RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 REC8O95072 547 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 ATF3P18847 181 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 PTMSP20962 102 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 ANKRD36BQ8N2N9 1353 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 CCDC61Q9Y6R9 512 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 ATP10AO60312 1499 aa11.1□□□□□ -0.63
SEC24A-202ENST00000398844 FAM177BA6PVY3 158 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 TSPYL6Q8N831 410 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 DNAJC2Q99543 621 aaKnown RBP11.09□□□□□ -0.63
SEC24A-202ENST00000398844 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 ACEP12821 1306 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
SEC24A-202ENST00000398844 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
SEC24A-202ENST00000398844 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
SEC24A-202ENST00000398844 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 TOMM22Q9NS69 142 aa11.09□□□□□ -0.63
SEC24A-202ENST00000398844 PROSER2Q86WR7 435 aaPredicted RBP11.08□□□□□ -0.64
SEC24A-202ENST00000398844 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 TRPM1Q7Z4N2 1603 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 NEXNQ0ZGT2 675 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 PHACTR3Q96KR7 559 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 RIMS2Q9UQ26 1411 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 GNAT3A8MTJ3 354 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 NEK4P51957 841 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 H3BQV1 296 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 FOXO3O43524 673 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
SEC24A-202ENST00000398844 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 CAVIN1Q6NZI2 390 aaKnown RBP11.08□□□□□ -0.64
SEC24A-202ENST00000398844 ZNF530Q6P9A1 599 aaPredicted RBP11.08□□□□□ -0.64
SEC24A-202ENST00000398844 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
SEC24A-202ENST00000398844 BLMP54132 1417 aaPredicted RBP11.08□□□□□ -0.64
SEC24A-202ENST00000398844 VPS37CA5D8V6 355 aaPredicted RBP11.07□□□□□ -0.64
SEC24A-202ENST00000398844 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
SEC24A-202ENST00000398844 C16orf71Q8IYS4 520 aaPredicted RBP11.07□□□□□ -0.64
SEC24A-202ENST00000398844 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
SEC24A-202ENST00000398844 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
SEC24A-202ENST00000398844 LRRCC1Q9C099 1032 aa11.07□□□□□ -0.64
SEC24A-202ENST00000398844 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
SEC24A-202ENST00000398844 THEMISQ8N1K5 641 aaPredicted RBP11.07□□□□□ -0.64
SEC24A-202ENST00000398844 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
SEC24A-202ENST00000398844 KIF1BO60333 1816 aa11.07□□□□□ -0.64
SEC24A-202ENST00000398844 MPNDQ8N594 471 aa11.06□□□□□ -0.64
SEC24A-202ENST00000398844 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
SEC24A-202ENST00000398844 STK3Q13188 491 aa11.06□□□□□ -0.64
SEC24A-202ENST00000398844 AAMPQ13685 434 aa11.06□□□□□ -0.64
SEC24A-202ENST00000398844 SYAP1Q96A49 352 aaPredicted RBP11.06□□□□□ -0.64
SEC24A-202ENST00000398844 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
SEC24A-202ENST00000398844 JARID2Q92833 1246 aaPredicted RBP11.06□□□□□ -0.64
SEC24A-202ENST00000398844 CLTCL1P53675 1640 aa11.05□□□□□ -0.64
SEC24A-202ENST00000398844 K7ELQ4 463 aaPredicted RBP11.05□□□□□ -0.64
SEC24A-202ENST00000398844 CWC27Q6UX04 472 aaKnown RBP11.05□□□□□ -0.64
SEC24A-202ENST00000398844 ANXA1P04083 346 aa11.05□□□□□ -0.64
SEC24A-202ENST00000398844 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
SEC24A-202ENST00000398844 PIK3C2GO75747 1445 aa11.05□□□□□ -0.64
SEC24A-202ENST00000398844 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
SEC24A-202ENST00000398844 DDX58O95786 925 aaKnown RBP11.05□□□□□ -0.64
SEC24A-202ENST00000398844 CT47B1P0C2W7 299 aaPredicted RBP11.05□□□□□ -0.64
SEC24A-202ENST00000398844 CNTROBQ8N137 903 aa11.05□□□□□ -0.64
SEC24A-202ENST00000398844 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
SEC24A-202ENST00000398844 SHROOM2Q13796 1616 aa11.04□□□□□ -0.64
SEC24A-202ENST00000398844 FSD1Q9BTV5 496 aa11.04□□□□□ -0.64
SEC24A-202ENST00000398844 CCT4P50991 539 aaKnown RBP11.04□□□□□ -0.64
SEC24A-202ENST00000398844 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
SEC24A-202ENST00000398844 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
SEC24A-202ENST00000398844 POLR3AO14802 1390 aaPredicted RBP11.04□□□□□ -0.64
SEC24A-202ENST00000398844 ALDH1L2Q3SY69 923 aa11.04□□□□□ -0.64
SEC24A-202ENST00000398844 SRGAP3O43295 1099 aa11.03□□□□□ -0.64
SEC24A-202ENST00000398844 SKOR2Q2VWA4 1001 aaPredicted RBP11.03□□□□□ -0.64
SEC24A-202ENST00000398844 CREBRFQ8IUR6 639 aa11.03□□□□□ -0.64
SEC24A-202ENST00000398844 MRPL50Q8N5N7 158 aaKnown RBP11.03□□□□□ -0.64
SEC24A-202ENST00000398844 LRRFIP2Q9Y608 721 aaKnown RBP11.03□□□□□ -0.64
SEC24A-202ENST00000398844 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
SEC24A-202ENST00000398844 YTHDC2Q9H6S0 1430 aaKnown RBP11.03□□□□□ -0.64
SEC24A-202ENST00000398844 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
SEC24A-202ENST00000398844 NSD2O96028 1365 aa11.03□□□□□ -0.64
SEC24A-202ENST00000398844 RBM42Q9BTD8 480 aaKnown RBP11.03□□□□□ -0.64
SEC24A-202ENST00000398844 ERC2O15083 957 aa11.02□□□□□ -0.64
SEC24A-202ENST00000398844 APPP05067 770 aa11.02□□□□□ -0.64
SEC24A-202ENST00000398844 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.64
SEC24A-202ENST00000398844 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.64
SEC24A-202ENST00000398844 GNAI3P08754 354 aa11.02□□□□□ -0.64
SEC24A-202ENST00000398844 NPATQ14207 1427 aa11.02□□□□□ -0.64
SEC24A-202ENST00000398844 PIP4K2AP48426 406 aaPredicted RBP11.02□□□□□ -0.65
SEC24A-202ENST00000398844 YEATS2Q9ULM3 1422 aa11.02□□□□□ -0.65
SEC24A-202ENST00000398844 CEBPZQ03701 1054 aaKnown RBP11.02□□□□□ -0.65
SEC24A-202ENST00000398844 TNRQ92752 1358 aa11.02□□□□□ -0.65
SEC24A-202ENST00000398844 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.65
SEC24A-202ENST00000398844 AACSQ86V21 672 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 SYNMO15061 1565 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 TRPM2O94759 1503 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 CEP152O94986 1710 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 GOLGA6L6A8MZA4 724 aa11.01□□□□□ -0.65
SEC24A-202ENST00000398844 ANKLE2Q86XL3 938 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms