RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
PCDHAC1-202ENST00000409700 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
PCDHAC1-202ENST00000409700 PUS7Q96PZ0 661 aaKnown RBP13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 ERC2O15083 957 aa13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 VAMP4O75379 141 aa13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 RPAP2Q8IXW5 612 aaPredicted RBP13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 POLKQ9UBT6 870 aa13.25□□□□□ -0.29
PCDHAC1-202ENST00000409700 NUDT16Q96DE0 195 aaKnown RBP13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 SNX21Q969T3 373 aa13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 FGD1P98174 961 aa13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
PCDHAC1-202ENST00000409700 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 PHF14O94880 888 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 ABCC1P33527 1531 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
PCDHAC1-202ENST00000409700 ZBTB7BO15156 539 aaPredicted RBP13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 BAG4O95429 457 aaKnown RBP13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 GAS2L2Q8NHY3 880 aa13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 GNAI2P04899 355 aa13.22□□□□□ -0.29
PCDHAC1-202ENST00000409700 E9PCH4 1651 aa13.21□□□□□ -0.29
PCDHAC1-202ENST00000409700 RBM25P49756 843 aaKnown RBP13.21□□□□□ -0.29
PCDHAC1-202ENST00000409700 NUTM2GQ5VZR2 741 aa13.21□□□□□ -0.29
PCDHAC1-202ENST00000409700 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.21□□□□□ -0.29
PCDHAC1-202ENST00000409700 F6X3S4 739 aa13.21□□□□□ -0.29
PCDHAC1-202ENST00000409700 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.3
PCDHAC1-202ENST00000409700 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 GNAI3P08754 354 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 CLCN1P35523 988 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 CLTCL1P53675 1640 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 TTC22Q5TAA0 569 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 DRC7Q8IY82 874 aa13.2□□□□□ -0.3
PCDHAC1-202ENST00000409700 WASLO00401 505 aaPredicted RBP13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 NPATQ14207 1427 aa13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 KRT24Q2M2I5 525 aa13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 LAMC1P11047 1609 aa13.19□□□□□ -0.3
PCDHAC1-202ENST00000409700 MBD3O95983 291 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 DIAPH3Q9NSV4 1193 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 MYOM2P54296 1465 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 SDSP20132 328 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 MPNDQ8N594 471 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 MCM2P49736 904 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 ZSCAN30Q86W11 494 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 MEIS3Q99687 375 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 TAOK2Q9UL54 1235 aa13.18□□□□□ -0.3
PCDHAC1-202ENST00000409700 SYCE3A1L190 88 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 NLRP6P59044 892 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
PCDHAC1-202ENST00000409700 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 PLEKHM2Q8IWE5 1019 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 ZMYM3Q14202 1370 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 RBM10P98175 930 aaKnown RBP13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 TEFQ10587 303 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 SMC3Q9UQE7 1217 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
PCDHAC1-202ENST00000409700 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 VPS37CA5D8V6 355 aaPredicted RBP13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 TPM2P07951 284 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 DCTPP1Q9H773 170 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 C9orf78Q9NZ63 289 aaPredicted RBP13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 ZFYVE16Q7Z3T8 1539 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
PCDHAC1-202ENST00000409700 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
PCDHAC1-202ENST00000409700 CCDC39Q9UFE4 941 aa13.14□□□□□ -0.31
PCDHAC1-202ENST00000409700 SLC26A8Q96RN1 970 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms