RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TMEM94Q12767 1356 aa25.12■■□□□ 1.61
CCDC47-202ENST00000403162 COL3A1P02461 1466 aaPredicted RBP25.11■■□□□ 1.61
CCDC47-202ENST00000403162 CDC42BPGQ6DT37 1551 aa25.11■■□□□ 1.61
CCDC47-202ENST00000403162 ANKRD26Q9UPS8 1709 aa25.1■■□□□ 1.61
CCDC47-202ENST00000403162 PLEKHF1Q96S99 279 aa25.1■■□□□ 1.61
CCDC47-202ENST00000403162 A0A1W2PP64 1363 aa25.1■■□□□ 1.61
CCDC47-202ENST00000403162 HDAC1Q13547 482 aaPredicted RBP25.1■■□□□ 1.61
CCDC47-202ENST00000403162 HDGFL2Q7Z4V5 671 aaPredicted RBP25.1■■□□□ 1.61
CCDC47-202ENST00000403162 IL16Q14005 1332 aa25.08■■□□□ 1.61
CCDC47-202ENST00000403162 FMN2Q9NZ56 1722 aa25.08■■□□□ 1.61
CCDC47-202ENST00000403162 CD163L1Q9NR16 1453 aa25.08■■□□□ 1.61
CCDC47-202ENST00000403162 SMC4Q9NTJ3 1288 aa25.07■■□□□ 1.6
CCDC47-202ENST00000403162 TSR2Q969E8 191 aaKnown RBP25.07■■□□□ 1.6
CCDC47-202ENST00000403162 C19orf44Q9H6X5 657 aa25.07■■□□□ 1.6
CCDC47-202ENST00000403162 ANKARQ7Z5J8 1434 aa25.06■■□□□ 1.6
CCDC47-202ENST00000403162 TRIM27P14373 513 aa25.06■■□□□ 1.6
CCDC47-202ENST00000403162 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
CCDC47-202ENST00000403162 DDX19BQ9UMR2 479 aa25.06■■□□□ 1.6
CCDC47-202ENST00000403162 EXOSC9Q06265 439 aaKnown RBP25.05■■□□□ 1.6
CCDC47-202ENST00000403162 FAM43AQ8N2R8 423 aa25.05■■□□□ 1.6
CCDC47-202ENST00000403162 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
CCDC47-202ENST00000403162 TRIM35Q9UPQ4 493 aa25.05■■□□□ 1.6
CCDC47-202ENST00000403162 TOPAZ1Q8N9V7 1692 aa25.05■■□□□ 1.6
CCDC47-202ENST00000403162 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
CCDC47-202ENST00000403162 LRRC7Q96NW7 1537 aa25.03■■□□□ 1.6
CCDC47-202ENST00000403162 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
CCDC47-202ENST00000403162 PLEKHG3A1L390 1219 aa25.03■■□□□ 1.6
CCDC47-202ENST00000403162 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
CCDC47-202ENST00000403162 L1TD1Q5T7N2 865 aaKnown RBP25.02■■□□□ 1.6
CCDC47-202ENST00000403162 ITSN1Q15811 1721 aa25.01■■□□□ 1.59
CCDC47-202ENST00000403162 SMC5Q8IY18 1101 aa25.01■■□□□ 1.59
CCDC47-202ENST00000403162 C22orf23Q9BZE7 217 aa25.01■■□□□ 1.59
CCDC47-202ENST00000403162 CPSF1Q10570 1443 aaKnown RBP25.01■■□□□ 1.59
CCDC47-202ENST00000403162 ATF3P18847 181 aa25.01■■□□□ 1.59
CCDC47-202ENST00000403162 ACEP12821 1306 aa25.01■■□□□ 1.59
CCDC47-202ENST00000403162 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
CCDC47-202ENST00000403162 ITPRIPQ8IWB1 547 aa25■■□□□ 1.59
CCDC47-202ENST00000403162 MSH6P52701 1360 aa24.99■■□□□ 1.59
CCDC47-202ENST00000403162 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
CCDC47-202ENST00000403162 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
CCDC47-202ENST00000403162 XIRP1Q702N8 1843 aaKnown RBP24.98■■□□□ 1.59
CCDC47-202ENST00000403162 GGNBP2Q9H3C7 697 aa24.97■■□□□ 1.59
CCDC47-202ENST00000403162 KIF16BQ96L93 1317 aa24.97■■□□□ 1.59
CCDC47-202ENST00000403162 ESCO1Q5FWF5 840 aa24.97■■□□□ 1.59
CCDC47-202ENST00000403162 NOB1Q9ULX3 412 aaKnown RBP24.97■■□□□ 1.59
CCDC47-202ENST00000403162 DCCP43146 1447 aa24.96■■□□□ 1.59
CCDC47-202ENST00000403162 ZBTB40Q9NUA8 1239 aa24.96■■□□□ 1.59
CCDC47-202ENST00000403162 MFAP1P55081 439 aaKnown RBP24.95■■□□□ 1.59
CCDC47-202ENST00000403162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.95■■□□□ 1.59
CCDC47-202ENST00000403162 CHMP5Q9NZZ3 219 aa24.95■■□□□ 1.59
CCDC47-202ENST00000403162 PNPLA6Q8IY17 1366 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 FYB1O15117 783 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 MCM4P33991 863 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 CADPS2Q86UW7 1296 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 PNNQ9H307 717 aaKnown RBP24.95■■□□□ 1.58
CCDC47-202ENST00000403162 PHF8Q9UPP1 1060 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 AKAP12Q02952 1782 aa24.95■■□□□ 1.58
CCDC47-202ENST00000403162 EDC4Q6P2E9 1401 aaKnown RBP24.94■■□□□ 1.58
CCDC47-202ENST00000403162 IPO8O15397 1037 aaKnown RBP24.94■■□□□ 1.58
CCDC47-202ENST00000403162 TMEM57Q8N5G2 664 aa24.94■■□□□ 1.58
CCDC47-202ENST00000403162 MON2Q7Z3U7 1717 aa24.93■■□□□ 1.58
CCDC47-202ENST00000403162 RIPK4P57078 832 aa24.93■■□□□ 1.58
CCDC47-202ENST00000403162 ALDH1L2Q3SY69 923 aa24.93■■□□□ 1.58
CCDC47-202ENST00000403162 KIF20BQ96Q89 1820 aa24.92■■□□□ 1.58
CCDC47-202ENST00000403162 C1orf167Q5SNV9 1468 aa24.92■■□□□ 1.58
CCDC47-202ENST00000403162 ORAI2Q96SN7 254 aa24.92■■□□□ 1.58
CCDC47-202ENST00000403162 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.92■■□□□ 1.58
CCDC47-202ENST00000403162 USP6P35125 1406 aa24.91■■□□□ 1.58
CCDC47-202ENST00000403162 DIAPH1O60610 1272 aaKnown RBP24.91■■□□□ 1.58
CCDC47-202ENST00000403162 MST1RQ04912 1400 aa24.9■■□□□ 1.58
CCDC47-202ENST00000403162 NUCB1Q02818 461 aa24.9■■□□□ 1.58
CCDC47-202ENST00000403162 FSD2A1L4K1 749 aa24.89■■□□□ 1.58
CCDC47-202ENST00000403162 BRPF1P55201 1214 aaPredicted RBP24.88■■□□□ 1.57
CCDC47-202ENST00000403162 RBM25P49756 843 aaKnown RBP24.88■■□□□ 1.57
CCDC47-202ENST00000403162 SPRYD3Q8NCJ5 442 aa24.88■■□□□ 1.57
CCDC47-202ENST00000403162 ZNF428Q96B54 188 aa24.88■■□□□ 1.57
CCDC47-202ENST00000403162 HSCBQ8IWL3 235 aa24.87■■□□□ 1.57
CCDC47-202ENST00000403162 TTC21BQ7Z4L5 1316 aa24.87■■□□□ 1.57
CCDC47-202ENST00000403162 NME9Q86XW9 330 aa24.87■■□□□ 1.57
CCDC47-202ENST00000403162 FCHSD2O94868 740 aa24.86■■□□□ 1.57
CCDC47-202ENST00000403162 LTBP4Q8N2S1 1624 aa24.86■■□□□ 1.57
CCDC47-202ENST00000403162 GOLGA6L3A6NEY3 463 aa24.86■■□□□ 1.57
CCDC47-202ENST00000403162 NRKQ7Z2Y5 1582 aa24.85■■□□□ 1.57
CCDC47-202ENST00000403162 SNX21Q969T3 373 aa24.84■■□□□ 1.57
CCDC47-202ENST00000403162 PSME1Q06323 249 aa24.84■■□□□ 1.57
CCDC47-202ENST00000403162 RSPH6AQ9H0K4 717 aa24.84■■□□□ 1.57
CCDC47-202ENST00000403162 FOXO3O43524 673 aa24.83■■□□□ 1.57
CCDC47-202ENST00000403162 SSH2Q76I76 1423 aa24.83■■□□□ 1.57
CCDC47-202ENST00000403162 DDIT3P35638 169 aa24.83■■□□□ 1.56
CCDC47-202ENST00000403162 CHD1LQ86WJ1 897 aa24.83■■□□□ 1.56
CCDC47-202ENST00000403162 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.56
CCDC47-202ENST00000403162 XRCC6P12956 609 aaKnown RBP eCLIP24.81■■□□□ 1.56
CCDC47-202ENST00000403162 TTC21AQ8NDW8 1320 aa24.81■■□□□ 1.56
CCDC47-202ENST00000403162 DDX11L8A8MPP1 907 aa24.81■■□□□ 1.56
CCDC47-202ENST00000403162 TRAK2O60296 914 aa24.81■■□□□ 1.56
CCDC47-202ENST00000403162 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
CCDC47-202ENST00000403162 KIF1AQ12756 1690 aa24.81■■□□□ 1.56
CCDC47-202ENST00000403162 BMP2KLQ5H9B9 411 aa24.8■■□□□ 1.56
CCDC47-202ENST00000403162 CHMP4BQ9H444 224 aaKnown RBP24.8■■□□□ 1.56
CCDC47-202ENST00000403162 XPCQ01831 940 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms