RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 EVA1CP58658 441 aa12.66□□□□□ -0.38
SMPD4-203ENST00000412570 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
SMPD4-203ENST00000412570 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
SMPD4-203ENST00000412570 ANKRD24Q8TF21 1146 aa12.66□□□□□ -0.38
SMPD4-203ENST00000412570 POLR3AO14802 1390 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-203ENST00000412570 EXOC6Q8TAG9 804 aa12.65□□□□□ -0.38
SMPD4-203ENST00000412570 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
SMPD4-203ENST00000412570 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
SMPD4-203ENST00000412570 MPRIPQ6WCQ1 1025 aa12.64□□□□□ -0.39
SMPD4-203ENST00000412570 MTHFSDQ2M296 383 aaKnown RBP12.64□□□□□ -0.39
SMPD4-203ENST00000412570 TOM1L2Q6ZVM7 507 aa12.64□□□□□ -0.39
SMPD4-203ENST00000412570 DDX54Q8TDD1 881 aaKnown RBP12.64□□□□□ -0.39
SMPD4-203ENST00000412570 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
SMPD4-203ENST00000412570 NSD2O96028 1365 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 CDC42BPGQ6DT37 1551 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 DUSP27Q5VZP5 1158 aa12.63□□□□□ -0.39
SMPD4-203ENST00000412570 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
SMPD4-203ENST00000412570 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
SMPD4-203ENST00000412570 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 FCHSD2O94868 740 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 USP32Q8NFA0 1604 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 KIAA0232Q92628 1395 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
SMPD4-203ENST00000412570 CHD2O14647 1828 aaKnown RBP12.61□□□□□ -0.39
SMPD4-203ENST00000412570 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
SMPD4-203ENST00000412570 CCDC136Q96JN2 1154 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 ARXQ96QS3 562 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-203ENST00000412570 EIF2S2P20042 333 aaKnown RBP12.6□□□□□ -0.39
SMPD4-203ENST00000412570 ZNF530Q6P9A1 599 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-203ENST00000412570 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
SMPD4-203ENST00000412570 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
SMPD4-203ENST00000412570 MST1RQ04912 1400 aa12.59□□□□□ -0.39
SMPD4-203ENST00000412570 ZNF142P52746 1687 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-203ENST00000412570 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
SMPD4-203ENST00000412570 ZNF330Q9Y3S2 320 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-203ENST00000412570 XRN1Q8IZH2 1706 aaKnown RBP12.59□□□□□ -0.39
SMPD4-203ENST00000412570 FLT4P35916 1363 aa12.59□□□□□ -0.39
SMPD4-203ENST00000412570 PIP4K2AP48426 406 aaPredicted RBP12.58□□□□□ -0.39
SMPD4-203ENST00000412570 RRP1P56182 461 aaKnown RBP12.58□□□□□ -0.39
SMPD4-203ENST00000412570 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.39
SMPD4-203ENST00000412570 BTG4Q9NY30 223 aa12.58□□□□□ -0.39
SMPD4-203ENST00000412570 STRCP1A6NGW2 1772 aa12.58□□□□□ -0.39
SMPD4-203ENST00000412570 E9PSI1 815 aa12.58□□□□□ -0.4
SMPD4-203ENST00000412570 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
SMPD4-203ENST00000412570 ANXA1P04083 346 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 ARHGEF25Q86VW2 580 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 IP6K1Q92551 441 aa12.57□□□□□ -0.4
SMPD4-203ENST00000412570 LARP1Q6PKG0 1096 aaKnown RBP12.57□□□□□ -0.4
SMPD4-203ENST00000412570 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 ITSN1Q15811 1721 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 SLC39A6Q13433 755 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 BLMP54132 1417 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-203ENST00000412570 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
SMPD4-203ENST00000412570 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 SPATA31A3Q5VYP0 1347 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 MYH16Q9H6N6 1097 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 KCNQ3O43525 872 aa12.55□□□□□ -0.4
SMPD4-203ENST00000412570 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
SMPD4-203ENST00000412570 TOM1O60784 492 aa12.54□□□□□ -0.4
SMPD4-203ENST00000412570 KNDC1Q76NI1 1749 aa12.54□□□□□ -0.4
SMPD4-203ENST00000412570 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
SMPD4-203ENST00000412570 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
SMPD4-203ENST00000412570 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
SMPD4-203ENST00000412570 SLC4A10Q6U841 1118 aa12.54□□□□□ -0.4
SMPD4-203ENST00000412570 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
SMPD4-203ENST00000412570 TEFQ10587 303 aa12.53□□□□□ -0.4
SMPD4-203ENST00000412570 SSH1Q8WYL5 1049 aa12.52□□□□□ -0.4
SMPD4-203ENST00000412570 SSH2Q76I76 1423 aa12.52□□□□□ -0.4
SMPD4-203ENST00000412570 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
SMPD4-203ENST00000412570 KIF20BQ96Q89 1820 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
SMPD4-203ENST00000412570 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 APBB1O00213 710 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 PTCD1O75127 700 aaKnown RBP12.51□□□□□ -0.41
SMPD4-203ENST00000412570 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
SMPD4-203ENST00000412570 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
SMPD4-203ENST00000412570 FMN2Q9NZ56 1722 aa12.51□□□□□ -0.41
SMPD4-203ENST00000412570 GNAT3A8MTJ3 354 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 IL17REQ8NFR9 667 aa12.5□□□□□ -0.41
SMPD4-203ENST00000412570 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms