RNA–Protein interactions for RNA: ENST00000405742.7

TCN2-202, Transcript of transcobalamin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCN2, Length 1,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-202ENST00000405742 FAM161AQ3B820 660 aa18.21■□□□□ 0.51
TCN2-202ENST00000405742 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
TCN2-202ENST00000405742 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
TCN2-202ENST00000405742 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
TCN2-202ENST00000405742 RGS3P49796 1198 aa18.2■□□□□ 0.5
TCN2-202ENST00000405742 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
TCN2-202ENST00000405742 ZNF428Q96B54 188 aa18.2■□□□□ 0.5
TCN2-202ENST00000405742 SSH2Q76I76 1423 aa18.2■□□□□ 0.5
TCN2-202ENST00000405742 KIF16BQ96L93 1317 aa18.2■□□□□ 0.5
TCN2-202ENST00000405742 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
TCN2-202ENST00000405742 ALDH1L2Q3SY69 923 aa18.19■□□□□ 0.5
TCN2-202ENST00000405742 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
TCN2-202ENST00000405742 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
TCN2-202ENST00000405742 USP31Q70CQ4 1352 aa18.19■□□□□ 0.5
TCN2-202ENST00000405742 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
TCN2-202ENST00000405742 ATF7IPQ6VMQ6 1270 aa18.18■□□□□ 0.5
TCN2-202ENST00000405742 RGPD8O14715 1765 aaPredicted RBP18.18■□□□□ 0.5
TCN2-202ENST00000405742 GNAI1P63096 354 aa18.17■□□□□ 0.5
TCN2-202ENST00000405742 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
TCN2-202ENST00000405742 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
TCN2-202ENST00000405742 TRIM27P14373 513 aa18.17■□□□□ 0.5
TCN2-202ENST00000405742 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
TCN2-202ENST00000405742 PCDHB15Q9Y5E8 787 aa18.17■□□□□ 0.5
TCN2-202ENST00000405742 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
TCN2-202ENST00000405742 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
TCN2-202ENST00000405742 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
TCN2-202ENST00000405742 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
TCN2-202ENST00000405742 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
TCN2-202ENST00000405742 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
TCN2-202ENST00000405742 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
TCN2-202ENST00000405742 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
TCN2-202ENST00000405742 FMN2Q9NZ56 1722 aa18.15■□□□□ 0.5
TCN2-202ENST00000405742 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
TCN2-202ENST00000405742 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
TCN2-202ENST00000405742 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
TCN2-202ENST00000405742 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
TCN2-202ENST00000405742 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
TCN2-202ENST00000405742 NGDNQ8NEJ9 315 aaKnown RBP18.12■□□□□ 0.49
TCN2-202ENST00000405742 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
TCN2-202ENST00000405742 ITPRIPQ8IWB1 547 aa18.11■□□□□ 0.49
TCN2-202ENST00000405742 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
TCN2-202ENST00000405742 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
TCN2-202ENST00000405742 KCNA6P17658 529 aa18.1■□□□□ 0.49
TCN2-202ENST00000405742 SULT6B1Q6IMI4 303 aa18.1■□□□□ 0.49
TCN2-202ENST00000405742 MBIPQ9NS73 344 aa18.1■□□□□ 0.49
TCN2-202ENST00000405742 CHD2O14647 1828 aaKnown RBP18.1■□□□□ 0.49
TCN2-202ENST00000405742 VAMP4O75379 141 aa18.1■□□□□ 0.49
TCN2-202ENST00000405742 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
TCN2-202ENST00000405742 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
TCN2-202ENST00000405742 SBNO1A3KN83 1393 aa18.09■□□□□ 0.49
TCN2-202ENST00000405742 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
TCN2-202ENST00000405742 HSP90AB2PQ58FF8 381 aa18.08■□□□□ 0.49
TCN2-202ENST00000405742 FLT4P35916 1363 aa18.08■□□□□ 0.49
TCN2-202ENST00000405742 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.48
TCN2-202ENST00000405742 AEBP1Q8IUX7 1158 aa18.08■□□□□ 0.48
TCN2-202ENST00000405742 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
TCN2-202ENST00000405742 PDZRN3Q9UPQ7 1066 aa18.08■□□□□ 0.48
TCN2-202ENST00000405742 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
TCN2-202ENST00000405742 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
TCN2-202ENST00000405742 ADAMTSL3P82987 1691 aa18.06■□□□□ 0.48
TCN2-202ENST00000405742 TWISTNBQ3B726 338 aaPredicted RBP18.06■□□□□ 0.48
TCN2-202ENST00000405742 ANKLE2Q86XL3 938 aa18.06■□□□□ 0.48
TCN2-202ENST00000405742 FAM83GA6ND36 823 aa18.06■□□□□ 0.48
TCN2-202ENST00000405742 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
TCN2-202ENST00000405742 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
TCN2-202ENST00000405742 SOX12O15370 315 aa18.05■□□□□ 0.48
TCN2-202ENST00000405742 TSPYL6Q8N831 410 aa18.05■□□□□ 0.48
TCN2-202ENST00000405742 MARF1Q9Y4F3 1742 aaKnown RBP18.04■□□□□ 0.48
TCN2-202ENST00000405742 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
TCN2-202ENST00000405742 HAP1P54257 671 aaPredicted RBP18.03■□□□□ 0.48
TCN2-202ENST00000405742 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
TCN2-202ENST00000405742 SETD1BQ9UPS6 1966 aaKnown RBP18.03■□□□□ 0.48
TCN2-202ENST00000405742 KDRP35968 1356 aa18.02■□□□□ 0.48
TCN2-202ENST00000405742 AMPHP49418 695 aa18.02■□□□□ 0.47
TCN2-202ENST00000405742 C8orf58Q8NAV2 365 aa18.02■□□□□ 0.47
TCN2-202ENST00000405742 ELL2O00472 640 aaPredicted RBP18.01■□□□□ 0.47
TCN2-202ENST00000405742 NLRP6P59044 892 aa18.01■□□□□ 0.47
TCN2-202ENST00000405742 ABCC4O15439 1325 aa18■□□□□ 0.47
TCN2-202ENST00000405742 SMC5Q8IY18 1101 aa18■□□□□ 0.47
TCN2-202ENST00000405742 API5Q9BZZ5 524 aaKnown RBP18■□□□□ 0.47
TCN2-202ENST00000405742 IGSF1Q8N6C5 1336 aa17.99■□□□□ 0.47
TCN2-202ENST00000405742 CHL1O00533 1208 aa17.99■□□□□ 0.47
TCN2-202ENST00000405742 KIAA0232Q92628 1395 aa17.99■□□□□ 0.47
TCN2-202ENST00000405742 MCM10Q7L590 875 aa17.98■□□□□ 0.47
TCN2-202ENST00000405742 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
TCN2-202ENST00000405742 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
TCN2-202ENST00000405742 ADGRL3Q9HAR2 1447 aa17.97■□□□□ 0.47
TCN2-202ENST00000405742 ABTB2Q8N961 1025 aa17.96■□□□□ 0.47
TCN2-202ENST00000405742 EYA1Q99502 592 aa17.96■□□□□ 0.47
TCN2-202ENST00000405742 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
TCN2-202ENST00000405742 CRB1P82279 1406 aa17.96■□□□□ 0.47
TCN2-202ENST00000405742 GAS2L2Q8NHY3 880 aa17.96■□□□□ 0.47
TCN2-202ENST00000405742 HOXC9P31274 260 aa17.95■□□□□ 0.46
TCN2-202ENST00000405742 NBR1Q14596 966 aa17.95■□□□□ 0.46
TCN2-202ENST00000405742 MTHFSDQ2M296 383 aaKnown RBP17.95■□□□□ 0.46
TCN2-202ENST00000405742 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
TCN2-202ENST00000405742 RTL1A6NKG5 1358 aa17.95■□□□□ 0.46
TCN2-202ENST00000405742 NPHP4O75161 1426 aaPredicted RBP17.94■□□□□ 0.46
TCN2-202ENST00000405742 USP19O94966 1318 aa17.94■□□□□ 0.46
TCN2-202ENST00000405742 LTN1O94822 1766 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms