RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
POLR1A-203ENST00000409681 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
POLR1A-203ENST00000409681 FMNL2Q96PY5 1086 aa12.43□□□□□ -0.42
POLR1A-203ENST00000409681 A0A087WZG4 1122 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 MYL6BP14649 208 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 DISP3Q9P2K9 1392 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
POLR1A-203ENST00000409681 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 AK7Q96M32 723 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
POLR1A-203ENST00000409681 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
POLR1A-203ENST00000409681 LTKP29376 864 aa12.41□□□□□ -0.42
POLR1A-203ENST00000409681 CTDP1Q9Y5B0 961 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-203ENST00000409681 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
POLR1A-203ENST00000409681 GCP02774 474 aa12.41□□□□□ -0.42
POLR1A-203ENST00000409681 IL2RBP14784 551 aa12.41□□□□□ -0.42
POLR1A-203ENST00000409681 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
POLR1A-203ENST00000409681 HTATSF1O43719 755 aaKnown RBP12.4□□□□□ -0.42
POLR1A-203ENST00000409681 FLT4P35916 1363 aa12.4□□□□□ -0.42
POLR1A-203ENST00000409681 FYB1O15117 783 aa12.4□□□□□ -0.43
POLR1A-203ENST00000409681 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.43
POLR1A-203ENST00000409681 GNAI2P04899 355 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
POLR1A-203ENST00000409681 TBC1D2BQ9UPU7 963 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 PLIN1O60240 522 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 ADCY10Q96PN6 1610 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 CRBNQ96SW2 442 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
POLR1A-203ENST00000409681 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
POLR1A-203ENST00000409681 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
POLR1A-203ENST00000409681 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-203ENST00000409681 APPP05067 770 aa12.38□□□□□ -0.43
POLR1A-203ENST00000409681 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
POLR1A-203ENST00000409681 LARP1Q6PKG0 1096 aaKnown RBP12.38□□□□□ -0.43
POLR1A-203ENST00000409681 PIK3R4Q99570 1358 aa12.38□□□□□ -0.43
POLR1A-203ENST00000409681 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
POLR1A-203ENST00000409681 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
POLR1A-203ENST00000409681 MCM10Q7L590 875 aa12.37□□□□□ -0.43
POLR1A-203ENST00000409681 TMEM94Q12767 1356 aa12.37□□□□□ -0.43
POLR1A-203ENST00000409681 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
POLR1A-203ENST00000409681 TRDNQ13061 729 aa12.37□□□□□ -0.43
POLR1A-203ENST00000409681 TULP1O00294 542 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 CCDC34Q96HJ3 373 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 ZKSCAN1P17029 563 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 HYPKQ9NX55 129 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 BTG4Q9NY30 223 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 CCDC158Q5M9N0 1113 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 RNF20Q5VTR2 975 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 REC8O95072 547 aa12.36□□□□□ -0.43
POLR1A-203ENST00000409681 AKAP17AQ02040 695 aaKnown RBP12.36□□□□□ -0.43
POLR1A-203ENST00000409681 IP6K1Q92551 441 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 ABCA9Q8IUA7 1624 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 PDE3AQ14432 1141 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 ARHGAP31Q2M1Z3 1444 aa12.35□□□□□ -0.43
POLR1A-203ENST00000409681 ST18O60284 1047 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 DBF4Q9UBU7 674 aaPredicted RBP12.34□□□□□ -0.43
POLR1A-203ENST00000409681 HSP90AB2PQ58FF8 381 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
POLR1A-203ENST00000409681 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
POLR1A-203ENST00000409681 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
POLR1A-203ENST00000409681 RFC4P35249 363 aa12.34□□□□□ -0.43
POLR1A-203ENST00000409681 NOB1Q9ULX3 412 aaKnown RBP12.34□□□□□ -0.43
POLR1A-203ENST00000409681 EXOC6Q8TAG9 804 aa12.33□□□□□ -0.43
POLR1A-203ENST00000409681 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.43
POLR1A-203ENST00000409681 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
POLR1A-203ENST00000409681 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
POLR1A-203ENST00000409681 WASHC4Q2M389 1173 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 ERICH2A1L162 156 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 USP21Q9UK80 565 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 ABCC3O15438 1527 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 HIP1O00291 1037 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 TTC39AQ5SRH9 613 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
POLR1A-203ENST00000409681 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.31□□□□□ -0.446e-7■■■■□ 19.6
POLR1A-203ENST00000409681 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
POLR1A-203ENST00000409681 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
POLR1A-203ENST00000409681 MARCH6O60337 910 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 ALDH1L2Q3SY69 923 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 RPGRQ92834 1020 aaKnown RBP12.31□□□□□ -0.44
POLR1A-203ENST00000409681 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 KDM5CP41229 1560 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms