RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 DDX19BQ9UMR2 479 aa21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 PDZRN3Q9UPQ7 1066 aa21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 AMOTL2Q9Y2J4 779 aa21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 SLIT1O75093 1534 aa21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 ARHGAP23Q9P227 1491 aa21.63■■□□□ 1.05
DNMT3A-205ENST00000402667 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
DNMT3A-205ENST00000402667 IPO8O15397 1037 aaKnown RBP21.62■■□□□ 1.05
DNMT3A-205ENST00000402667 TOPAZ1Q8N9V7 1692 aa21.62■■□□□ 1.05
DNMT3A-205ENST00000402667 ITPRIPQ8IWB1 547 aa21.62■■□□□ 1.05
DNMT3A-205ENST00000402667 TBX22Q9Y458 520 aa21.62■■□□□ 1.05
DNMT3A-205ENST00000402667 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
DNMT3A-205ENST00000402667 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
DNMT3A-205ENST00000402667 NRKQ7Z2Y5 1582 aa21.61■■□□□ 1.05
DNMT3A-205ENST00000402667 GNAI1P63096 354 aa21.6■■□□□ 1.05
DNMT3A-205ENST00000402667 TMEM57Q8N5G2 664 aa21.6■■□□□ 1.05
DNMT3A-205ENST00000402667 USP6P35125 1406 aa21.6■■□□□ 1.05
DNMT3A-205ENST00000402667 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
DNMT3A-205ENST00000402667 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
DNMT3A-205ENST00000402667 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
DNMT3A-205ENST00000402667 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
DNMT3A-205ENST00000402667 VAMP4O75379 141 aa21.58■■□□□ 1.05
DNMT3A-205ENST00000402667 LMOD3Q0VAK6 560 aa21.58■■□□□ 1.04
DNMT3A-205ENST00000402667 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.04
DNMT3A-205ENST00000402667 VIRMAQ69YN4 1812 aaKnown RBP21.58■■□□□ 1.04
DNMT3A-205ENST00000402667 EIF4A2Q14240 407 aaKnown RBP21.57■■□□□ 1.04
DNMT3A-205ENST00000402667 HDAC1Q13547 482 aaPredicted RBP21.57■■□□□ 1.04
DNMT3A-205ENST00000402667 MBIPQ9NS73 344 aa21.57■■□□□ 1.04
DNMT3A-205ENST00000402667 TSPYL6Q8N831 410 aa21.56■■□□□ 1.04
DNMT3A-205ENST00000402667 DLG5Q8TDM6 1919 aa21.56■■□□□ 1.04
DNMT3A-205ENST00000402667 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
DNMT3A-205ENST00000402667 ZBTB40Q9NUA8 1239 aa21.56■■□□□ 1.04
DNMT3A-205ENST00000402667 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
DNMT3A-205ENST00000402667 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
DNMT3A-205ENST00000402667 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
DNMT3A-205ENST00000402667 FAM83GA6ND36 823 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 SULT6B1Q6IMI4 303 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 AEBP1Q8IUX7 1158 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 USP19O94966 1318 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 SEC24BO95487 1268 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 USP31Q70CQ4 1352 aa21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
DNMT3A-205ENST00000402667 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
DNMT3A-205ENST00000402667 ELL2O00472 640 aaPredicted RBP21.52■■□□□ 1.04
DNMT3A-205ENST00000402667 DCTN1Q14203 1278 aa21.52■■□□□ 1.04
DNMT3A-205ENST00000402667 HSP90AB2PQ58FF8 381 aa21.52■■□□□ 1.04
DNMT3A-205ENST00000402667 NALCNQ8IZF0 1738 aa21.51■■□□□ 1.03
DNMT3A-205ENST00000402667 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
DNMT3A-205ENST00000402667 DAXXQ9UER7 740 aaPredicted RBP21.51■■□□□ 1.03
DNMT3A-205ENST00000402667 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
DNMT3A-205ENST00000402667 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
DNMT3A-205ENST00000402667 C8orf58Q8NAV2 365 aa21.5■■□□□ 1.03
DNMT3A-205ENST00000402667 DIP2AQ14689 1571 aa21.5■■□□□ 1.03
DNMT3A-205ENST00000402667 PEAK1Q9H792 1746 aa21.49■■□□□ 1.03
DNMT3A-205ENST00000402667 SOX12O15370 315 aa21.49■■□□□ 1.03
DNMT3A-205ENST00000402667 RTL5Q5HYW3 569 aaPredicted RBP21.49■■□□□ 1.03
DNMT3A-205ENST00000402667 SMC5Q8IY18 1101 aa21.49■■□□□ 1.03
DNMT3A-205ENST00000402667 NGDNQ8NEJ9 315 aaKnown RBP21.49■■□□□ 1.03
DNMT3A-205ENST00000402667 MAP3K19Q56UN5 1328 aa21.46■■□□□ 1.03
DNMT3A-205ENST00000402667 RGPD8O14715 1765 aaPredicted RBP21.46■■□□□ 1.03
DNMT3A-205ENST00000402667 PIK3R4Q99570 1358 aa21.46■■□□□ 1.03
DNMT3A-205ENST00000402667 ZBTB7BO15156 539 aaPredicted RBP21.46■■□□□ 1.03
DNMT3A-205ENST00000402667 RGPD1P0DJD0 1748 aa21.45■■□□□ 1.02
DNMT3A-205ENST00000402667 XRN1Q8IZH2 1706 aaKnown RBP21.45■■□□□ 1.02
DNMT3A-205ENST00000402667 KCNA6P17658 529 aa21.44■■□□□ 1.02
DNMT3A-205ENST00000402667 DEKP35659 375 aaKnown RBP21.43■■□□□ 1.02
DNMT3A-205ENST00000402667 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
DNMT3A-205ENST00000402667 CHMP4BQ9H444 224 aaKnown RBP21.43■■□□□ 1.02
DNMT3A-205ENST00000402667 ABCC4O15439 1325 aa21.42■■□□□ 1.02
DNMT3A-205ENST00000402667 MCM10Q7L590 875 aa21.42■■□□□ 1.02
DNMT3A-205ENST00000402667 CHL1O00533 1208 aa21.41■■□□□ 1.02
DNMT3A-205ENST00000402667 SBNO1A3KN83 1393 aa21.41■■□□□ 1.02
DNMT3A-205ENST00000402667 USP35Q9P2H5 1018 aa21.41■■□□□ 1.02
DNMT3A-205ENST00000402667 ARHGEF10O15013 1369 aa21.41■■□□□ 1.02
DNMT3A-205ENST00000402667 FLT4P35916 1363 aa21.41■■□□□ 1.02
DNMT3A-205ENST00000402667 NUCB1Q02818 461 aa21.4■■□□□ 1.02
DNMT3A-205ENST00000402667 API5Q9BZZ5 524 aaKnown RBP21.4■■□□□ 1.02
DNMT3A-205ENST00000402667 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
DNMT3A-205ENST00000402667 ANKARQ7Z5J8 1434 aa21.4■■□□□ 1.02
DNMT3A-205ENST00000402667 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
DNMT3A-205ENST00000402667 AMPHP49418 695 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 PIK3C2AO00443 1686 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 NLRP6P59044 892 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 KRT24Q2M2I5 525 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 C1orf115Q9H7X2 142 aa21.38■■□□□ 1.01
DNMT3A-205ENST00000402667 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
DNMT3A-205ENST00000402667 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
DNMT3A-205ENST00000402667 MTHFSDQ2M296 383 aaKnown RBP21.36■■□□□ 1.01
DNMT3A-205ENST00000402667 HAP1P54257 671 aaPredicted RBP21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 CHD1LQ86WJ1 897 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 EYA1Q99502 592 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 CRB1P82279 1406 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 KDRP35968 1356 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 KIAA0232Q92628 1395 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 FOXO3O43524 673 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 LNPKQ9C0E8 428 aa21.35■■□□□ 1.01
DNMT3A-205ENST00000402667 IGSF1Q8N6C5 1336 aa21.34■■□□□ 1.01
DNMT3A-205ENST00000402667 GCC1Q96CN9 775 aa21.34■■□□□ 1.01
DNMT3A-205ENST00000402667 SIRT2Q8IXJ6 389 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms