RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 PTMSP20962 102 aa11.11□□□□□ -0.63
SIK3-202ENST00000413553 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
SIK3-202ENST00000413553 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
SIK3-202ENST00000413553 ATF7IPQ6VMQ6 1270 aa11.11□□□□□ -0.63
SIK3-202ENST00000413553 SSH1Q8WYL5 1049 aa11.11□□□□□ -0.63
SIK3-202ENST00000413553 TMEM57Q8N5G2 664 aa11.1□□□□□ -0.63
SIK3-202ENST00000413553 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
SIK3-202ENST00000413553 MYO3AQ8NEV4 1616 aa11.1□□□□□ -0.63
SIK3-202ENST00000413553 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
SIK3-202ENST00000413553 ABCC11Q96J66 1382 aa11.1□□□□□ -0.63
SIK3-202ENST00000413553 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
SIK3-202ENST00000413553 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
SIK3-202ENST00000413553 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
SIK3-202ENST00000413553 PTPRMP28827 1452 aa11.09□□□□□ -0.63
SIK3-202ENST00000413553 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
SIK3-202ENST00000413553 CD2BP2O95400 341 aaKnown RBP11.09□□□□□ -0.63
SIK3-202ENST00000413553 SSFA2P28290 1259 aa11.09□□□□□ -0.63
SIK3-202ENST00000413553 K7ELQ4 463 aaPredicted RBP11.08□□□□□ -0.64
SIK3-202ENST00000413553 ZSCAN30Q86W11 494 aa11.08□□□□□ -0.64
SIK3-202ENST00000413553 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
SIK3-202ENST00000413553 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
SIK3-202ENST00000413553 PUS7Q96PZ0 661 aaKnown RBP11.08□□□□□ -0.64
SIK3-202ENST00000413553 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
SIK3-202ENST00000413553 NCLP19338 710 aaKnown RBP11.07□□□□□ -0.64
SIK3-202ENST00000413553 NUCB1Q02818 461 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 CABP1Q9NZU7 370 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 ATAD2Q6PL18 1390 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
SIK3-202ENST00000413553 RBM10P98175 930 aaKnown RBP11.07□□□□□ -0.64
SIK3-202ENST00000413553 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
SIK3-202ENST00000413553 ZBTB40Q9NUA8 1239 aa11.07□□□□□ -0.64
SIK3-202ENST00000413553 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.06□□□□□ -0.64
SIK3-202ENST00000413553 PPP1R9BQ96SB3 815 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
SIK3-202ENST00000413553 ADGRB2O60241 1585 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 ADAMTS13Q76LX8 1427 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 TULP4Q9NRJ4 1543 aa11.06□□□□□ -0.64
SIK3-202ENST00000413553 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
SIK3-202ENST00000413553 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
SIK3-202ENST00000413553 KIF2CQ99661 725 aa11.05□□□□□ -0.64
SIK3-202ENST00000413553 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
SIK3-202ENST00000413553 IPO8O15397 1037 aaKnown RBP11.05□□□□□ -0.64
SIK3-202ENST00000413553 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
SIK3-202ENST00000413553 CEP170BQ9Y4F5 1589 aaPredicted RBP11.05□□□□□ -0.64
SIK3-202ENST00000413553 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
SIK3-202ENST00000413553 KLHL40Q2TBA0 621 aa11.05□□□□□ -0.64
SIK3-202ENST00000413553 OFD1O75665 1012 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 BAG4O95429 457 aaKnown RBP11.04□□□□□ -0.64
SIK3-202ENST00000413553 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 ANKRD36BQ8N2N9 1353 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 SLIT1O75093 1534 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
SIK3-202ENST00000413553 TBC1D9Q6ZT07 1266 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 C1orf115Q9H7X2 142 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
SIK3-202ENST00000413553 ADAMTSL3P82987 1691 aa11.04□□□□□ -0.64
SIK3-202ENST00000413553 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 CALD1Q05682 793 aaKnown RBP11.03□□□□□ -0.64
SIK3-202ENST00000413553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.643e-6■■□□□ 11.7
SIK3-202ENST00000413553 SIRT1Q96EB6 747 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 USP32Q8NFA0 1604 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 ARHGAP23Q9P227 1491 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 NUDT16Q96DE0 195 aaKnown RBP11.03□□□□□ -0.64
SIK3-202ENST00000413553 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
SIK3-202ENST00000413553 DLC1Q96QB1 1528 aa11.02□□□□□ -0.64
SIK3-202ENST00000413553 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
SIK3-202ENST00000413553 A0A1W2PP64 1363 aa11.02□□□□□ -0.65
SIK3-202ENST00000413553 RIPK4P57078 832 aa11.02□□□□□ -0.65
SIK3-202ENST00000413553 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
SIK3-202ENST00000413553 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
SIK3-202ENST00000413553 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
SIK3-202ENST00000413553 ARID3AQ99856 593 aa11.01□□□□□ -0.65
SIK3-202ENST00000413553 IBTKQ9P2D0 1353 aaPredicted RBP11.01□□□□□ -0.65
SIK3-202ENST00000413553 KCNA6P17658 529 aa11.01□□□□□ -0.65
SIK3-202ENST00000413553 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
SIK3-202ENST00000413553 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
SIK3-202ENST00000413553 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
SIK3-202ENST00000413553 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
SIK3-202ENST00000413553 ZSCAN23Q3MJ62 389 aa11□□□□□ -0.65
SIK3-202ENST00000413553 GCC1Q96CN9 775 aa11□□□□□ -0.65
SIK3-202ENST00000413553 TECPR2O15040 1411 aa11□□□□□ -0.65
SIK3-202ENST00000413553 CDC45O75419 566 aa11□□□□□ -0.65
SIK3-202ENST00000413553 RBM33Q96EV2 1170 aaKnown RBP11□□□□□ -0.65
SIK3-202ENST00000413553 PPIP5K1Q6PFW1 1433 aa10.99□□□□□ -0.65
SIK3-202ENST00000413553 PLEKHF1Q96S99 279 aa10.99□□□□□ -0.65
SIK3-202ENST00000413553 NSD2O96028 1365 aa10.99□□□□□ -0.65
SIK3-202ENST00000413553 ZNF445P59923 1031 aa10.99□□□□□ -0.65
SIK3-202ENST00000413553 PTPRUQ92729 1446 aa10.99□□□□□ -0.65
SIK3-202ENST00000413553 UQCRHLA0A096LP55 91 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 UQCRHP07919 91 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 NUCB2P80303 420 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 RBSNQ9H1K0 784 aa10.98□□□□□ -0.65
SIK3-202ENST00000413553 IL16Q14005 1332 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms