RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
SNRPE-202ENST00000414487 U2SURPO15042 1029 aaKnown RBP11.85□□□□□ -0.51
SNRPE-202ENST00000414487 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
SNRPE-202ENST00000414487 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
SNRPE-202ENST00000414487 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
SNRPE-202ENST00000414487 LAS1LQ9Y4W2 734 aaKnown RBP11.85□□□□□ -0.51
SNRPE-202ENST00000414487 KNDC1Q76NI1 1749 aa11.85□□□□□ -0.51
SNRPE-202ENST00000414487 CYB5RLQ6IPT4 315 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 DZIP1LQ8IYY4 767 aaKnown RBP11.84□□□□□ -0.51
SNRPE-202ENST00000414487 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNRPE-202ENST00000414487 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 PCDHB15Q9Y5E8 787 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
SNRPE-202ENST00000414487 EDC4Q6P2E9 1401 aaKnown RBP11.84□□□□□ -0.51
SNRPE-202ENST00000414487 NRXN3Q9Y4C0 1643 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 LRRC7Q96NW7 1537 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 FCHSD2O94868 740 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 NEFMP07197 916 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
SNRPE-202ENST00000414487 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
SNRPE-202ENST00000414487 CABP1Q9NZU7 370 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 TECPR2O15040 1411 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 CPSF1Q10570 1443 aaKnown RBP11.83□□□□□ -0.52
SNRPE-202ENST00000414487 PPIP5K1Q6PFW1 1433 aa11.83□□□□□ -0.52
SNRPE-202ENST00000414487 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
SNRPE-202ENST00000414487 SMC4Q9NTJ3 1288 aa11.82□□□□□ -0.52
SNRPE-202ENST00000414487 TNNQ9UQP3 1299 aa11.82□□□□□ -0.52
SNRPE-202ENST00000414487 USP19O94966 1318 aa11.82□□□□□ -0.52
SNRPE-202ENST00000414487 CDK12Q9NYV4 1490 aaPredicted RBP11.82□□□□□ -0.52
SNRPE-202ENST00000414487 CPS1P31327 1500 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 C7P10643 843 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 ALDH1L2Q3SY69 923 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
SNRPE-202ENST00000414487 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 BCL2L13Q9BXK5 485 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 FBXO3Q9UK99 471 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
SNRPE-202ENST00000414487 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
SNRPE-202ENST00000414487 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
SNRPE-202ENST00000414487 RIPK4P57078 832 aa11.8□□□□□ -0.52
SNRPE-202ENST00000414487 CALD1Q05682 793 aaKnown RBP11.8□□□□□ -0.52
SNRPE-202ENST00000414487 HDAC1Q13547 482 aaPredicted RBP11.8□□□□□ -0.52
SNRPE-202ENST00000414487 SSH1Q8WYL5 1049 aa11.8□□□□□ -0.52
SNRPE-202ENST00000414487 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
SNRPE-202ENST00000414487 RSPH6AQ9H0K4 717 aa11.8□□□□□ -0.52
SNRPE-202ENST00000414487 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
SNRPE-202ENST00000414487 TSPOAP1O95153 1857 aa11.79□□□□□ -0.52
SNRPE-202ENST00000414487 IPO8O15397 1037 aaKnown RBP11.79□□□□□ -0.52
SNRPE-202ENST00000414487 TIE1P35590 1138 aa11.79□□□□□ -0.52
SNRPE-202ENST00000414487 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
SNRPE-202ENST00000414487 POLKQ9UBT6 870 aa11.79□□□□□ -0.52
SNRPE-202ENST00000414487 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
SNRPE-202ENST00000414487 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
SNRPE-202ENST00000414487 TRIM27P14373 513 aa11.78□□□□□ -0.52
SNRPE-202ENST00000414487 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
SNRPE-202ENST00000414487 NFE2L2Q16236 605 aa11.78□□□□□ -0.52
SNRPE-202ENST00000414487 BECN1Q14457 450 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 TNRQ92752 1358 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 AKAP12Q02952 1782 aa11.77□□□□□ -0.53
SNRPE-202ENST00000414487 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
SNRPE-202ENST00000414487 PRKAR2BP31323 418 aa11.76□□□□□ -0.53
SNRPE-202ENST00000414487 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
SNRPE-202ENST00000414487 UPF2Q9HAU5 1272 aaKnown RBP11.76□□□□□ -0.53
SNRPE-202ENST00000414487 METP08581 1390 aa11.76□□□□□ -0.53
SNRPE-202ENST00000414487 PIK3R4Q99570 1358 aa11.76□□□□□ -0.53
SNRPE-202ENST00000414487 NRKQ7Z2Y5 1582 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 C3P01024 1663 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 IL13P35225 146 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNRPE-202ENST00000414487 SMC5Q8IY18 1101 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 TBC1D32Q96NH3 1257 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 NOB1Q9ULX3 412 aaKnown RBP11.75□□□□□ -0.53
SNRPE-202ENST00000414487 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
SNRPE-202ENST00000414487 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
SNRPE-202ENST00000414487 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
SNRPE-202ENST00000414487 CHMP4BQ9H444 224 aaKnown RBP11.74□□□□□ -0.53
SNRPE-202ENST00000414487 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
SNRPE-202ENST00000414487 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
SNRPE-202ENST00000414487 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
SNRPE-202ENST00000414487 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
SNRPE-202ENST00000414487 SEC24BO95487 1268 aa11.73□□□□□ -0.53
SNRPE-202ENST00000414487 GNAI1P63096 354 aa11.73□□□□□ -0.53
SNRPE-202ENST00000414487 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
SNRPE-202ENST00000414487 ARHGAP45Q92619 1136 aa11.73□□□□□ -0.53
SNRPE-202ENST00000414487 NUDT16Q96DE0 195 aaKnown RBP11.73□□□□□ -0.53
SNRPE-202ENST00000414487 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
SNRPE-202ENST00000414487 UBR1Q8IWV7 1749 aa11.72□□□□□ -0.53
SNRPE-202ENST00000414487 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
SNRPE-202ENST00000414487 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
SNRPE-202ENST00000414487 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
SNRPE-202ENST00000414487 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms