RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 MYL6BP14649 208 aa13.97□□□□□ -0.17
PCDHGA8-201ENST00000398604 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA8-201ENST00000398604 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
PCDHGA8-201ENST00000398604 CCDC85AQ96PX6 553 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA8-201ENST00000398604 GAS2L2Q8NHY3 880 aa13.97□□□□□ -0.17
PCDHGA8-201ENST00000398604 IDI1Q13907 227 aa13.96□□□□□ -0.17
PCDHGA8-201ENST00000398604 CHMP4CQ96CF2 233 aa13.96□□□□□ -0.17
PCDHGA8-201ENST00000398604 CCDC30Q5VVM6 783 aa13.96□□□□□ -0.17
PCDHGA8-201ENST00000398604 IKQ13123 557 aaPredicted RBP13.96□□□□□ -0.18
PCDHGA8-201ENST00000398604 RRP12Q5JTH9 1297 aaKnown RBP13.96□□□□□ -0.18
PCDHGA8-201ENST00000398604 TATP17735 454 aaPredicted RBP13.95□□□□□ -0.18
PCDHGA8-201ENST00000398604 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
PCDHGA8-201ENST00000398604 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 GNAI3P08754 354 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 NEK4P51957 841 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 WAPLQ7Z5K2 1190 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 ARHGEF5Q12774 1597 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
PCDHGA8-201ENST00000398604 NOB1Q9ULX3 412 aaKnown RBP13.93□□□□□ -0.18
PCDHGA8-201ENST00000398604 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
PCDHGA8-201ENST00000398604 CABP4P57796 275 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 RNF214Q8ND24 703 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 BACH2Q9BYV9 841 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 CCDC43Q96MW1 224 aaKnown RBP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 MYO5CQ9NQX4 1742 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 PTCD1O75127 700 aaKnown RBP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 SAFBQ15424 915 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
PCDHGA8-201ENST00000398604 MAGI2Q86UL8 1455 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 MAP4K4O95819 1239 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 ATAD2Q6PL18 1390 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 TPM1P09493 284 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 CEBPAP49715 358 aaPredicted RBP13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
PCDHGA8-201ENST00000398604 BICDL1Q6ZP65 573 aa13.9□□□□□ -0.18
PCDHGA8-201ENST00000398604 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
PCDHGA8-201ENST00000398604 CDC45O75419 566 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 FOXO3O43524 673 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 IL1RAPL2Q9NP60 686 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 IPO7O95373 1038 aaKnown RBP13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 SKOR2Q2VWA4 1001 aaPredicted RBP13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 CCDC73Q6ZRK6 1079 aa13.89□□□□□ -0.19
PCDHGA8-201ENST00000398604 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
PCDHGA8-201ENST00000398604 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
PCDHGA8-201ENST00000398604 GNAI2P04899 355 aa13.88□□□□□ -0.19
PCDHGA8-201ENST00000398604 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
PCDHGA8-201ENST00000398604 CNTROBQ8N137 903 aa13.88□□□□□ -0.19
PCDHGA8-201ENST00000398604 TPM2P07951 284 aa13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 CCDC47Q96A33 483 aaKnown RBP13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 ZFYVE16Q7Z3T8 1539 aa13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
PCDHGA8-201ENST00000398604 SASS6Q6UVJ0 657 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 NUCB2P80303 420 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 FKBP4Q02790 459 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 STK3Q13188 491 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 CNKSR2Q8WXI2 1034 aa13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
PCDHGA8-201ENST00000398604 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 USHBP1Q8N6Y0 703 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 ZMYM3Q14202 1370 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
PCDHGA8-201ENST00000398604 ADAMTS2O95450 1211 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 MCM10Q7L590 875 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 FIBPO43427 364 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 C20orf194Q5TEA3 1177 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 MPNDQ8N594 471 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 NOS1P29475 1434 aa13.84□□□□□ -0.19
PCDHGA8-201ENST00000398604 ADGBQ8N7X0 1667 aa13.83□□□□□ -0.2
PCDHGA8-201ENST00000398604 ATF7IPQ6VMQ6 1270 aa13.83□□□□□ -0.2
PCDHGA8-201ENST00000398604 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
PCDHGA8-201ENST00000398604 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
PCDHGA8-201ENST00000398604 SF3B2Q13435 895 aaKnown RBP13.82□□□□□ -0.2
PCDHGA8-201ENST00000398604 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms