RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 EIF4A2Q14240 407 aaKnown RBP19.81■□□□□ 0.76
LRCH3-202ENST00000414675 FMN2Q9NZ56 1722 aa19.8■□□□□ 0.76
LRCH3-202ENST00000414675 SSH1Q8WYL5 1049 aa19.8■□□□□ 0.76
LRCH3-202ENST00000414675 CHD2O14647 1828 aaKnown RBP19.8■□□□□ 0.76
LRCH3-202ENST00000414675 NGDNQ8NEJ9 315 aaKnown RBP19.79■□□□□ 0.76
LRCH3-202ENST00000414675 BACH2Q9BYV9 841 aa19.79■□□□□ 0.76
LRCH3-202ENST00000414675 SOX12O15370 315 aa19.79■□□□□ 0.76
LRCH3-202ENST00000414675 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 AEBP1Q8IUX7 1158 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 SMC4Q9NTJ3 1288 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 PIK3C2AO00443 1686 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 TTC21AQ8NDW8 1320 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
LRCH3-202ENST00000414675 HSP90AB2PQ58FF8 381 aa19.78■□□□□ 0.76
LRCH3-202ENST00000414675 ANKARQ7Z5J8 1434 aa19.77■□□□□ 0.76
LRCH3-202ENST00000414675 ZKSCAN2Q63HK3 967 aa19.77■□□□□ 0.75
LRCH3-202ENST00000414675 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.75
LRCH3-202ENST00000414675 RGPD1P0DJD0 1748 aa19.76■□□□□ 0.75
LRCH3-202ENST00000414675 RBM33Q96EV2 1170 aaKnown RBP19.75■□□□□ 0.75
LRCH3-202ENST00000414675 SULT6B1Q6IMI4 303 aa19.74■□□□□ 0.75
LRCH3-202ENST00000414675 PCDHB15Q9Y5E8 787 aa19.74■□□□□ 0.75
LRCH3-202ENST00000414675 MAP3K19Q56UN5 1328 aa19.74■□□□□ 0.75
LRCH3-202ENST00000414675 MARF1Q9Y4F3 1742 aaKnown RBP19.73■□□□□ 0.75
LRCH3-202ENST00000414675 FAM83GA6ND36 823 aa19.73■□□□□ 0.75
LRCH3-202ENST00000414675 TRIM27P14373 513 aa19.73■□□□□ 0.75
LRCH3-202ENST00000414675 DZIP1LQ8IYY4 767 aaKnown RBP19.73■□□□□ 0.75
LRCH3-202ENST00000414675 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
LRCH3-202ENST00000414675 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
LRCH3-202ENST00000414675 NOB1Q9ULX3 412 aaKnown RBP19.72■□□□□ 0.75
LRCH3-202ENST00000414675 RGS3P49796 1198 aa19.71■□□□□ 0.75
LRCH3-202ENST00000414675 DCTN1Q14203 1278 aa19.71■□□□□ 0.75
LRCH3-202ENST00000414675 IFT57Q9NWB7 429 aa19.71■□□□□ 0.75
LRCH3-202ENST00000414675 FTSJ3Q8IY81 847 aaKnown RBP19.71■□□□□ 0.75
LRCH3-202ENST00000414675 MBIPQ9NS73 344 aa19.71■□□□□ 0.75
LRCH3-202ENST00000414675 ATF7IPQ6VMQ6 1270 aa19.7■□□□□ 0.74
LRCH3-202ENST00000414675 TSPYL6Q8N831 410 aa19.7■□□□□ 0.74
LRCH3-202ENST00000414675 GNAI1P63096 354 aa19.69■□□□□ 0.74
LRCH3-202ENST00000414675 CALD1Q05682 793 aaKnown RBP19.69■□□□□ 0.74
LRCH3-202ENST00000414675 AAMPQ13685 434 aa19.69■□□□□ 0.74
LRCH3-202ENST00000414675 ANP32AP39687 249 aaKnown RBP19.69■□□□□ 0.74
LRCH3-202ENST00000414675 NUTM2GQ5VZR2 741 aa19.69■□□□□ 0.74
LRCH3-202ENST00000414675 SBNO1A3KN83 1393 aa19.69■□□□□ 0.74
LRCH3-202ENST00000414675 NLRP6P59044 892 aa19.68■□□□□ 0.74
LRCH3-202ENST00000414675 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
LRCH3-202ENST00000414675 ALDH1L2Q3SY69 923 aa19.68■□□□□ 0.74
LRCH3-202ENST00000414675 VAMP4O75379 141 aa19.68■□□□□ 0.74
LRCH3-202ENST00000414675 FLT4P35916 1363 aa19.68■□□□□ 0.74
LRCH3-202ENST00000414675 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
LRCH3-202ENST00000414675 CFAP44Q96MT7 982 aa19.67■□□□□ 0.74
LRCH3-202ENST00000414675 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
LRCH3-202ENST00000414675 NPHP4O75161 1426 aaPredicted RBP19.66■□□□□ 0.74
LRCH3-202ENST00000414675 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
LRCH3-202ENST00000414675 TMEM57Q8N5G2 664 aa19.65■□□□□ 0.74
LRCH3-202ENST00000414675 ARHGEF10O15013 1369 aa19.65■□□□□ 0.74
LRCH3-202ENST00000414675 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
LRCH3-202ENST00000414675 C8orf34Q49A92 452 aa19.65■□□□□ 0.74
LRCH3-202ENST00000414675 IPO9Q96P70 1041 aaKnown RBP19.65■□□□□ 0.74
LRCH3-202ENST00000414675 PHF8Q9UPP1 1060 aa19.65■□□□□ 0.74
LRCH3-202ENST00000414675 ITPRIPQ8IWB1 547 aa19.64■□□□□ 0.74
LRCH3-202ENST00000414675 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
LRCH3-202ENST00000414675 AMPHP49418 695 aa19.64■□□□□ 0.73
LRCH3-202ENST00000414675 C8orf58Q8NAV2 365 aa19.64■□□□□ 0.73
LRCH3-202ENST00000414675 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
LRCH3-202ENST00000414675 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
LRCH3-202ENST00000414675 BRPF1P55201 1214 aaPredicted RBP19.63■□□□□ 0.73
LRCH3-202ENST00000414675 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
LRCH3-202ENST00000414675 ZNF428Q96B54 188 aa19.63■□□□□ 0.73
LRCH3-202ENST00000414675 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
LRCH3-202ENST00000414675 MCM10Q7L590 875 aa19.62■□□□□ 0.73
LRCH3-202ENST00000414675 EYA1Q99502 592 aa19.62■□□□□ 0.73
LRCH3-202ENST00000414675 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
LRCH3-202ENST00000414675 TWISTNBQ3B726 338 aaPredicted RBP19.62■□□□□ 0.73
LRCH3-202ENST00000414675 DDX19BQ9UMR2 479 aa19.62■□□□□ 0.73
LRCH3-202ENST00000414675 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
LRCH3-202ENST00000414675 KDM4FA0A1W2PPD8 638 aa19.61■□□□□ 0.73
LRCH3-202ENST00000414675 KDRP35968 1356 aa19.61■□□□□ 0.73
LRCH3-202ENST00000414675 FOXO3O43524 673 aa19.6■□□□□ 0.73
LRCH3-202ENST00000414675 IGSF1Q8N6C5 1336 aa19.6■□□□□ 0.73
LRCH3-202ENST00000414675 HOXC9P31274 260 aa19.59■□□□□ 0.73
LRCH3-202ENST00000414675 RWDD1Q9H446 243 aaPredicted RBP19.59■□□□□ 0.73
LRCH3-202ENST00000414675 MTHFSDQ2M296 383 aaKnown RBP19.59■□□□□ 0.73
LRCH3-202ENST00000414675 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
LRCH3-202ENST00000414675 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
LRCH3-202ENST00000414675 NWD1Q149M9 1564 aa19.58■□□□□ 0.73
LRCH3-202ENST00000414675 KRT24Q2M2I5 525 aa19.58■□□□□ 0.72
LRCH3-202ENST00000414675 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
LRCH3-202ENST00000414675 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.72
LRCH3-202ENST00000414675 CRB1P82279 1406 aa19.57■□□□□ 0.72
LRCH3-202ENST00000414675 CHL1O00533 1208 aa19.57■□□□□ 0.72
LRCH3-202ENST00000414675 LTN1O94822 1766 aa19.57■□□□□ 0.72
LRCH3-202ENST00000414675 VIRMAQ69YN4 1812 aaKnown RBP19.57■□□□□ 0.72
LRCH3-202ENST00000414675 KIF24Q5T7B8 1368 aa19.55■□□□□ 0.72
LRCH3-202ENST00000414675 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
LRCH3-202ENST00000414675 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
LRCH3-202ENST00000414675 NFAT5O94916 1531 aa19.54■□□□□ 0.72
LRCH3-202ENST00000414675 ORAI2Q96SN7 254 aa19.54■□□□□ 0.72
LRCH3-202ENST00000414675 LTV1Q96GA3 475 aaPredicted RBP19.53■□□□□ 0.72
LRCH3-202ENST00000414675 PSME1Q06323 249 aa19.53■□□□□ 0.72
LRCH3-202ENST00000414675 ZBTB47Q9UFB7 747 aaPredicted RBP19.53■□□□□ 0.72
LRCH3-202ENST00000414675 ABCC4O15439 1325 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms