RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
SEC24B-202ENST00000399100 ATF7IPQ6VMQ6 1270 aa16.84■□□□□ 0.29
SEC24B-202ENST00000399100 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
SEC24B-202ENST00000399100 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
SEC24B-202ENST00000399100 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEC24B-202ENST00000399100 ZKSCAN2Q63HK3 967 aa16.84■□□□□ 0.29
SEC24B-202ENST00000399100 USP6P35125 1406 aa16.84■□□□□ 0.29
SEC24B-202ENST00000399100 CRB1P82279 1406 aa16.84■□□□□ 0.29
SEC24B-202ENST00000399100 LMO7Q8WWI1 1683 aa16.83■□□□□ 0.29
SEC24B-202ENST00000399100 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
SEC24B-202ENST00000399100 NBR1Q14596 966 aa16.83■□□□□ 0.28
SEC24B-202ENST00000399100 NFKBIBQ15653 356 aa16.83■□□□□ 0.28
SEC24B-202ENST00000399100 WAPLQ7Z5K2 1190 aa16.83■□□□□ 0.28
SEC24B-202ENST00000399100 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
SEC24B-202ENST00000399100 PHACTR3Q96KR7 559 aa16.83■□□□□ 0.28
SEC24B-202ENST00000399100 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
SEC24B-202ENST00000399100 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
SEC24B-202ENST00000399100 VAMP4O75379 141 aa16.81■□□□□ 0.28
SEC24B-202ENST00000399100 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
SEC24B-202ENST00000399100 MRPL50Q8N5N7 158 aaKnown RBP16.81■□□□□ 0.28
SEC24B-202ENST00000399100 KDRP35968 1356 aa16.81■□□□□ 0.28
SEC24B-202ENST00000399100 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
SEC24B-202ENST00000399100 TNRQ92752 1358 aa16.81■□□□□ 0.28
SEC24B-202ENST00000399100 ZBTB7BO15156 539 aaPredicted RBP16.8■□□□□ 0.28
SEC24B-202ENST00000399100 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
SEC24B-202ENST00000399100 STK26Q9P289 416 aa16.8■□□□□ 0.28
SEC24B-202ENST00000399100 NUCB1Q02818 461 aa16.79■□□□□ 0.28
SEC24B-202ENST00000399100 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
SEC24B-202ENST00000399100 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
SEC24B-202ENST00000399100 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
SEC24B-202ENST00000399100 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
SEC24B-202ENST00000399100 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
SEC24B-202ENST00000399100 NOB1Q9ULX3 412 aaKnown RBP16.79■□□□□ 0.28
SEC24B-202ENST00000399100 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
SEC24B-202ENST00000399100 LMTK3Q96Q04 1460 aa16.78■□□□□ 0.28
SEC24B-202ENST00000399100 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
SEC24B-202ENST00000399100 RIPK4P57078 832 aa16.77■□□□□ 0.28
SEC24B-202ENST00000399100 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.28
SEC24B-202ENST00000399100 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.28
SEC24B-202ENST00000399100 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
SEC24B-202ENST00000399100 DDX19BQ9UMR2 479 aa16.77■□□□□ 0.28
SEC24B-202ENST00000399100 TRPM3Q9HCF6 1732 aaPredicted RBP16.77■□□□□ 0.27
SEC24B-202ENST00000399100 NFAT5O94916 1531 aa16.77■□□□□ 0.27
SEC24B-202ENST00000399100 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.27
SEC24B-202ENST00000399100 RWDD1Q9H446 243 aaPredicted RBP16.77■□□□□ 0.27
SEC24B-202ENST00000399100 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
SEC24B-202ENST00000399100 RGS3P49796 1198 aa16.76■□□□□ 0.27
SEC24B-202ENST00000399100 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
SEC24B-202ENST00000399100 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
SEC24B-202ENST00000399100 KIAA0232Q92628 1395 aa16.76■□□□□ 0.27
SEC24B-202ENST00000399100 NEFMP07197 916 aa16.75■□□□□ 0.27
SEC24B-202ENST00000399100 NCAPD2Q15021 1401 aa16.75■□□□□ 0.27
SEC24B-202ENST00000399100 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
SEC24B-202ENST00000399100 KIF2CQ99661 725 aa16.75■□□□□ 0.27
SEC24B-202ENST00000399100 SLC4A3P48751 1232 aa16.75■□□□□ 0.27
SEC24B-202ENST00000399100 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
SEC24B-202ENST00000399100 FBLN1P23142 703 aa16.74■□□□□ 0.27
SEC24B-202ENST00000399100 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
SEC24B-202ENST00000399100 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
SEC24B-202ENST00000399100 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
SEC24B-202ENST00000399100 EMILIN1Q9Y6C2 1016 aa16.74■□□□□ 0.27
SEC24B-202ENST00000399100 NME9Q86XW9 330 aa16.74■□□□□ 0.27
SEC24B-202ENST00000399100 PRKAR2BP31323 418 aa16.73■□□□□ 0.27
SEC24B-202ENST00000399100 NUDT16Q96DE0 195 aaKnown RBP16.73■□□□□ 0.27
SEC24B-202ENST00000399100 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
SEC24B-202ENST00000399100 ANKARQ7Z5J8 1434 aa16.73■□□□□ 0.27
SEC24B-202ENST00000399100 TSPYL6Q8N831 410 aa16.72■□□□□ 0.27
SEC24B-202ENST00000399100 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
SEC24B-202ENST00000399100 POGKQ9P215 609 aa16.72■□□□□ 0.27
SEC24B-202ENST00000399100 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
SEC24B-202ENST00000399100 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
SEC24B-202ENST00000399100 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
SEC24B-202ENST00000399100 RTL1A6NKG5 1358 aa16.71■□□□□ 0.27
SEC24B-202ENST00000399100 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
SEC24B-202ENST00000399100 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
SEC24B-202ENST00000399100 ADAMTSL3P82987 1691 aa16.7■□□□□ 0.26
SEC24B-202ENST00000399100 LTKP29376 864 aa16.68■□□□□ 0.26
SEC24B-202ENST00000399100 GSE1Q14687 1217 aa16.68■□□□□ 0.26
SEC24B-202ENST00000399100 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
SEC24B-202ENST00000399100 PXDNLA1KZ92 1463 aa16.67■□□□□ 0.26
SEC24B-202ENST00000399100 CHL1O00533 1208 aa16.67■□□□□ 0.26
SEC24B-202ENST00000399100 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
SEC24B-202ENST00000399100 INTS3Q68E01 1043 aaKnown RBP16.67■□□□□ 0.26
SEC24B-202ENST00000399100 MST1RQ04912 1400 aa16.67■□□□□ 0.26
SEC24B-202ENST00000399100 SNX21Q969T3 373 aa16.66■□□□□ 0.26
SEC24B-202ENST00000399100 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
SEC24B-202ENST00000399100 BMP2KLQ5H9B9 411 aa16.66■□□□□ 0.26
SEC24B-202ENST00000399100 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
SEC24B-202ENST00000399100 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
SEC24B-202ENST00000399100 SLIT3O75094 1523 aa16.65■□□□□ 0.26
SEC24B-202ENST00000399100 GNAI1P63096 354 aa16.64■□□□□ 0.26
SEC24B-202ENST00000399100 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
SEC24B-202ENST00000399100 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
SEC24B-202ENST00000399100 SOX12O15370 315 aa16.63■□□□□ 0.25
SEC24B-202ENST00000399100 CHD1LQ86WJ1 897 aa16.63■□□□□ 0.25
SEC24B-202ENST00000399100 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
SEC24B-202ENST00000399100 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
SEC24B-202ENST00000399100 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
SEC24B-202ENST00000399100 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
SEC24B-202ENST00000399100 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms