RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 IGHDP01880 384 aa26.88■■□□□ 1.89
SLC13A3-204ENST00000413164 NEFMP07197 916 aa26.88■■□□□ 1.89
SLC13A3-204ENST00000413164 MYT1Q01538 1121 aa26.88■■□□□ 1.89
SLC13A3-204ENST00000413164 NUTM2FA1L443 756 aa26.86■■□□□ 1.89
SLC13A3-204ENST00000413164 USP31Q70CQ4 1352 aa26.85■■□□□ 1.89
SLC13A3-204ENST00000413164 ZKSCAN2Q63HK3 967 aa26.85■■□□□ 1.89
SLC13A3-204ENST00000413164 RBM33Q96EV2 1170 aaKnown RBP26.84■■□□□ 1.89
SLC13A3-204ENST00000413164 IPO9Q96P70 1041 aaKnown RBP26.84■■□□□ 1.89
SLC13A3-204ENST00000413164 SSH1Q8WYL5 1049 aa26.83■■□□□ 1.89
SLC13A3-204ENST00000413164 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
SLC13A3-204ENST00000413164 SMC4Q9NTJ3 1288 aa26.82■■□□□ 1.88
SLC13A3-204ENST00000413164 NWD1Q149M9 1564 aa26.82■■□□□ 1.88
SLC13A3-204ENST00000413164 RGPD8O14715 1765 aaPredicted RBP26.82■■□□□ 1.88
SLC13A3-204ENST00000413164 PROSER2Q86WR7 435 aaPredicted RBP26.81■■□□□ 1.88
SLC13A3-204ENST00000413164 DLG5Q8TDM6 1919 aa26.81■■□□□ 1.88
SLC13A3-204ENST00000413164 TTC21AQ8NDW8 1320 aa26.8■■□□□ 1.88
SLC13A3-204ENST00000413164 MVPQ14764 893 aaKnown RBP26.8■■□□□ 1.88
SLC13A3-204ENST00000413164 PEAK1Q9H792 1746 aa26.8■■□□□ 1.88
SLC13A3-204ENST00000413164 DZIP1LQ8IYY4 767 aaKnown RBP26.79■■□□□ 1.88
SLC13A3-204ENST00000413164 CALD1Q05682 793 aaKnown RBP26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 C14orf37Q86TY3 774 aa26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 NOP58Q9Y2X3 529 aaKnown RBP26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 PCDHB15Q9Y5E8 787 aa26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 TRIM27P14373 513 aa26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 ANKARQ7Z5J8 1434 aa26.78■■□□□ 1.88
SLC13A3-204ENST00000413164 EIF4A2Q14240 407 aaKnown RBP26.77■■□□□ 1.88
SLC13A3-204ENST00000413164 PMFBP1Q8TBY8 1022 aa26.77■■□□□ 1.88
SLC13A3-204ENST00000413164 RGPD1P0DJD0 1748 aa26.77■■□□□ 1.88
SLC13A3-204ENST00000413164 ALDH1L2Q3SY69 923 aa26.77■■□□□ 1.88
SLC13A3-204ENST00000413164 ZNF428Q96B54 188 aa26.77■■□□□ 1.88
SLC13A3-204ENST00000413164 ZNF853P0CG23 659 aa26.76■■□□□ 1.87
SLC13A3-204ENST00000413164 ERICH6Q7L0X2 663 aa26.76■■□□□ 1.87
SLC13A3-204ENST00000413164 ATF7IPQ6VMQ6 1270 aa26.75■■□□□ 1.87
SLC13A3-204ENST00000413164 IFT57Q9NWB7 429 aa26.75■■□□□ 1.87
SLC13A3-204ENST00000413164 STRCP1A6NGW2 1772 aa26.75■■□□□ 1.87
SLC13A3-204ENST00000413164 FMN2Q9NZ56 1722 aa26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 BRPF1P55201 1214 aaPredicted RBP26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 FAM161AQ3B820 660 aa26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 C8orf34Q49A92 452 aa26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 FTSJ3Q8IY81 847 aaKnown RBP26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 THUMPD2Q9BTF0 503 aaKnown RBP26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 KIF16BQ96L93 1317 aa26.74■■□□□ 1.87
SLC13A3-204ENST00000413164 LMOD3Q0VAK6 560 aa26.73■■□□□ 1.87
SLC13A3-204ENST00000413164 ZNF335Q9H4Z2 1342 aaPredicted RBP26.73■■□□□ 1.87
SLC13A3-204ENST00000413164 RGS3P49796 1198 aa26.73■■□□□ 1.87
SLC13A3-204ENST00000413164 GNAI1P63096 354 aa26.73■■□□□ 1.87
SLC13A3-204ENST00000413164 NOB1Q9ULX3 412 aaKnown RBP26.73■■□□□ 1.87
SLC13A3-204ENST00000413164 PIK3C2AO00443 1686 aa26.72■■□□□ 1.87
SLC13A3-204ENST00000413164 PAK3O75914 559 aaPredicted RBP26.72■■□□□ 1.87
SLC13A3-204ENST00000413164 NGDNQ8NEJ9 315 aaKnown RBP26.7■■□□□ 1.87
SLC13A3-204ENST00000413164 HSP90AB2PQ58FF8 381 aa26.7■■□□□ 1.86
SLC13A3-204ENST00000413164 AEBP1Q8IUX7 1158 aa26.7■■□□□ 1.86
SLC13A3-204ENST00000413164 NPM2Q86SE8 214 aaKnown RBP26.69■■□□□ 1.86
SLC13A3-204ENST00000413164 CFAP44Q96MT7 982 aa26.69■■□□□ 1.86
SLC13A3-204ENST00000413164 LAS1LQ9Y4W2 734 aaKnown RBP26.69■■□□□ 1.86
SLC13A3-204ENST00000413164 ADGRL3Q9HAR2 1447 aa26.69■■□□□ 1.86
SLC13A3-204ENST00000413164 VAMP4O75379 141 aa26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 SULT6B1Q6IMI4 303 aa26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 MBIPQ9NS73 344 aa26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 IPO8O15397 1037 aaKnown RBP26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 DDX19BQ9UMR2 479 aa26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
SLC13A3-204ENST00000413164 MAP3K19Q56UN5 1328 aa26.67■■□□□ 1.86
SLC13A3-204ENST00000413164 USP54Q70EL1 1684 aa26.67■■□□□ 1.86
SLC13A3-204ENST00000413164 RWDD1Q9H446 243 aaPredicted RBP26.66■■□□□ 1.86
SLC13A3-204ENST00000413164 ZBTB47Q9UFB7 747 aaPredicted RBP26.66■■□□□ 1.86
SLC13A3-204ENST00000413164 SBNO1A3KN83 1393 aa26.65■■□□□ 1.86
SLC13A3-204ENST00000413164 MARF1Q9Y4F3 1742 aaKnown RBP26.65■■□□□ 1.86
SLC13A3-204ENST00000413164 FAM83GA6ND36 823 aa26.65■■□□□ 1.86
SLC13A3-204ENST00000413164 VIRMAQ69YN4 1812 aaKnown RBP26.64■■□□□ 1.86
SLC13A3-204ENST00000413164 FLT4P35916 1363 aa26.64■■□□□ 1.86
SLC13A3-204ENST00000413164 TSPYL6Q8N831 410 aa26.64■■□□□ 1.86
SLC13A3-204ENST00000413164 ARHGEF10O15013 1369 aa26.63■■□□□ 1.85
SLC13A3-204ENST00000413164 TMEM57Q8N5G2 664 aa26.63■■□□□ 1.85
SLC13A3-204ENST00000413164 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
SLC13A3-204ENST00000413164 ITPRIPQ8IWB1 547 aa26.63■■□□□ 1.85
SLC13A3-204ENST00000413164 MRPL50Q8N5N7 158 aaKnown RBP26.61■■□□□ 1.85
SLC13A3-204ENST00000413164 ARHGAP45Q92619 1136 aa26.61■■□□□ 1.85
SLC13A3-204ENST00000413164 HDAC1Q13547 482 aaPredicted RBP26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 ZBTB40Q9NUA8 1239 aa26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 NCOA3Q9Y6Q9 1424 aa26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 KDRP35968 1356 aa26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 SOX12O15370 315 aa26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 DCTN1Q14203 1278 aa26.6■■□□□ 1.85
SLC13A3-204ENST00000413164 PDZRN3Q9UPQ7 1066 aa26.58■■□□□ 1.85
SLC13A3-204ENST00000413164 ATF3P18847 181 aa26.58■■□□□ 1.85
SLC13A3-204ENST00000413164 TWISTNBQ3B726 338 aaPredicted RBP26.58■■□□□ 1.85
SLC13A3-204ENST00000413164 C8orf58Q8NAV2 365 aa26.58■■□□□ 1.85
SLC13A3-204ENST00000413164 KIF24Q5T7B8 1368 aa26.57■■□□□ 1.84
SLC13A3-204ENST00000413164 NLRP6P59044 892 aa26.56■■□□□ 1.84
SLC13A3-204ENST00000413164 MSH6P52701 1360 aa26.55■■□□□ 1.84
SLC13A3-204ENST00000413164 IGSF1Q8N6C5 1336 aa26.55■■□□□ 1.84
SLC13A3-204ENST00000413164 CHL1O00533 1208 aa26.54■■□□□ 1.84
SLC13A3-204ENST00000413164 XIRP1Q702N8 1843 aaKnown RBP26.54■■□□□ 1.84
SLC13A3-204ENST00000413164 ELL2O00472 640 aaPredicted RBP26.53■■□□□ 1.84
SLC13A3-204ENST00000413164 AMPHP49418 695 aa26.53■■□□□ 1.84
SLC13A3-204ENST00000413164 ESCO1Q5FWF5 840 aa26.52■■□□□ 1.84
SLC13A3-204ENST00000413164 DDRGK1Q96HY6 314 aa26.52■■□□□ 1.84
SLC13A3-204ENST00000413164 CADPS2Q86UW7 1296 aa26.51■■□□□ 1.83
SLC13A3-204ENST00000413164 ABCC4O15439 1325 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms