RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PTMSP20962 102 aa13.49□□□□□ -0.25
NIF3L1-204ENST00000409357 NBPF1Q3BBV0 1214 aa13.49□□□□□ -0.25
NIF3L1-204ENST00000409357 POTEAQ6S8J7 498 aa13.49□□□□□ -0.25
NIF3L1-204ENST00000409357 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
NIF3L1-204ENST00000409357 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
NIF3L1-204ENST00000409357 SOCS7O14512 581 aa13.48□□□□□ -0.25
NIF3L1-204ENST00000409357 FOXO3O43524 673 aa13.48□□□□□ -0.25
NIF3L1-204ENST00000409357 UTP14CQ5TAP6 766 aaKnown RBP13.48□□□□□ -0.25
NIF3L1-204ENST00000409357 OFD1O75665 1012 aa13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 STAC3Q96MF2 364 aa13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
NIF3L1-204ENST00000409357 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-204ENST00000409357 NINLQ9Y2I6 1382 aa13.46□□□□□ -0.25
NIF3L1-204ENST00000409357 DDX11L8A8MPP1 907 aa13.46□□□□□ -0.26
NIF3L1-204ENST00000409357 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.26
NIF3L1-204ENST00000409357 HS1BP3Q53T59 392 aa13.45□□□□□ -0.26
NIF3L1-204ENST00000409357 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.45□□□□□ -0.26
NIF3L1-204ENST00000409357 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
NIF3L1-204ENST00000409357 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
NIF3L1-204ENST00000409357 MEX3CQ5U5Q3 659 aaKnown RBP13.44□□□□□ -0.26
NIF3L1-204ENST00000409357 PPP1R9BQ96SB3 815 aa13.44□□□□□ -0.26
NIF3L1-204ENST00000409357 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
NIF3L1-204ENST00000409357 TRAK2O60296 914 aa13.44□□□□□ -0.26
NIF3L1-204ENST00000409357 TRIM44Q96DX7 344 aaPredicted RBP13.44□□□□□ -0.26
NIF3L1-204ENST00000409357 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
NIF3L1-204ENST00000409357 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
NIF3L1-204ENST00000409357 TBC1D32Q96NH3 1257 aa13.43□□□□□ -0.26
NIF3L1-204ENST00000409357 PANK2Q9BZ23 570 aa13.43□□□□□ -0.26
NIF3L1-204ENST00000409357 PLIN1O60240 522 aa13.42□□□□□ -0.26
NIF3L1-204ENST00000409357 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
NIF3L1-204ENST00000409357 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
NIF3L1-204ENST00000409357 ATP7BP35670 1465 aa13.42□□□□□ -0.26
NIF3L1-204ENST00000409357 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 ERBB4Q15303 1308 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 ZNF521Q96K83 1311 aa13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 TRPM3Q9HCF6 1732 aaPredicted RBP13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
NIF3L1-204ENST00000409357 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 KIAA1211Q6ZU35 1233 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 ZSCAN30Q86W11 494 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 TOPAZ1Q8N9V7 1692 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 ABCA3Q99758 1704 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 AFF2P51816 1311 aa13.4□□□□□ -0.26
NIF3L1-204ENST00000409357 EP400Q96L91 3159 aa13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 DUSP27Q5VZP5 1158 aa13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
NIF3L1-204ENST00000409357 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 SPATA31A3Q5VYP0 1347 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 RIPK4P57078 832 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 C20orf194Q5TEA3 1177 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 KRT28Q7Z3Y7 464 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 TNS3Q68CZ2 1445 aa13.38□□□□□ -0.27
NIF3L1-204ENST00000409357 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
NIF3L1-204ENST00000409357 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
NIF3L1-204ENST00000409357 DYNC1I1O14576 645 aa13.37□□□□□ -0.27
NIF3L1-204ENST00000409357 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
NIF3L1-204ENST00000409357 ZNF500O60304 480 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 MCM5P33992 734 aa13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 PDE4CQ08493 712 aa13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 ZNF772Q68DY9 489 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 SLKQ9H2G2 1235 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
NIF3L1-204ENST00000409357 DDIT3P35638 169 aa13.34□□□□□ -0.27
NIF3L1-204ENST00000409357 RGS3P49796 1198 aa13.34□□□□□ -0.27
NIF3L1-204ENST00000409357 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
NIF3L1-204ENST00000409357 NGLY1Q96IV0 654 aa13.34□□□□□ -0.27
NIF3L1-204ENST00000409357 PSME1Q06323 249 aa13.34□□□□□ -0.27
NIF3L1-204ENST00000409357 SBNO1A3KN83 1393 aa13.33□□□□□ -0.28
NIF3L1-204ENST00000409357 DMTNQ08495 405 aa13.33□□□□□ -0.28
NIF3L1-204ENST00000409357 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
NIF3L1-204ENST00000409357 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
NIF3L1-204ENST00000409357 KIF20AO95235 890 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 GTPBP4Q9BZE4 634 aaKnown RBP13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 BCL9LQ86UU0 1499 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
NIF3L1-204ENST00000409357 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 CLEC17AQ6ZS10 378 aa13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 CABP2Q9NPB3 220 aa13.31□□□□□ -0.28
NIF3L1-204ENST00000409357 SEC24BO95487 1268 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms