RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
RPRD1A-202ENST00000399022 PCDHB15Q9Y5E8 787 aa17.61■□□□□ 0.41
RPRD1A-202ENST00000399022 COL17A1Q9UMD9 1497 aaPredicted RBP17.61■□□□□ 0.41
RPRD1A-202ENST00000399022 VPS37CA5D8V6 355 aaPredicted RBP17.61■□□□□ 0.41
RPRD1A-202ENST00000399022 GCC1Q96CN9 775 aa17.61■□□□□ 0.41
RPRD1A-202ENST00000399022 HDAC5Q9UQL6 1122 aa17.6■□□□□ 0.41
RPRD1A-202ENST00000399022 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
RPRD1A-202ENST00000399022 FYB1O15117 783 aa17.59■□□□□ 0.41
RPRD1A-202ENST00000399022 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
RPRD1A-202ENST00000399022 DYNC1I1O14576 645 aa17.59■□□□□ 0.41
RPRD1A-202ENST00000399022 NPHP1O15259 732 aa17.58■□□□□ 0.41
RPRD1A-202ENST00000399022 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.41
RPRD1A-202ENST00000399022 CCAR2Q8N163 923 aaKnown RBP17.58■□□□□ 0.41
RPRD1A-202ENST00000399022 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
RPRD1A-202ENST00000399022 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
RPRD1A-202ENST00000399022 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 SMC3Q9UQE7 1217 aa17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 OFD1O75665 1012 aa17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 TEX35Q5T0J7 233 aa17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 RLBP1P12271 317 aa17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 TPD52L1Q16890 204 aaPredicted RBP17.57■□□□□ 0.4
RPRD1A-202ENST00000399022 FIBPO43427 364 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 GAS2L2Q8NHY3 880 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 BAG4O95429 457 aaKnown RBP17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 CGNQ9P2M7 1197 aaKnown RBP17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 TPM4P67936 248 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 TRIM5Q9C035 493 aa17.56■□□□□ 0.4
RPRD1A-202ENST00000399022 WDR7Q9Y4E6 1490 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 HSP90B1P14625 803 aaKnown RBP17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 KLHL40Q2TBA0 621 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 SPDYE4A6NLX3 237 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 WASLO00401 505 aaPredicted RBP17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 CEBPAP49715 358 aaPredicted RBP17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 HOMER1Q86YM7 354 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 BICD2Q8TD16 824 aa17.55■□□□□ 0.4
RPRD1A-202ENST00000399022 TPM3P06753 285 aa17.54■□□□□ 0.4
RPRD1A-202ENST00000399022 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
RPRD1A-202ENST00000399022 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
RPRD1A-202ENST00000399022 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
RPRD1A-202ENST00000399022 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
RPRD1A-202ENST00000399022 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 ABCC2Q92887 1545 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 GNAI3P08754 354 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 GOLGA6L1Q8N7Z2 621 aa17.53■□□□□ 0.4
RPRD1A-202ENST00000399022 NEXNQ0ZGT2 675 aa17.52■□□□□ 0.4
RPRD1A-202ENST00000399022 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.4
RPRD1A-202ENST00000399022 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
RPRD1A-202ENST00000399022 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
RPRD1A-202ENST00000399022 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.39
RPRD1A-202ENST00000399022 ERICH4A6NGS2 130 aa17.52■□□□□ 0.39
RPRD1A-202ENST00000399022 GNAI2P04899 355 aa17.52■□□□□ 0.39
RPRD1A-202ENST00000399022 GPS2Q13227 327 aa17.51■□□□□ 0.39
RPRD1A-202ENST00000399022 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-202ENST00000399022 SMARCA5O60264 1052 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-202ENST00000399022 TTC5Q8N0Z6 440 aa17.51■□□□□ 0.39
RPRD1A-202ENST00000399022 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
RPRD1A-202ENST00000399022 EXOC6BQ9Y2D4 811 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 POLR3AO14802 1390 aaPredicted RBP17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 H3BQV1 296 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 FBXW7Q969H0 707 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 F6X3S4 739 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 EIF2AK4Q9P2K8 1649 aaKnown RBP17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 LETM1O95202 739 aaPredicted RBP17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 MCM5P33992 734 aa17.5■□□□□ 0.39
RPRD1A-202ENST00000399022 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 RAPGEF4Q8WZA2 1011 aa17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 ZKSCAN5Q9Y2L8 839 aa17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 MCM2P49736 904 aa17.49■□□□□ 0.39
RPRD1A-202ENST00000399022 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 ZNF518AQ6AHZ1 1483 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 NSD2O96028 1365 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 MNS1Q8NEH6 495 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 MBIPQ9NS73 344 aa17.48■□□□□ 0.39
RPRD1A-202ENST00000399022 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 RUFY2Q8WXA3 655 aa17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 ARGLU1Q9NWB6 273 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 IGSF3O75054 1194 aa17.47■□□□□ 0.39
RPRD1A-202ENST00000399022 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
RPRD1A-202ENST00000399022 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms