RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 MBD3O95983 291 aa19.37■□□□□ 0.69
PCDHA12-201ENST00000398631 SRGAP3O43295 1099 aa19.37■□□□□ 0.69
PCDHA12-201ENST00000398631 CEP126Q9P2H0 1117 aa19.37■□□□□ 0.69
PCDHA12-201ENST00000398631 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
PCDHA12-201ENST00000398631 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
PCDHA12-201ENST00000398631 CYP46A1Q9Y6A2 500 aa19.36■□□□□ 0.69
PCDHA12-201ENST00000398631 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 KDM4AO75164 1064 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 OFD1O75665 1012 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 NFKBIBQ15653 356 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 ZSCAN25Q6NSZ9 544 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
PCDHA12-201ENST00000398631 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
PCDHA12-201ENST00000398631 RPAP2Q8IXW5 612 aaPredicted RBP19.34■□□□□ 0.69
PCDHA12-201ENST00000398631 ANKRD1Q15327 319 aa19.33■□□□□ 0.69
PCDHA12-201ENST00000398631 ZNF396Q96N95 335 aaPredicted RBP19.33■□□□□ 0.69
PCDHA12-201ENST00000398631 TXLNAP40222 546 aa19.33■□□□□ 0.68
PCDHA12-201ENST00000398631 CT47A1Q5JQC4 288 aaPredicted RBP19.33■□□□□ 0.68
PCDHA12-201ENST00000398631 EPS15P42566 896 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 AACSQ86V21 672 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 PIP4K2BP78356 416 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 STK38Q15208 465 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 TRIM22Q8IYM9 498 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 PPP1R1BQ9UD71 204 aaPredicted RBP19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
PCDHA12-201ENST00000398631 NAP1L1P55209 391 aaKnown RBP19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 JMYQ8N9B5 988 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 STARD3NLO95772 234 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 ADGRL1O94910 1474 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 CDK5RAP3Q96JB5 506 aa19.31■□□□□ 0.68
PCDHA12-201ENST00000398631 PLB1Q6P1J6 1458 aa19.3■□□□□ 0.68
PCDHA12-201ENST00000398631 FKBP4Q02790 459 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHA12-201ENST00000398631 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
PCDHA12-201ENST00000398631 FIBPO43427 364 aa19.29■□□□□ 0.68
PCDHA12-201ENST00000398631 MRE11P49959 708 aa19.29■□□□□ 0.68
PCDHA12-201ENST00000398631 ATP2B2Q01814 1243 aa19.29■□□□□ 0.68
PCDHA12-201ENST00000398631 RNF214Q8ND24 703 aa19.29■□□□□ 0.68
PCDHA12-201ENST00000398631 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
PCDHA12-201ENST00000398631 TRAK2O60296 914 aa19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 SLFN5Q08AF3 891 aa19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 DUSP27Q5VZP5 1158 aa19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 CAVIN1Q6NZI2 390 aaKnown RBP19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 IL1RAPL2Q9NP60 686 aa19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 CTNNA3Q9UI47 895 aa19.28■□□□□ 0.68
PCDHA12-201ENST00000398631 ODF2Q5BJF6 829 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 PHF8Q9UPP1 1060 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 BLOC1S2Q6QNY1 142 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 PDILTQ8N807 584 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 MNS1Q8NEH6 495 aa19.27■□□□□ 0.68
PCDHA12-201ENST00000398631 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.67
PCDHA12-201ENST00000398631 CCDC184Q52MB2 194 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 ABCC5O15440 1437 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 IDI1Q13907 227 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 MAP4K4O95819 1239 aaPredicted RBP19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 IGHMBP2P38935 993 aaKnown RBP19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 TRIM5Q9C035 493 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 AMOTL2Q9Y2J4 779 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 GRIN2AQ12879 1464 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 CCDC69A6NI79 296 aa19.26■□□□□ 0.67
PCDHA12-201ENST00000398631 MCM10Q7L590 875 aa19.25■□□□□ 0.67
PCDHA12-201ENST00000398631 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
PCDHA12-201ENST00000398631 PTCD1O75127 700 aaKnown RBP19.25■□□□□ 0.67
PCDHA12-201ENST00000398631 FILIP1LQ4L180 1135 aa19.25■□□□□ 0.67
PCDHA12-201ENST00000398631 NME9Q86XW9 330 aa19.25■□□□□ 0.67
PCDHA12-201ENST00000398631 PIP4K2AP48426 406 aaPredicted RBP19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 STK3Q13188 491 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 KRT18P05783 430 aaKnown RBP19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 FAM43AQ8N2R8 423 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 TMEM57Q8N5G2 664 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 ABCC11Q96J66 1382 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 LARP1Q6PKG0 1096 aaKnown RBP19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 WDR33Q9C0J8 1336 aaKnown RBP19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 FOXO3O43524 673 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
PCDHA12-201ENST00000398631 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 FBXO31Q5XUX0 539 aaPredicted RBP19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 MIS18AQ9NYP9 233 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 TDO2P48775 406 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 KRT32Q14532 448 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 RAI14Q9P0K7 980 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 STK11IPQ8N1F8 1099 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 CCDC39Q9UFE4 941 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 BICDL1Q6ZP65 573 aa19.23■□□□□ 0.67
PCDHA12-201ENST00000398631 RBM5P52756 815 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCDHA12-201ENST00000398631 SOGA3Q5TF21 947 aa19.22■□□□□ 0.67
PCDHA12-201ENST00000398631 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms