aa24.76■■□□□ 1.55
PPM1N-206ENST00000415077 RGPD1P0DJD0 1748 aa24.74■■□□□ 1.55
PPM1N-206ENST00000415077 ARHGEF10O15013 1369 aa24.73■■□□□ 1.55
PPM1N-206ENST00000415077 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.73■■□□□ 1.55
PPM1N-206ENST00000415077 XIRP1Q702N8 1843 aaKnown RBP24.73■■□□□ 1.55
PPM1N-206ENST00000415077 TRPM3Q9HCF6 1732 aaPredicted RBP24.72■■□□□ 1.55
PPM1N-206ENST00000415077 RTL1A6NKG5 1358 aa24.72■■□□□ 1.55
PPM1N-206ENST00000415077 NFAT5O94916 1531 aa24.71■■□□□ 1.55
PPM1N-206ENST00000415077 B4GALNT3Q6L9W6 998 aa24.71■■□□□ 1.55
PPM1N-206ENST00000415077 GCP02774 474 aa24.71■■□□□ 1.55
PPM1N-206ENST00000415077 EYA1Q99502 592 aa24.71■■□□□ 1.55
PPM1N-206ENST00000415077 FANCIQ9NVI1 1328 aa24.71■■□□□ 1.55
PPM1N-206ENST00000415077 BCAR3O75815 825 aa24.7■■□□□ 1.54
PPM1N-206ENST00000415077 LMOD3Q0VAK6 560 aa24.7■■□□□ 1.54
PPM1N-206ENST00000415077 TSR2Q969E8 191 aaKnown RBP24.7■■□□□ 1.54
PPM1N-206ENST00000415077 LTN1O94822 1766 aa24.69■■□□□ 1.54
PPM1N-206ENST00000415077 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
PPM1N-206ENST00000415077 EXOC6Q8TAG9 804 aa24.69■■□□□ 1.54
PPM1N-206ENST00000415077 IP6K1Q92551 441 aa24.69■■□□□ 1.54
PPM1N-206ENST00000415077 IGSF1Q8N6C5 1336 aa24.69■■□□□ 1.54
PPM1N-206ENST00000415077 CALD1Q05682 793 aaKnown RBP24.69■■□□□ 1.54
PPM1N-206ENST00000415077 DDX17Q92841 729 aaKnown RBP24.69■■□□□ 1.54
PPM1N-206ENST00000415077 PLEKHG5O94827 1062 aa24.68■■□□□ 1.54
PPM1N-206ENST00000415077 KDRP35968 1356 aa24.67■■□□□ 1.54
PPM1N-206ENST00000415077 LTV1Q96GA3 475 aaPredicted RBP24.67■■□□□ 1.54
PPM1N-206ENST00000415077 USP19O94966 1318 aa24.66■■□□□ 1.54
PPM1N-206ENST00000415077 ZBTB7CA1YPR0 619 aa24.66■■□□□ 1.54
PPM1N-206ENST00000415077 SLIT3O75094 1523 aa24.66■■□□□ 1.54
PPM1N-206ENST00000415077 CCDC136Q96JN2 1154 aa24.65■■□□□ 1.54
PPM1N-206ENST00000415077 THUMPD2Q9BTF0 503 aaKnown RBP24.65■■□□□ 1.54
PPM1N-206ENST00000415077 DLG5Q8TDM6 1919 aa24.65■■□□□ 1.54
PPM1N-206ENST00000415077 RARSP54136 660 aaKnown RBP24.65■■□□□ 1.54
PPM1N-206ENST00000415077 C20orf194Q5TEA3 1177 aa24.65■■□□□ 1.54
PPM1N-206ENST00000415077 CT47B1P0C2W7 299 aaPredicted RBP24.64■■□□□ 1.54
PPM1N-206ENST00000415077 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
PPM1N-206ENST00000415077 ARHGEF25Q86VW2 580 aa24.63■■□□□ 1.53
PPM1N-206ENST00000415077 LAS1LQ9Y4W2 734 aaKnown RBP24.63■■□□□ 1.53
PPM1N-206ENST00000415077 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
PPM1N-206ENST00000415077 SLAIN2Q9P270 581 aa24.63■■□□□ 1.53
PPM1N-206ENST00000415077 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
PPM1N-206ENST00000415077 CRBNQ96SW2 442 aa24.62■■□□□ 1.53
PPM1N-206ENST00000415077 FAM83GA6ND36 823 aa24.62■■□□□ 1.53
PPM1N-206ENST00000415077 IFT57Q9NWB7 429 aa24.61■■□□□ 1.53
PPM1N-206ENST00000415077 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
PPM1N-206ENST00000415077 GNAI1P63096 354 aa24.6■■□□□ 1.53
PPM1N-206ENST00000415077 DCTN1Q14203 1278 aa24.59■■□□□ 1.53
PPM1N-206ENST00000415077 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
PPM1N-206ENST00000415077 MTHFSDQ2M296 383 aaKnown RBP24.58■■□□□ 1.53
PPM1N-206ENST00000415077 PXDNQ92626 1479 aa24.58■■□□□ 1.53
PPM1N-206ENST00000415077 TNS3Q68CZ2 1445 aa24.57■■□□□ 1.52
PPM1N-206ENST00000415077 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
PPM1N-206ENST00000415077 CFAP44Q96MT7 982 aa24.57■■□□□ 1.52
PPM1N-206ENST00000415077 FRAT1Q92837 279 aaPredicted RBP24.56■■□□□ 1.52
PPM1N-206ENST00000415077 BCL2L13Q9BXK5 485 aa24.56■■□□□ 1.52
PPM1N-206ENST00000415077 GAS2L2Q8NHY3 880 aa24.56■■□□□ 1.52
PPM1N-206ENST00000415077 SPATA31A3Q5VYP0 1347 aa24.56■■□□□ 1.52
PPM1N-206ENST00000415077 MED1Q15648 1581 aaPredicted RBP24.55■■□□□ 1.52
PPM1N-206ENST00000415077 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
PPM1N-206ENST00000415077 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
PPM1N-206ENST00000415077 ZC3H6P61129 1189 aaKnown RBP24.54■■□□□ 1.52
PPM1N-206ENST00000415077 MCM10Q7L590 875 aa24.54■■□□□ 1.52
PPM1N-206ENST00000415077 USHBP1Q8N6Y0 703 aa24.54■■□□□ 1.52
PPM1N-206ENST00000415077 MBIPQ9NS73 344 aa24.54■■□□□ 1.52
PPM1N-206ENST00000415077 PDE3AQ14432 1141 aa24.54■■□□□ 1.52
PPM1N-206ENST00000415077 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
PPM1N-206ENST00000415077 AXIN2Q9Y2T1 843 aa24.52■■□□□ 1.52
PPM1N-206ENST00000415077 CABLES1Q8TDN4 633 aa24.51■■□□□ 1.51
PPM1N-206ENST00000415077 ANKRD24Q8TF21 1146 aa24.51■■□□□ 1.51
PPM1N-206ENST00000415077 SMC4Q9NTJ3 1288 aa24.51■■□□□ 1.51
PPM1N-206ENST00000415077 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
PPM1N-206ENST00000415077 SSH1Q8WYL5 1049 aa24.49■■□□□ 1.51
PPM1N-206ENST00000415077 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
PPM1N-206ENST00000415077 ZNF428Q96B54 188 aa24.49■■□□□ 1.51
PPM1N-206ENST00000415077 HTATSF1O43719 755 aaKnown RBP24.48■■□□□ 1.51
PPM1N-206ENST00000415077 GNAT3A8MTJ3 354 aa24.47■■□□□ 1.51
PPM1N-206ENST00000415077 PANK1Q8TE04 598 aa24.47■■□□□ 1.51
PPM1N-206ENST00000415077 RGPD2P0DJD1 1756 aa24.46■■□□□ 1.51
PPM1N-206ENST00000415077 CHL1O00533 1208 aa24.46■■□□□ 1.51
PPM1N-206ENST00000415077 ALDH1L2Q3SY69 923 aa24.46■■□□□ 1.51
PPM1N-206ENST00000415077 VAMP4O75379 141 aa24.45■■□□□ 1.5
PPM1N-206ENST00000415077 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms