RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-203ENST00000409938 ITSN1Q15811 1721 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 NALCNQ8IZF0 1738 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 TOPAZ1Q8N9V7 1692 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 XRCC6P12956 609 aaKnown RBP eCLIP9.86□□□□□ -0.83
EPHA4-203ENST00000409938 IL13P35225 146 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 SIRT2Q8IXJ6 389 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 CPS1P31327 1500 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 IFT57Q9NWB7 429 aa9.86□□□□□ -0.83
EPHA4-203ENST00000409938 TECPR2O15040 1411 aa9.85□□□□□ -0.83
EPHA4-203ENST00000409938 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
EPHA4-203ENST00000409938 RRAGDQ9NQL2 400 aaPredicted RBP9.85□□□□□ -0.83
EPHA4-203ENST00000409938 TUBGCP6Q96RT7 1819 aa9.85□□□□□ -0.83
EPHA4-203ENST00000409938 PRKAR2BP31323 418 aa9.84□□□□□ -0.83
EPHA4-203ENST00000409938 CIZ1Q9ULV3 898 aaPredicted RBP9.84□□□□□ -0.83
EPHA4-203ENST00000409938 RGS12O14924 1447 aa9.84□□□□□ -0.83
EPHA4-203ENST00000409938 CLEC17AQ6ZS10 378 aa9.84□□□□□ -0.83
EPHA4-203ENST00000409938 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
EPHA4-203ENST00000409938 TRAK2O60296 914 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 RAB3GAP1Q15042 981 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 HSCBQ8IWL3 235 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 ISY1Q9ULR0 285 aaKnown RBP9.83□□□□□ -0.84
EPHA4-203ENST00000409938 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 PPP6R1Q9UPN7 881 aa9.83□□□□□ -0.84
EPHA4-203ENST00000409938 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
EPHA4-203ENST00000409938 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
EPHA4-203ENST00000409938 CHMP4BQ9H444 224 aaKnown RBP9.82□□□□□ -0.84
EPHA4-203ENST00000409938 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 DIP2BQ9P265 1576 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
EPHA4-203ENST00000409938 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
EPHA4-203ENST00000409938 GNAI1P63096 354 aa9.81□□□□□ -0.84
EPHA4-203ENST00000409938 CFAP44Q96MT7 982 aa9.81□□□□□ -0.84
EPHA4-203ENST00000409938 CD2BP2O95400 341 aaKnown RBP9.81□□□□□ -0.84
EPHA4-203ENST00000409938 TBC1D9Q6ZT07 1266 aa9.81□□□□□ -0.84
EPHA4-203ENST00000409938 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
EPHA4-203ENST00000409938 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
EPHA4-203ENST00000409938 SPRYD3Q8NCJ5 442 aa9.8□□□□□ -0.84
EPHA4-203ENST00000409938 TNPO1Q92973 898 aaKnown RBP9.8□□□□□ -0.84
EPHA4-203ENST00000409938 FBLN1P23142 703 aa9.8□□□□□ -0.84
EPHA4-203ENST00000409938 MRE11P49959 708 aa9.8□□□□□ -0.84
EPHA4-203ENST00000409938 PANK2Q9BZ23 570 aa9.8□□□□□ -0.84
EPHA4-203ENST00000409938 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.8□□□□□ -0.84
EPHA4-203ENST00000409938 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
EPHA4-203ENST00000409938 WAPLQ7Z5K2 1190 aa9.79□□□□□ -0.84
EPHA4-203ENST00000409938 THUMPD2Q9BTF0 503 aaKnown RBP9.79□□□□□ -0.84
EPHA4-203ENST00000409938 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
EPHA4-203ENST00000409938 FMN2Q9NZ56 1722 aa9.79□□□□□ -0.84
EPHA4-203ENST00000409938 INTS3Q68E01 1043 aaKnown RBP9.79□□□□□ -0.84
EPHA4-203ENST00000409938 C8orf58Q8NAV2 365 aa9.79□□□□□ -0.84
EPHA4-203ENST00000409938 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-203ENST00000409938 DCTPP1Q9H773 170 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 METP08581 1390 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-203ENST00000409938 TWISTNBQ3B726 338 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-203ENST00000409938 ANKRD45Q5TZF3 282 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 IBTKQ9P2D0 1353 aaPredicted RBP9.78□□□□□ -0.84
EPHA4-203ENST00000409938 HMOX1P09601 288 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 CLCN1P35523 988 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 OVOS2A0A0J9YW53 1432 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 OVOS2Q6IE36 1432 aa9.78□□□□□ -0.84
EPHA4-203ENST00000409938 KIAA0232Q92628 1395 aa9.77□□□□□ -0.84
EPHA4-203ENST00000409938 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.84
EPHA4-203ENST00000409938 LMOD3Q0VAK6 560 aa9.77□□□□□ -0.84
EPHA4-203ENST00000409938 NME9Q86XW9 330 aa9.77□□□□□ -0.84
EPHA4-203ENST00000409938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.84
EPHA4-203ENST00000409938 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.84
EPHA4-203ENST00000409938 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.84
EPHA4-203ENST00000409938 UBR1Q8IWV7 1749 aa9.77□□□□□ -0.85
EPHA4-203ENST00000409938 GRPEL1Q9HAV7 217 aa9.77□□□□□ -0.85
EPHA4-203ENST00000409938 CDC45O75419 566 aa9.76□□□□□ -0.85
EPHA4-203ENST00000409938 PTMSP20962 102 aa9.76□□□□□ -0.85
EPHA4-203ENST00000409938 ZRANB1Q9UGI0 708 aa9.76□□□□□ -0.85
EPHA4-203ENST00000409938 CRB1P82279 1406 aa9.76□□□□□ -0.85
EPHA4-203ENST00000409938 CYP2E1P05181 493 aaPredicted RBP9.76□□□□□ -0.85
EPHA4-203ENST00000409938 PRKCSHP14314 528 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 SKOR2Q2VWA4 1001 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 GAS2L3Q86XJ1 694 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 ANKRD44Q8N8A2 993 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 GAS2L2Q8NHY3 880 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 GZF1Q9H116 711 aaPredicted RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 CHL1O00533 1208 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 GBP4Q96PP9 640 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 USP54Q70EL1 1684 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 RIMS1Q86UR5 1692 aaKnown RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 FAM208AQ9UK61 1670 aaKnown RBP9.75□□□□□ -0.85
EPHA4-203ENST00000409938 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
EPHA4-203ENST00000409938 RTL1A6NKG5 1358 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms