RNA–Protein interactions for RNA: ENST00000406569.7

PMS2-204, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS2, Length 1,719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-204ENST00000406569 WAPLQ7Z5K2 1190 aa17.2■□□□□ 0.34
PMS2-204ENST00000406569 ZBTB7BO15156 539 aaPredicted RBP17.19■□□□□ 0.34
PMS2-204ENST00000406569 RBM25P49756 843 aaKnown RBP17.19■□□□□ 0.34
PMS2-204ENST00000406569 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
PMS2-204ENST00000406569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
PMS2-204ENST00000406569 ABCC4O15439 1325 aa17.18■□□□□ 0.34
PMS2-204ENST00000406569 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
PMS2-204ENST00000406569 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
PMS2-204ENST00000406569 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
PMS2-204ENST00000406569 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.18■□□□□ 0.34
PMS2-204ENST00000406569 TSPOAP1O95153 1857 aa17.17■□□□□ 0.34
PMS2-204ENST00000406569 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
PMS2-204ENST00000406569 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
PMS2-204ENST00000406569 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
PMS2-204ENST00000406569 LMOD3Q0VAK6 560 aa17.16■□□□□ 0.34
PMS2-204ENST00000406569 SNX21Q969T3 373 aa17.16■□□□□ 0.34
PMS2-204ENST00000406569 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
PMS2-204ENST00000406569 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
PMS2-204ENST00000406569 TOPAZ1Q8N9V7 1692 aa17.15■□□□□ 0.34
PMS2-204ENST00000406569 METP08581 1390 aa17.15■□□□□ 0.34
PMS2-204ENST00000406569 FBLN1P23142 703 aa17.14■□□□□ 0.33
PMS2-204ENST00000406569 NME9Q86XW9 330 aa17.14■□□□□ 0.33
PMS2-204ENST00000406569 CFAP44Q96MT7 982 aa17.14■□□□□ 0.33
PMS2-204ENST00000406569 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
PMS2-204ENST00000406569 MBIPQ9NS73 344 aa17.14■□□□□ 0.33
PMS2-204ENST00000406569 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
PMS2-204ENST00000406569 HMOX1P09601 288 aa17.13■□□□□ 0.33
PMS2-204ENST00000406569 DDIT3P35638 169 aa17.13■□□□□ 0.33
PMS2-204ENST00000406569 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
PMS2-204ENST00000406569 MCM4P33991 863 aa17.13■□□□□ 0.33
PMS2-204ENST00000406569 FAM69CQ0P6D2 419 aa17.13■□□□□ 0.33
PMS2-204ENST00000406569 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
PMS2-204ENST00000406569 LNPKQ9C0E8 428 aa17.12■□□□□ 0.33
PMS2-204ENST00000406569 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
PMS2-204ENST00000406569 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
PMS2-204ENST00000406569 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
PMS2-204ENST00000406569 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
PMS2-204ENST00000406569 L1TD1Q5T7N2 865 aaKnown RBP17.1■□□□□ 0.33
PMS2-204ENST00000406569 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
PMS2-204ENST00000406569 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
PMS2-204ENST00000406569 COG3Q96JB2 828 aa17.1■□□□□ 0.33
PMS2-204ENST00000406569 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
PMS2-204ENST00000406569 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
PMS2-204ENST00000406569 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
PMS2-204ENST00000406569 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
PMS2-204ENST00000406569 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
PMS2-204ENST00000406569 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
PMS2-204ENST00000406569 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
PMS2-204ENST00000406569 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 ANKRD45Q5TZF3 282 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
PMS2-204ENST00000406569 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
PMS2-204ENST00000406569 HDGFP51858 240 aaKnown RBP17.07■□□□□ 0.32
PMS2-204ENST00000406569 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 KIF2CQ99661 725 aa17.07■□□□□ 0.32
PMS2-204ENST00000406569 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
PMS2-204ENST00000406569 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
PMS2-204ENST00000406569 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
PMS2-204ENST00000406569 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
PMS2-204ENST00000406569 RGS12O14924 1447 aa17.06■□□□□ 0.32
PMS2-204ENST00000406569 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
PMS2-204ENST00000406569 HAP1P54257 671 aaPredicted RBP17.04■□□□□ 0.32
PMS2-204ENST00000406569 ADAMTS13Q76LX8 1427 aa17.04■□□□□ 0.32
PMS2-204ENST00000406569 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
PMS2-204ENST00000406569 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
PMS2-204ENST00000406569 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
PMS2-204ENST00000406569 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
PMS2-204ENST00000406569 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
PMS2-204ENST00000406569 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
PMS2-204ENST00000406569 C1orf115Q9H7X2 142 aa17.03■□□□□ 0.32
PMS2-204ENST00000406569 ATP10DQ9P241 1426 aa17.03■□□□□ 0.32
PMS2-204ENST00000406569 TNRQ92752 1358 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 FMN2Q9NZ56 1722 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 CHL1O00533 1208 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 TTC21BQ7Z4L5 1316 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.32
PMS2-204ENST00000406569 SSH2Q76I76 1423 aa17.02■□□□□ 0.31
PMS2-204ENST00000406569 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
PMS2-204ENST00000406569 SPRYD3Q8NCJ5 442 aa17.01■□□□□ 0.31
PMS2-204ENST00000406569 FAM83GA6ND36 823 aa17.01■□□□□ 0.31
PMS2-204ENST00000406569 TRAK2O60296 914 aa17.01■□□□□ 0.31
PMS2-204ENST00000406569 CDC45O75419 566 aa17.01■□□□□ 0.31
PMS2-204ENST00000406569 USP6P35125 1406 aa17■□□□□ 0.31
PMS2-204ENST00000406569 ELL2O00472 640 aaPredicted RBP17■□□□□ 0.31
PMS2-204ENST00000406569 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
PMS2-204ENST00000406569 PLEKHM2Q8IWE5 1019 aa16.99■□□□□ 0.31
PMS2-204ENST00000406569 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
PMS2-204ENST00000406569 PLEKHG1Q9ULL1 1385 aa16.99■□□□□ 0.31
PMS2-204ENST00000406569 CRB1P82279 1406 aa16.99■□□□□ 0.31
PMS2-204ENST00000406569 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
PMS2-204ENST00000406569 RPAP2Q8IXW5 612 aaPredicted RBP16.99■□□□□ 0.31
PMS2-204ENST00000406569 PTPRCP08575 1304 aa16.98■□□□□ 0.31
PMS2-204ENST00000406569 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
PMS2-204ENST00000406569 ARHGEF10O15013 1369 aa16.98■□□□□ 0.31
PMS2-204ENST00000406569 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms