RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 IGHDP01880 384 aa15.13■□□□□ 0.01
COL25A1-202ENST00000399127 RGS3P49796 1198 aa15.13■□□□□ 0.01
COL25A1-202ENST00000399127 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
COL25A1-202ENST00000399127 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
COL25A1-202ENST00000399127 XRN1Q8IZH2 1706 aaKnown RBP15.13■□□□□ 0.01
COL25A1-202ENST00000399127 MS4A1P11836 297 aa15.13■□□□□ 0.01
COL25A1-202ENST00000399127 BACH2Q9BYV9 841 aa15.13■□□□□ 0.01
COL25A1-202ENST00000399127 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
COL25A1-202ENST00000399127 AATKQ6ZMQ8 1374 aa15.12■□□□□ 0.01
COL25A1-202ENST00000399127 SMC4Q9NTJ3 1288 aa15.12■□□□□ 0.01
COL25A1-202ENST00000399127 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
COL25A1-202ENST00000399127 PLEKHG3A1L390 1219 aa15.11■□□□□ 0.01
COL25A1-202ENST00000399127 NGDNQ8NEJ9 315 aaKnown RBP15.11■□□□□ 0.01
COL25A1-202ENST00000399127 SSH1Q8WYL5 1049 aa15.11■□□□□ 0.01
COL25A1-202ENST00000399127 USP6P35125 1406 aa15.1■□□□□ 0.01
COL25A1-202ENST00000399127 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
COL25A1-202ENST00000399127 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
COL25A1-202ENST00000399127 IL16Q14005 1332 aa15.09■□□□□ 0.01
COL25A1-202ENST00000399127 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
COL25A1-202ENST00000399127 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
COL25A1-202ENST00000399127 AEBP1Q8IUX7 1158 aa15.09■□□□□ 0.01
COL25A1-202ENST00000399127 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
COL25A1-202ENST00000399127 NRKQ7Z2Y5 1582 aa15.08■□□□□ 0.01
COL25A1-202ENST00000399127 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0.01
COL25A1-202ENST00000399127 RGPD8O14715 1765 aaPredicted RBP15.08■□□□□ 0
COL25A1-202ENST00000399127 FAM83GA6ND36 823 aa15.07■□□□□ 0
COL25A1-202ENST00000399127 EIF4A2Q14240 407 aaKnown RBP15.07■□□□□ 0
COL25A1-202ENST00000399127 HSP90AB2PQ58FF8 381 aa15.07■□□□□ 0
COL25A1-202ENST00000399127 PCDHB15Q9Y5E8 787 aa15.07■□□□□ 0
COL25A1-202ENST00000399127 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
COL25A1-202ENST00000399127 OVOS2A0A0J9YW53 1432 aa15.07■□□□□ 0
COL25A1-202ENST00000399127 OVOS2Q6IE36 1432 aa15.07■□□□□ 0
COL25A1-202ENST00000399127 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
COL25A1-202ENST00000399127 TRIM27P14373 513 aa15.06■□□□□ 0
COL25A1-202ENST00000399127 DCTN1Q14203 1278 aa15.06■□□□□ 0
COL25A1-202ENST00000399127 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
COL25A1-202ENST00000399127 DZIP1LQ8IYY4 767 aaKnown RBP15.06■□□□□ 0
COL25A1-202ENST00000399127 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
COL25A1-202ENST00000399127 NBR1Q14596 966 aa15.06■□□□□ 0
COL25A1-202ENST00000399127 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
COL25A1-202ENST00000399127 NUTM2GQ5VZR2 741 aa15.05■□□□□ 0
COL25A1-202ENST00000399127 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ 0
COL25A1-202ENST00000399127 MVPQ14764 893 aaKnown RBP15.05■□□□□ -0
COL25A1-202ENST00000399127 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ -0
COL25A1-202ENST00000399127 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
COL25A1-202ENST00000399127 ITPRIPQ8IWB1 547 aa15.03■□□□□ -0
COL25A1-202ENST00000399127 ATF7IPQ6VMQ6 1270 aa15.03■□□□□ -0
COL25A1-202ENST00000399127 TSPYL6Q8N831 410 aa15.03■□□□□ -0
COL25A1-202ENST00000399127 SSH2Q76I76 1423 aa15.03■□□□□ -0
COL25A1-202ENST00000399127 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
COL25A1-202ENST00000399127 PEAK1Q9H792 1746 aa15.02■□□□□ -0
COL25A1-202ENST00000399127 MBIPQ9NS73 344 aa15.02■□□□□ -0
COL25A1-202ENST00000399127 MAP3K19Q56UN5 1328 aa15.02□□□□□ -0.01
COL25A1-202ENST00000399127 NALCNQ8IZF0 1738 aa15.02□□□□□ -0.01
COL25A1-202ENST00000399127 PODXL2Q9NZ53 605 aa15.02□□□□□ -0.01
COL25A1-202ENST00000399127 PHF8Q9UPP1 1060 aa15.02□□□□□ -0.01
COL25A1-202ENST00000399127 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
COL25A1-202ENST00000399127 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
COL25A1-202ENST00000399127 GNAI1P63096 354 aa15.01□□□□□ -0.01
COL25A1-202ENST00000399127 C8orf34Q49A92 452 aa15.01□□□□□ -0.01
COL25A1-202ENST00000399127 NLRP6P59044 892 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 USP31Q70CQ4 1352 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 CALD1Q05682 793 aaKnown RBP15□□□□□ -0.01
COL25A1-202ENST00000399127 FAM161AQ3B820 660 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 IFT57Q9NWB7 429 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
COL25A1-202ENST00000399127 FMN2Q9NZ56 1722 aa15□□□□□ -0.01
COL25A1-202ENST00000399127 VAMP4O75379 141 aa14.99□□□□□ -0.01
COL25A1-202ENST00000399127 MCM10Q7L590 875 aa14.99□□□□□ -0.01
COL25A1-202ENST00000399127 KIF16BQ96L93 1317 aa14.99□□□□□ -0.01
COL25A1-202ENST00000399127 ZNF853P0CG23 659 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 AMPHP49418 695 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 LMOD3Q0VAK6 560 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 C8orf58Q8NAV2 365 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 PSME1Q06323 249 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 CFAP44Q96MT7 982 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
COL25A1-202ENST00000399127 AAMPQ13685 434 aa14.97□□□□□ -0.01
COL25A1-202ENST00000399127 ALDH1L2Q3SY69 923 aa14.97□□□□□ -0.01
COL25A1-202ENST00000399127 ABTB2Q8N961 1025 aa14.97□□□□□ -0.01
COL25A1-202ENST00000399127 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
COL25A1-202ENST00000399127 IPO8O15397 1037 aaKnown RBP14.97□□□□□ -0.01
COL25A1-202ENST00000399127 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
COL25A1-202ENST00000399127 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
COL25A1-202ENST00000399127 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
COL25A1-202ENST00000399127 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
COL25A1-202ENST00000399127 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
COL25A1-202ENST00000399127 NWD1Q149M9 1564 aa14.96□□□□□ -0.02
COL25A1-202ENST00000399127 FOXO3O43524 673 aa14.96□□□□□ -0.02
COL25A1-202ENST00000399127 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.02
COL25A1-202ENST00000399127 TMEM94Q12767 1356 aa14.96□□□□□ -0.02
COL25A1-202ENST00000399127 ATF3P18847 181 aa14.95□□□□□ -0.02
COL25A1-202ENST00000399127 KRT24Q2M2I5 525 aa14.95□□□□□ -0.02
COL25A1-202ENST00000399127 FLT4P35916 1363 aa14.95□□□□□ -0.02
COL25A1-202ENST00000399127 MRPL50Q8N5N7 158 aaKnown RBP14.94□□□□□ -0.02
COL25A1-202ENST00000399127 SBNO1A3KN83 1393 aa14.94□□□□□ -0.02
COL25A1-202ENST00000399127 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms