RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 RSPH6AQ9H0K4 717 aa16.94■□□□□ 0.3
TOP3B-202ENST00000398793 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
TOP3B-202ENST00000398793 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
TOP3B-202ENST00000398793 EYA1Q99502 592 aa16.93■□□□□ 0.3
TOP3B-202ENST00000398793 ZMYND15Q9H091 742 aa16.93■□□□□ 0.3
TOP3B-202ENST00000398793 EXOSC9Q06265 439 aaKnown RBP16.93■□□□□ 0.3
TOP3B-202ENST00000398793 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
TOP3B-202ENST00000398793 USP6P35125 1406 aa16.92■□□□□ 0.3
TOP3B-202ENST00000398793 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
TOP3B-202ENST00000398793 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
TOP3B-202ENST00000398793 SLIT1O75093 1534 aa16.92■□□□□ 0.3
TOP3B-202ENST00000398793 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
TOP3B-202ENST00000398793 IL13P35225 146 aa16.92■□□□□ 0.3
TOP3B-202ENST00000398793 EDC4Q6P2E9 1401 aaKnown RBP16.91■□□□□ 0.3
TOP3B-202ENST00000398793 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
TOP3B-202ENST00000398793 CRBNQ96SW2 442 aa16.9■□□□□ 0.3
TOP3B-202ENST00000398793 NEURL4Q96JN8 1562 aa16.9■□□□□ 0.3
TOP3B-202ENST00000398793 MSH6P52701 1360 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 BRINP3Q76B58 766 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 SIRT1Q96EB6 747 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 NBPF6Q5VWK0 638 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 NBPF4Q96M43 638 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 COG6Q9Y2V7 657 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 MED14O60244 1454 aa16.89■□□□□ 0.29
TOP3B-202ENST00000398793 HOXC9P31274 260 aa16.88■□□□□ 0.29
TOP3B-202ENST00000398793 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
TOP3B-202ENST00000398793 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
TOP3B-202ENST00000398793 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 RRP1P56182 461 aaKnown RBP16.87■□□□□ 0.29
TOP3B-202ENST00000398793 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 DIP2AQ14689 1571 aa16.87■□□□□ 0.29
TOP3B-202ENST00000398793 PUS7Q96PZ0 661 aaKnown RBP16.87■□□□□ 0.29
TOP3B-202ENST00000398793 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
TOP3B-202ENST00000398793 MTHFSDQ2M296 383 aaKnown RBP16.86■□□□□ 0.29
TOP3B-202ENST00000398793 TECPR2O15040 1411 aa16.85■□□□□ 0.29
TOP3B-202ENST00000398793 RTF1Q92541 710 aaKnown RBP16.85■□□□□ 0.29
TOP3B-202ENST00000398793 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
TOP3B-202ENST00000398793 ANKRD24Q8TF21 1146 aa16.84■□□□□ 0.29
TOP3B-202ENST00000398793 PLEKHF1Q96S99 279 aa16.84■□□□□ 0.29
TOP3B-202ENST00000398793 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
TOP3B-202ENST00000398793 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.29
TOP3B-202ENST00000398793 GSE1Q14687 1217 aa16.83■□□□□ 0.29
TOP3B-202ENST00000398793 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.29
TOP3B-202ENST00000398793 SETD1AO15047 1707 aaKnown RBP16.83■□□□□ 0.28
TOP3B-202ENST00000398793 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
TOP3B-202ENST00000398793 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
TOP3B-202ENST00000398793 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
TOP3B-202ENST00000398793 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
TOP3B-202ENST00000398793 EVA1CP58658 441 aa16.83■□□□□ 0.28
TOP3B-202ENST00000398793 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
TOP3B-202ENST00000398793 FCHSD2O94868 740 aa16.82■□□□□ 0.28
TOP3B-202ENST00000398793 ARXQ96QS3 562 aa16.82■□□□□ 0.28
TOP3B-202ENST00000398793 ADGRL3Q9HAR2 1447 aa16.82■□□□□ 0.28
TOP3B-202ENST00000398793 ANXA1P04083 346 aa16.82■□□□□ 0.28
TOP3B-202ENST00000398793 E9PSI1 815 aa16.81■□□□□ 0.28
TOP3B-202ENST00000398793 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
TOP3B-202ENST00000398793 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
TOP3B-202ENST00000398793 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
TOP3B-202ENST00000398793 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
TOP3B-202ENST00000398793 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-202ENST00000398793 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
TOP3B-202ENST00000398793 NSD2O96028 1365 aa16.79■□□□□ 0.28
TOP3B-202ENST00000398793 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
TOP3B-202ENST00000398793 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
TOP3B-202ENST00000398793 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-202ENST00000398793 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
TOP3B-202ENST00000398793 ZNF530Q6P9A1 599 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-202ENST00000398793 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.28
TOP3B-202ENST00000398793 RGS3P49796 1198 aa16.77■□□□□ 0.28
TOP3B-202ENST00000398793 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
TOP3B-202ENST00000398793 C1orf115Q9H7X2 142 aa16.77■□□□□ 0.28
TOP3B-202ENST00000398793 MBIPQ9NS73 344 aa16.77■□□□□ 0.28
TOP3B-202ENST00000398793 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
TOP3B-202ENST00000398793 APBB1O00213 710 aa16.77■□□□□ 0.27
TOP3B-202ENST00000398793 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
TOP3B-202ENST00000398793 SLC4A10Q6U841 1118 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 FTSJ3Q8IY81 847 aaKnown RBP16.76■□□□□ 0.27
TOP3B-202ENST00000398793 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 KCNQ3O43525 872 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 RLBP1P12271 317 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
TOP3B-202ENST00000398793 KIAA0232Q92628 1395 aa16.76■□□□□ 0.27
TOP3B-202ENST00000398793 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
TOP3B-202ENST00000398793 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
TOP3B-202ENST00000398793 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
TOP3B-202ENST00000398793 BLMP54132 1417 aaPredicted RBP16.75■□□□□ 0.27
TOP3B-202ENST00000398793 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
TOP3B-202ENST00000398793 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
TOP3B-202ENST00000398793 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
TOP3B-202ENST00000398793 FLT4P35916 1363 aa16.74■□□□□ 0.27
TOP3B-202ENST00000398793 FAM43AQ8N2R8 423 aa16.74■□□□□ 0.27
TOP3B-202ENST00000398793 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
TOP3B-202ENST00000398793 EP400Q96L91 3159 aa16.73■□□□□ 0.27
TOP3B-202ENST00000398793 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
TOP3B-202ENST00000398793 RAPGEF4Q8WZA2 1011 aa16.73■□□□□ 0.27
TOP3B-202ENST00000398793 IP6K1Q92551 441 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms