RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 USP19O94966 1318 aa7.51□□□□□ -1.21
PTPRD-206ENST00000397617 IL13P35225 146 aa7.51□□□□□ -1.21
PTPRD-206ENST00000397617 RARSP54136 660 aaKnown RBP7.5□□□□□ -1.21
PTPRD-206ENST00000397617 CABP2Q9NPB3 220 aa7.5□□□□□ -1.21
PTPRD-206ENST00000397617 PRR36Q9H6K5 1346 aa7.5□□□□□ -1.21
PTPRD-206ENST00000397617 RSPH6AQ9H0K4 717 aa7.5□□□□□ -1.21
PTPRD-206ENST00000397617 AMOTQ4VCS5 1084 aa7.5□□□□□ -1.21
PTPRD-206ENST00000397617 RWDD1Q9H446 243 aaPredicted RBP7.5□□□□□ -1.21
PTPRD-206ENST00000397617 SLIT3O75094 1523 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 CLUAP1Q96AJ1 413 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 PTPRCP08575 1304 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 ACEP12821 1306 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 KDM2BQ8NHM5 1336 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 ERBB4Q15303 1308 aa7.49□□□□□ -1.21
PTPRD-206ENST00000397617 ATF7IPQ6VMQ6 1270 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 PHF8Q9UPP1 1060 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 CHL1O00533 1208 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 HMGB2P26583 209 aaKnown RBP7.48□□□□□ -1.21
PTPRD-206ENST00000397617 SMC5Q8IY18 1101 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 NPHP3Q7Z494 1330 aa7.48□□□□□ -1.21
PTPRD-206ENST00000397617 STK26Q9P289 416 aa7.47□□□□□ -1.21
PTPRD-206ENST00000397617 USP35Q9P2H5 1018 aa7.47□□□□□ -1.21
PTPRD-206ENST00000397617 CAMTA1Q9Y6Y1 1673 aa7.47□□□□□ -1.21
PTPRD-206ENST00000397617 PSME1Q06323 249 aa7.47□□□□□ -1.21
PTPRD-206ENST00000397617 KLHL34Q8N239 644 aa7.46□□□□□ -1.21
PTPRD-206ENST00000397617 NFAT5O94916 1531 aa7.46□□□□□ -1.22
PTPRD-206ENST00000397617 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
PTPRD-206ENST00000397617 GGNBP2Q9H3C7 697 aa7.46□□□□□ -1.22
PTPRD-206ENST00000397617 MLECQ14165 292 aa7.46□□□□□ -1.22
PTPRD-206ENST00000397617 MVPQ14764 893 aaKnown RBP7.46□□□□□ -1.22
PTPRD-206ENST00000397617 NGDNQ8NEJ9 315 aaKnown RBP7.46□□□□□ -1.22
PTPRD-206ENST00000397617 TSHZ2Q9NRE2 1034 aa7.46□□□□□ -1.22
PTPRD-206ENST00000397617 ADAMTS7Q9UKP4 1686 aa7.46□□□□□ -1.22
PTPRD-206ENST00000397617 DDRGK1Q96HY6 314 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 CEMIPQ8WUJ3 1361 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 RPAP2Q8IXW5 612 aaPredicted RBP7.45□□□□□ -1.22
PTPRD-206ENST00000397617 IP6K1Q92551 441 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 MAP3K19Q56UN5 1328 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 GCC1Q96CN9 775 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 RGS12O14924 1447 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 TRIM35Q9UPQ4 493 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 N4BP2Q86UW6 1770 aaPredicted RBP7.45□□□□□ -1.22
PTPRD-206ENST00000397617 HSP90AB1P08238 724 aaKnown RBP7.45□□□□□ -1.22
PTPRD-206ENST00000397617 WAPLQ7Z5K2 1190 aa7.45□□□□□ -1.22
PTPRD-206ENST00000397617 PRKAR2BP31323 418 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 LRRC37A3O60309 1634 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 C1orf167Q5SNV9 1468 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 PIK3C2AO00443 1686 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 RIPK4P57078 832 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 ABCC4O15439 1325 aa7.44□□□□□ -1.22
PTPRD-206ENST00000397617 ANP32AP39687 249 aaKnown RBP7.44□□□□□ -1.22
PTPRD-206ENST00000397617 RGL2O15211 777 aa7.43□□□□□ -1.22
PTPRD-206ENST00000397617 DLG5Q8TDM6 1919 aa7.43□□□□□ -1.22
PTPRD-206ENST00000397617 INTS3Q68E01 1043 aaKnown RBP7.43□□□□□ -1.22
PTPRD-206ENST00000397617 BACH2Q9BYV9 841 aa7.43□□□□□ -1.22
PTPRD-206ENST00000397617 VIRMAQ69YN4 1812 aaKnown RBP7.43□□□□□ -1.22
PTPRD-206ENST00000397617 TRHP20396 242 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-206ENST00000397617 DAXXQ9UER7 740 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-206ENST00000397617 HMMRO75330 724 aa7.43□□□□□ -1.22
PTPRD-206ENST00000397617 IGSF3O75054 1194 aa7.42□□□□□ -1.22
PTPRD-206ENST00000397617 PDIA4P13667 645 aaKnown RBP7.42□□□□□ -1.22
PTPRD-206ENST00000397617 COL15A1P39059 1388 aa7.42□□□□□ -1.22
PTPRD-206ENST00000397617 FAM161AQ3B820 660 aa7.42□□□□□ -1.22
PTPRD-206ENST00000397617 CDCA7LQ96GN5 454 aa7.42□□□□□ -1.22
PTPRD-206ENST00000397617 UPF2Q9HAU5 1272 aaKnown RBP7.42□□□□□ -1.22
PTPRD-206ENST00000397617 SLC26A8Q96RN1 970 aa7.42□□□□□ -1.22
PTPRD-206ENST00000397617 CCT4P50991 539 aaKnown RBP7.42□□□□□ -1.22
PTPRD-206ENST00000397617 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
PTPRD-206ENST00000397617 VAMP4O75379 141 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 ARHGEF25Q86VW2 580 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 GNAI3P08754 354 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 FTSJ3Q8IY81 847 aaKnown RBP7.41□□□□□ -1.22
PTPRD-206ENST00000397617 NLRP6P59044 892 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 BCANQ96GW7 911 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 EIF4A2Q14240 407 aaKnown RBP7.41□□□□□ -1.22
PTPRD-206ENST00000397617 RBM19Q9Y4C8 960 aaKnown RBP7.41□□□□□ -1.22
PTPRD-206ENST00000397617 PARP4Q9UKK3 1724 aaKnown RBP7.41□□□□□ -1.22
PTPRD-206ENST00000397617 ALS2Q96Q42 1657 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 ZBTB40Q9NUA8 1239 aa7.41□□□□□ -1.22
PTPRD-206ENST00000397617 NME9Q86XW9 330 aa7.4□□□□□ -1.22
PTPRD-206ENST00000397617 LMO7Q8WWI1 1683 aa7.4□□□□□ -1.22
PTPRD-206ENST00000397617 CANXP27824 592 aaKnown RBP7.4□□□□□ -1.22
PTPRD-206ENST00000397617 HEG1Q9ULI3 1381 aa7.4□□□□□ -1.22
PTPRD-206ENST00000397617 ATP10DQ9P241 1426 aa7.4□□□□□ -1.22
PTPRD-206ENST00000397617 SSH1Q8WYL5 1049 aa7.4□□□□□ -1.22
PTPRD-206ENST00000397617 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.22
PTPRD-206ENST00000397617 MAP3K5Q99683 1374 aa7.4□□□□□ -1.23
PTPRD-206ENST00000397617 TRPM3Q9HCF6 1732 aaPredicted RBP7.4□□□□□ -1.23
PTPRD-206ENST00000397617 SMC4Q9NTJ3 1288 aa7.4□□□□□ -1.23
PTPRD-206ENST00000397617 AMPHP49418 695 aa7.4□□□□□ -1.23
PTPRD-206ENST00000397617 AOX1Q06278 1338 aa7.4□□□□□ -1.23
PTPRD-206ENST00000397617 BMP2KLQ5H9B9 411 aa7.39□□□□□ -1.23
PTPRD-206ENST00000397617 ANP32EQ9BTT0 268 aa7.39□□□□□ -1.23
PTPRD-206ENST00000397617 PLEKHO1Q53GL0 409 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-206ENST00000397617 CRB1P82279 1406 aa7.39□□□□□ -1.23
PTPRD-206ENST00000397617 HSP90AB4PQ58FF6 505 aa7.39□□□□□ -1.23
PTPRD-206ENST00000397617 TNS3Q68CZ2 1445 aa7.39□□□□□ -1.23
PTPRD-206ENST00000397617 MARF1Q9Y4F3 1742 aaKnown RBP7.39□□□□□ -1.23
PTPRD-206ENST00000397617 MTX1Q13505 466 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms